Contig Data
morexGenes
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Map Locations of contig_1571366 (3250 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1571366

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15701 1 2478 bp MLOC_15701.1 Available Available LOC_Os03g38800.1, FRAME:+1, EVALUE:0.0, 13103.m04212 protein AAA family ATPase, putative, expressed





CDS Structure of MLOC_15701






Contig Sequence (3250 bp)

>contig_1571366 3250 assembly3_WGSMorex_rbca.fasta
ATTTGCTTGGAGTTTCGGGATTCGTAGCAGTGGTATGTAAGTGGGGGTGACATCACAAGT
GAAGTTCAAGGTCCTATCTTTCAGGATGAAAACCCAAGATCTACGATCTGGCGACGACGG
TGCTTGTGCACTGTTTCCTTCTTGGAGGCGTCGTTTTTGGAGTACTTAAACATCGGGTAT
TGTCTTGGTGGTGGTTGTGCTGCAGTTGCAAGTACTGAAACTCTGTAGCGGGACTTTTCT
TTTTAGTTTCTTCTTTGTTTTTTGGCTGTGTGCATCTCCTTGATATTAATATATACTCTT
TGTTGAAAAACAAATTTGTTGTTGGATAATTTTTCTCAACAACAAATATTTAGGTGCAAA
AAATAAATTTAAAAAGGAAAGAGTAGAACGTATAACAATCAGTTTCCGCAACAACGTGCA
AGATGTCATCTAGTTTTACATATTTGTGCATCAAATTGATCGTAGCCGGCAAGTTGTTTG
ACTCCCCGTGTATTTGCCTCTTTGCTTATCTCCACGACTTTTTACAGCCGGTGACTTAAT
TAAATCACTGGTGGCACACTGATGCGATCATACGCGGCCGAAAGATGTCCTGTGCTGCAT
CGGACATGATCGAACATCCGACATGAGCCAGCTTTTCCGAGGTCTCTCATTCCACTCCAA
GATTCCTTCACGCATGTGAAGCCTCTTCAGACTTCAGCAAAGGTAAAATAAGTGGGGGAA
ATAATTCCAAATGAAATGAAGGCAGCACGAATTGAAGGACGATTAGGAGTACTGTATTAA
ACATAGACGACTCAGTTGGAGTCAATCGGCCGACACATTAATACATCCTTTATGGGACCT
TCCACGAAACAGCGCCGCTTCGGTGGTAGAACTTCGTCCATCATAACTGGAAATGAACCC
TAGAGAAGAGAACCAGCAGTAGTAGTAGTACATATAGGAGGCGTGGAGCACACTCGTGTT
CGCAACTTCGCACTCATGGATAACTTGCCACTGACCACCATGGCCGGGGCCGCGGCGTCA
TCGTTGGAAGGAGGCGGGAAGGTGGTGGACACGTACAAGAAGGCGCTGGGCACGGCGGCG
TCGGTGGCCGCGTACGCCATGCTGGTGCGCAGCATGGCCAGGGAGCTCCTCCCCGAGGAG
CTGCGCGCCGCGGTGCGCTGGGGTGCCGCGTTCGTGCGCACCCGCCTTGGCGCCGGCGAC
AAGGAGCGCCACACCATCGTCATCCGCCGCCACTTGGATGCCGGGTACAACGAGAACCAC
CTCTTCGAGGCGGCGCGCGCCTACCTGGCCACCAAGATCGATCCGACCGCCATGCGCCGG
CTCTGCCTCGCGCGCACCCGGTACAAGGAGCCCGACGGGAGCAGCAGCTGGAGCACACTC
CTGTGCATGGACGATGGGGGCTCCACCACCGACGCCTTCGACGGCGTCGACTTCAAGTGG
ACGTCCATCGAGACCGGCGGCGACGAAGGCAAGAAGGGAAAGGGACATCGGGCCCCATCA
GTACCACGCGAGACCCTCGAGCTCAGCTTTGACGCCGAGCACGCGGAGGCGGCGCTCGAG
CGGTACGTGCCGTTCATCATGTCCACGGCGGAGCAGCTGCAGCGGCGGGATCGCGCGCTC
AAGATCTTCATGAACGAGGGTCGCTCATGGCACGGCATCAACCACCACCACCCAGCCACG
TTCGACACGCTCGCCATGGATCCCGCACTCAAGCAGGCCGTCACCGACGACCTCGACCGT
TTCCTGAAGCGGAAGGAGTACTACCGGCGGATCGGCAAGGCTTGGAAGCGCGGCTATCTG
CTCTTCGGCCCACCTGGGACCGGCAAGTCTAGTCTTGTCGCCGCCATGGCCAACTACCTC
CGGTTCAACCTCTACGACCTCGACCTCTCCGAGGTGCGCCTCAACTCGGCGCTTCAGAGG
CTGCTTATCGCCATGCCCAACAAATCCATCCTCGTCATCGAGGACATCGACTGCTGCTTC
GACGCCAAGTCGAGGGAGGACCGCACGATGCCTGTGCCGGCCGACGACGGCACTTCATCA
GACGACGACGTCCCGGAGGACAAAGCCCACCACCCGGGACCGCGCCAACAGCAGACCATA
ACCCTGTCCGGGCTGCTCAACTTCATCGACGGGCTGTGGTCGACGAGCGGCGAGGAGCGC
ATCATCATGTTCACCACCAACTACAAGGACCGGCTTGACCCGGCACTGCTGCGGCCGGGG
CGCATGGACATGCACATCTACATGGGCTACTGCTGCTGGGAGGCGTTCAAGACATTGGCC
AGGAATTATCACCTCGTGGACGACCATGCTCTGTTCCCAGAGATAAAGGAACTGCTTGCA
GCGGTGGAGGTGACGCCGGCCGAGGTGTCCGAGATGCTGCTGCGGAGCGAAGACGCCGAC
GTTGCGCTACGGGTGCTGACGGAGTTCCTCCAGGACAAGAGACGCAAGGCAAGAAAAGAA
GCAACAGAAATCAAGATCGGCGTAGCAGAGAAGGCAATGTAGCACTAGTATTCTTCAGTG
TCAGCATCCCCATTAACTCGGAGCATTTCATTTGAGTAGACTAAGTGATCGAGTATGTGT
CACAAAGGTAATCATCTATGCGGGAATAATGAGGCATCAATTGAACAAGCTGATGTATCT
GTTACAAGTAAAATTGGAAGTCATTTGCCAGGAGCTTCACCATCCATGGGCATCAACCAT
CAATAATTGGCCCTTACGACTCTTCGGCTACGCGCCCCCGCATCTCAGCCCGTGTCGCTC
CAGGAGCGGCACGGGCGGAATCCCAGCGCCGGCGCCTCCTCTCCCCCATCCTCCCTCCCT
CTTGCCGTCGCCAGCGCAGGCCAGCGGCCAAAGCCCCCTGGTGGCTATCGGCGGCGGGAT
CCATTCACCGCGCACCCTGGTGGTAGAAGGGCGACTCGGATGCTTCGTGTTGGCGGCTGC
TCACGCAGGCCCTGGCGACGTAGATCCGTCCCCTGCCAGCGCTCCGGCGGCTCCTGGCAG
CGCGGATCCGGCGGGTTGCGGTCGAGCAGACGGCTCCCTCACTTTAAAAAAGGAAAAGAT
CTGGTTCAACCGGGCTGATGTACCTCCTGCGATCCACCTCCTCACCTCACGCTTGCGACA
CGTGTCCCTGCAGGCACCAACTCGTTCTTATCTCCCCGGCCCCCCTCCCGTGAGCCCACG
CTCCTCATCCTTCTCTTTCATATCTTCTCTCCTCCACCCGTCTTCTCCAGGCTTCCTCTC
CCTCGCCTCG