Contig Data
morexGenes
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Map Locations of contig_1571319 (6869 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1571319

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15684 5 1858 bp AK375720 Available Available None
MLOC_15685 1 1181 bp AK354081 Available Available None





CDS Structure of MLOC_15684






CDS Structure of MLOC_15685






Contig Sequence (6869 bp)

>contig_1571319 6869 assembly3_WGSMorex_rbca.fasta
CACTTTGCTTGTGCCCAGGCCCATTCCCGCTATGACGCTGTGTTGGTAATTGAAGAGAGG
CTGTCACTGGGGGAAGTCGCATTAACATGCGATGTGGATTGGTTGCATTTAGTTTCATCC
AAGCAGGGCATGAACAATGTGCACAAGGATTGGTTGTACTTGGCTGTGAATATGGAGGCA
TGGAAGGGGATGACATTGGCGTTGGAGATGAGCTAGGAGCAAATGATGGAACGAGGGCTT
TCAGACGCGGAGCCAACTTGAGATCCTTGATTCTACCAAAAACCGATGTGTCTAGGCCAA
GGTTCCATGAACTTGATTCTGTGATGATTTCAGCTAGCTGTTTCAGCCTCCCTATTTGTT
CGTAAATGCCGCGATCATCTGGGGACAGGGAAACTTGAACTATAACTGGTGGGGCAATCG
TTGAGCCATTCTTATTTGTTAGATCTATGTGTATGTCCTGCATGTAGATAGCATGTTGTC
ACTTTATGGCATGATCTTCTAGGAAAGATGTTAATCAGAAGAAGGGAAATAACATACGAG
ATATAGAAAAGAGGGAAGCTCATATGGTACCTCACCCAGTAAATGCCCAAGATCCTCCTT
CATTTGGTCAATCAGTCCCCTCAATTGGCGAATGCTCATGTCAAGCGTGACATTGAAAAC
AGGCCGCGCAACTTGTGGAATGAAATTATGTTGTAGGGGTTCAAGTTCTATCGTGATCCC
TCCTGGGAACCCAAGCATCTGTACGCACAACGGATCTCCGAAAACCGTCGGTGTCAGCGA
TAAATTCAGCTGCTGAAGCGTAAGCTGGATCAAGTTTTTCCTCAATGCGTGCATGGATCG
TGTGCTTATAAAGGTGTTTATTGGGTCAGGAAGAACATCAAATTCTACCACGGTGCAACT
CATGAATAATGCCTGCATAGAGACGGAAACCTGCAGAATTGCCCCGGTCAGTATTCAGTA
AATCTTCTTGAGTGGCTTTATTAATTTGGGTTGGTAGTGGTGGCATACCTTAGTGTTGGG
TACTCCAATTTGACGGTTGATCTCTTGTTGCAGCTCGGCGGCATGTGGAGCGAGTTCCGC
GAGTGGCCTCAACAAGATGAAACCAGCCTGAATTTCATCTGGAGAAGTGAATGTTTTGTC
GTCAAAAGATAAGAACTGCTGACTGTTGTAGCAGATTGTTGGCTATGGTTGATTGCTGAA
GGAGGTTCTCGTTTTTCACTATCTAGATTCATGACATGTTTCCTATCGAAGACATGGAGC
TGTGGAAGGCACGCATGGCTGGAGGTAGCTGAAAACTGGCGCCGAAGATTACCGATGAGT
GTGCCGGGGTCATCAGGCAAGCAGTTCCCCGGTGATCGGAGATGAAGGAGCATGAAGAAG
GCCGAGAGGAAGACGACGACGCCGAGGACCAACGCGACGACGCACTTTGCGCTGAGCGCC
GCGCCCACTTGAGCGGCGCATCGGCGAAGCGCGGAGCCGTTGCTGCTGGTTGACGTATCC
GGGAGGTGTCCAGCCTGCTCAGGGTCACCGGCTTTCTTGCCCATGGCGAGCGCATCTGCC
ACAGCCACAGGTCTCTCTGGCTCCGAGGCTACTACTCAGTGCAGGTAGAGACCATCAGAC
CGGGAGGGGGACTGCTGAGGCTGCGTTGCGTCCGGGATCAACCGGAAGGCCGGCGGTGGG
TGCTCGCCGTGGCCGCACCGGTGACGTGAACGGGGCAGTAGACCAGTAGAAAATCAAAGC
TGGAGGGCAGTAGTAAAACCGAAAATCAGGCCTTGTGAACACCGGTGAGTGGGTGTTGGG
GACGGCGGATGGGAGTTGGGAAGGGTGACACAGCATAGGCCGGCTGTTTTGACTTTTGCT
CGTGCTTGCAACTTGTTCTATAATTTGGTTTGTTTTCTTGCCAGAAGTGTTCTTGTTGGC
ATCTGAAATCATCATCGTTTGTTTTTGCCATATGTTAATATCGCCCCTCCCCTTGGATCT
CGACGTTTTTTTTTTGCTTGTTAGCTTCATTTTGTTCGCGTTCATATCTGCTCGGGCGTG
TAGTTTTGTGCCAGTGGAGTCCGAAAGCAAGGCCAGTTAGCAAGGGTTGCTACCATAAGC
GTACAAGGACGCGTCATGTGAACAATGGCATGCTACTAAAATGATTACCGGTGGTTACAA
AGGCAGCAATCTGATTTCTTTTTCGCAACCACCAACTGTTCTTTTATAAAGAGATACGGC
ACAGGACTAACACCACGGTTTACATTACGATCCGTCCGTCCCCGACTCGTCATTATCGAT
AGGAAGGAAGCATCAATCAGTGATACAAAAGATGAACAAGACAAGAGTGAAGATAGCAAG
AACAGTTCCAGCCAAGGTATACTTCAGGGTTCAGGCTTGTCTCCACTCTCCAACCTAGTG
CAACACAGCGGGAATAGATCATGGTTACAGCACATACAGTACAAGTCGTGGGTTATCTAA
ATGTTCAAACTAAACGTGACGAGACCATCTCTTTTCCCCCCGAGGGTGAACAACAAACGG
GGCTACGGCGCAACATCACATGAGTTTAATCTAGATGAGCTTCTTTTTCCTGAAGTAGCC
TTGAAGGTGCCACAACTGCAAAACCGAAACCACCATGCAGACGCCCAGCGACAAGATGCT
GAACCAAGCAACCCTGGCGTTTGTTTTCTCGCTCACCTCCCTCATCTCCGCTTCCCTGCA
TGGATAAATCAAAGCAGTCACTGGCCTGTACCGCCAATTTAAAAAGTTTCGCAGGACAAG
CGACCGCCAATTTAAAAAGTTTCGCAGGACAAGCGACCGCCAATTTAAGAAGTTTTGCAG
GGCAAGCGTTAAGACATTTTTCATGTCATAGGTGCTTTCAGGATAAGTGTTGAGACATTT
TTCATGTCACAGGCGTGTTCAGGACAAGTGTTAAGACATTTTTCATGTCACAGGCGCGTT
CAGCACGAGTGTTGAGACATTTTTCATGTCACAGGCGCGTTCAGCACAAGTGTTGAGACA
TTTTTCATGTCACAGGCGCGTTCAGCACAAGTGTTGAGACATTTTTCATGTCACAGGCGC
GTTCAACACAAGTGTCGAGACATTTTTCATGTCACAGGCGCGTTTTCAGGACAAGTGTTA
ACCATTTTTTAGCGGGCGCCAATTATGTGCCAAAAGCTTTAGAAATTTAAAAGCCCCAGT
TCAAGCAATAAATGATATTGCCTGACTTATGTAAAATGTGGAAGACTTGCCTTGTTTTGA
GGTACACCATGTTCTGATGAATCGACTCTACAGCCACTTCAAGCTTCCTAAGTTCTAGTT
CTACACCCTGCACCGAAAATATTTAGATTGCACACAATTAGTGACATGAAGCAACACATG
AAACAGGAGCTGAATGAGACTTGGACTGGTCAGTGGCTTGGCAACTCATAGCCCCACCTC
TATTTTTTCCTTCTTGGCAACAGCATCCCAGTCCTTTGTTGCAATCCCAGTTTTCCAATC
AAGATTTACAGATATTCCCGATCCTTTCTCTGCACTATCTATCCAGAAGCAGGCAAGGAA
GTTTCCAGCTTCTGAGGTTGTGAATGCAAATTGACCAACTGTAGCATTTCCACTCTCATG
TAAGGTGTACCCATATGGTGAAGTAACCTGCAGAAAGCAGAAGCAATTACAGAGCTGTAG
CAAAGGAGAATGCAACATTATGAACAAGCAAATTCAACGCGGTTGGACTAGCACTATTTC
CTCCACTATTGCACTGCAAATGATCTTAACAAGCAAAAAATGATAATCAAAATCTGGCCA
AGTTAGTGATAAAAAGCTGACAATTCATTCATCCGCTGCAGAACTAAGAAAGTACAAATT
GAACATGCAGCACAAATCAAAGTTAATTTTCGAGTCACAATAAAAATATTTGATTATGCT
TTTAGGTAGTTTTCAGTTATAGTTACAAACAATGGACCATGGATGCAATATATCTGATCA
CGAAATAAACACCTCTCTTCACATAATTAAAGTTAGAAGAAACATATATGTCCATATAAA
GTAGCATCAAATGTCTACTTGTTTGCAAGCTTGCACATTAAGTCTGCCCTTTATTTAAAT
TGCTTTGTCATTCCTTTTGCAACGATGCATTCTTATTAAATCACCTTTTACGCCTCGCAC
CCACAGGATGTTATAAATAAACAAGTCGGCAGAAAAGCAGATTTGGAATCCTGTGAGCCG
AATCACCCAGTTTATATGCCGTGGCGAGTGATGTCCTGGAAGGAAACCACCATGACTTTA
GACAGAAGGAACCACCGAATCAGCTTGGTTCAGTTAACCCGATATAAATCTAGTGATCTC
ACCAAGCAACCCTGCGTCATCAACGTGAGTCAAGCAAATCTAATCTAGTAGTTTAAAGAA
ACAACCAGATATTCTACTGCCGTCATATCGCACAATGCAACACATATCTGAATATACTGA
ACTGTAGGAGCACCGCAACCGTACGGCGACATCATTCACACTCACTCCAGTTCCAATTAT
TAACCATAAATCTGCGTGCCGCGGCTCCCTCCGACGCGCAAATCTACCGCGTGACCGACT
CGATTCGTCCAGATTATCGATCCAGGATGAACGCAAACAATCCATCGCACGGTGGAATCT
ATCTGTATGGAGCACGGGAGGGGCAGGCAGGGACGGGCTTTACCTTGACGGCGAGGGTCG
GGTGCGAGGAGGGGTGGGACTCGTACATGAGGGCATAGTCGGCGAGCACCACCACGTTGG
CCTGGATCTCCTCCGACACGCACTTGGTCCCCGTCTGCGGCATGTCGAGCCACACGGCCT
CCGCGCAGATGGACGCGACGGCGAGCAGCACGGCCGCCGCGAGGGCCCGCGCCGCCGGCG
CGGGCATCGCCGCCGATCTGGGAATCTCCGCCGCGCGGTGTCGGGCTCGGGGCTTTGGGG
AGGGAGCTGCAGCCGCGTGGGGTGGGCGATGACTTGACGGGTGGGAGGCTCCTGGCGGCC
GTGCTACGGCCTACGGTGATAAGCTAGGGGCGTCTCCGGAATTGTTTACTTCTCCTGAGG
GGTGCAGGTGAAGTTGTCTAGTTGTTGTGTAATGGGCTGATTTGTTTTTTGAGCAACTTG
TGATGGGCAAGTGGGCCCGGGGACAGGGAGTTTTAGGCTTTTAGCTCCCAAGCTCATCAT
GAGTAAACAACAATAAATTGCCCTAAAAAAGAGTAAACAATAATTTTTCTAAAATAATAA
AACACTGGAAATTCGGTTTTTTTTGCAAAAAAAACTTGATTGTCATGCATTCTTATTATA
TTTGGTGAAAAATGACATCCATGGTGCTATGTAAGAAAAGGAAACATGTGCTCCGAAAGG
GTTATTTGTTAAGTTTTTTGGAACACCATTTTTTCCCAGAGTACCATGAATATCATTTTA
TCGAATTTTTTTTGCACGTAGGTATAACACTCGGACATGTTTGTTGTACAATTTTTTTTT
CAGTTTTTTGGTTGCTATTTTTCTTAAATGTGTTGTTCATCCATCACATATGACTCAAGC
TTTTGCTGCAGCGGCAGTCAAAGCTGCCGTAATTACTTTGCTGGGATGACAACCCCAAGT
TTTGTTGGAAACAAACATACTATTTGATCATGAAGATATTATTCACATACCCAATTCATG
CTAGATTTGTCTTCTTTTTATTGTTTGTCCATGTGGATTTAAATACGTATTTGAAACTTT
ATAGATTATACACACATATCTTCATAATAGTGTCGGAGTCAGAACTTCTGTGAAGCCTGA
GCAAACTTTGAATCTAAATGTCTATTCCAAAAATCAAAACCAGGGCACAACATATAAAAT
AGGACCAAATAATTAATGTTTCCGTACACAACATATAAATAACACCAAACAATCCGATAT
TCAAACATCTTGGTTTACACGGGCGACAGAGCTAAATCTGCTAGGTCTCCGGTAAGGGGT
CCCGAGCTAGTGATTATAGCTTAATGGTAACATGACGAACTAGAGACACAATGTTTACTT
AGGTTCGGGCCCTCTCAAAGAGGTAAAACTCTACATCCTGCTTTTATTGTATAAATTGCG
TTGGAATATAAAGTATAAGATGACCTACCTCGAAATCGTATGTGTACGAATCTAATCTAA
CCCTACATACTAAACCCTTCGGCTTATTAGGGGCCGGGGTCAAAGGTATTCATCTTGAGT
ATGGCTGGCACCATGATAAATATGTCATCTTCAATTGTGTGGGGTTCGACCAATGATTGA
CAGGCCGACATAACTAGCACCCCTATTTCAGGGCACCGTTAACAGGTGCTTACGAAGGGG
TAAGCAAACTTTGGCTTTCGATGCTAACCCGCACTTACAAAAGATAATTGTTATCCTAAT
TTCACGGGTGCTACAATCAGTCATTATTAGACTTGTAAAATGCAAGGTGTTTAGGACAAG
TGCTTAGTAAAATAAATTGATATTTTTCTCAAGAAATGGTGTTTATCTTTATAACAATGG
GTGCCTAATTAAGCAACTATCCGTTATAAACAAACACCGGTGCTAAAAAATAGATATATT
TTTAAAAACAGCCCAATTGTACAAGGCCTTAAGCATCAATGTGAACTTATGAAGAACTCT
GAAAATTTATTTTGAAATGTGATAATATTCTCTCTCAACCCCGCAAAAATAATAGTAATA
TGCTCTCTCTTCAAGCACGAGTGCATAAGCATCCAACACTATACAAGGCCTAAGCGTGCT
GCTCACTTTGGCTAAGATTTGTCATCGCCCATCGATTACACCTTTTCATTCGACTGTATA
GTACTCCTGATGGGGTTATAGTCCTAGGNNNNNNTCATAGGCCTGCCCTATAAGTCCTAT
CCAAGGACTACCCTTCATACGGGATAAGG