Map Locations of contig_1571238 (2939 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1571238

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15658 4 1105 bp None Not available Available None





CDS Structure of MLOC_15658






Contig Sequence (2939 bp)

>contig_1571238 2939 assembly3_WGSMorex_rbca.fasta
CGTATGTAGACCCTTAATGAAATCGCTTAAAAGACTTATACTTAGAAACGGAGGGAGTAC
ATACGAAACAAAACGAATGAATATACACTTTAAAATATGTCTATATACATCCATATATAG
TTTATAATGAAATATTTTAAAAAAATTATATTTTAAAATGAAGCTCTGTTCTAAAATTTG
TCTAAAAACGAATGTATCTAAATACTAAAATTTAACTAAGACATATATATCTAAACAAAT
CTAAGATAAGCAGTAGTTATTAAGGTATCAAGGGTCGGTTTTAACTTGATCGCGCAGAAT
TGGAAGGTTTTTCTACCTGTCGCATTGCCGCAGTCCCTTCTCGTCGATACGGGACAGTTG
GTACAGTAACGGGCCCCATGACAACTGCGTCCAGTAAATCCTCTCTGTTAAATTACTCTA
CTTACTAGTCCATTCTGCAACCACAACACAGCACGGGACAGTCGTCAAGACTTACCACGG
AGTCCTCGGGTGAAATCCAGCTATCCCCCAGGGCCACGCCTGCATGCGTTGTAGTCAATC
AATGGATTATTAATACAGTACTAGATTAGCTGCTGCATCATGCATGATGGGATACCTCAT
CAATGGATTTGCAAAGCTACTGTACCTCCAAGCTTGGCGTTGAGATGTCCCTGGCGGATG
GCCCTGAGCGCGGCGAGGGCGGTGGTGGCGGCGAACTTGCCGCCGTACGACTCGGCCACG
ATGTAGAGCGGGCTCCCCTGCAGCAGCTTCTTGTGCCGGTAGAGCTTGATGAGCAGCGCC
GTCAGGTCGCGCGCCGCCTGCCCGTCCGTTTGCGCCATCAGGCTCTTGTTGCCGCCCTCC
ACGAAGCTGAACCCCGTGCCCACTGGGTTGTCCTGCACGGAGCAATCTCAGAAATCAACA
ACTAACCGGCAATGGCCATTGCCAAGCCCCACGCGAGGAGGAGGAAGAAGAAGAAGATGA
ACATACGACGAAGAGGAGGTCGGCTTTGTTGAGCCAGGTGGTGGCGCGGGGCTTGAGCTC
CGTGTCCAGCGGCCCGATCTCCATGAAGTTGCCGTAACCCACCCCCGAAGCGCCCTGCAA
TGCATGCCAGATTGAATCATCAGCATGCTCATCTATGGAAGATTCTTTAATTCAATACTC
ACCGGGCCGCCCTGCAGCCACAGCACGGTCGGCCATGGCGCTGTGTCGTTGTCGACGCGG
TGGGGGCTACGGTACAGCCACCAGAACATGTGCGCCTCTGCAGAGTTCAATTGTTAACCA
CGCCACCATGAATGAGCTACAAGAAGAGGAAACACTGATTCTCTTACTCGGCCGGACTTG
CACGTATCCCCACTCCTCTGACCCATCGGCGGTGCCAGCGGCGGCGGCGCCGAAGGGCAG
GAAGAGGAGGAGGGCGACGAGAGCGACGCCGGGCAGCAGGAGCAACCTCGCCGCTGCCAT
TGTGGTCGACAGGGACTCGTCGTCGACGACAGGAGCAGGACAGGACGCACGCTGGAGCAC
GAGGCCGTGTGGAGGTGGATATATATGGTGGTGCTGGGACGTTGTACACGGTATACGGGT
AGTATAACAAGGACACCAAGGAGGGAAAATTCGTTTGCGTTTGTTTGTTGGAATCCCGTC
CAGATGACACGACGTGTAAACTACTCCGATCTGGACTGGAATAAAATCTAGGTAACTCCT
CGCAAGAATCCAGGAGGTATGGGAGCCGCTGCCGGCCGGACTTTCCCAATACGTAATCGG
AACTGCCTTCCGTTCCAAACTCTCATCTTCTTATCTCATGAAACGGTTCTATCGGTACCA
TAACCATACGTGTACATATACTCGAGACTTCAGAGGGACATAAATGTTATTTTCTTTTTG
CGGAAACGAGGGACATAACGGCATCTTTAAAACGGGTCCGCAAATCTTTCATAACCATTC
GGATCACGAAAATCATCAAATGCCGTTGTCCATGGAACAGTTTGAATGTAATTTCTCCCA
TAAATCAGAAACAAATGTGGGAAAGGTTTGCGAAAGTTCGAACCGATACTTCGTGTGATT
CTCACCGTCCTGGCCAACCAAAAACCCCTTCTTCTTCCGCGCGCTTCCCGCCAGACACGA
GCTGCTCGCATTCATGCCGTTATAAATCAGGCTGCTCAACATTGAAGGCGGCTAAGGGCG
GACACGACCACTCACTGCCTTCGTCATTGAAGCGGCCCACCGACCGAGGGCACCGACTGA
TGCACGTCCGCGTGAACAAACCCTCGCCGTATTCAAATGCCTTTATTAAACCCGTGTGGA
AGCTAACAAACCTACTCCGACCACACATTTATTCATGAGTGAGCCGACACTAAACGCAAC
CCCGGCCGGCTCCTTCCATCCGCCCTCTATTTAAACGAGGCCACACGCCGGGCAAGAATC
ATACCCCTCCGCCGCTCCCCATCTCCTCCTTCATCATTTTTCCACTCTTTTGATGGCTTT
TCAAGAACAGTTCTCCGACATACAAGCCAGAAGGGTAGCCCGTTGATCCTGTCGGATACG
AGCACGCCCAAGGCAGCTCGCTGCTCTGCCTCCCTCGCCTAGCCTGACGGAGCCAATTGC
CGCTCCAAGTTGGCGCGTGGTTCAGCAACTCGTCGTTCCAAGCCAGCTCGATAAGGAGTG
GTGAGTTGCTCCACGCCGGCATGGCGGGTTGCACAGCGGTGATCGCGCCTTCCGTGCGTG
TGGCTACGCCATGCGGGCAGAGACACAAGCCGAGTGTGCGGAAAGCGACGAGTCGGTGGC
CAGTGCCTCCGCGTCCCTCACCATCATCGAGGAGAAGTAGAACACAGGAGGCCGCCGACA
TTTGGGGGGAGTACGTTCGATGGAATAATTTCTTAGATGTATTACTATAAGTGCATCTAG
TGCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNTATAGGTTAAGTACCTAATGTGTTTGT