| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location | No map location |
Predicted Genes from contig_1571063
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_15586 |
6 |
2821 bp |
MLOC_15586.1 |
Available |
Available |
LOC_Os06g18820.1, FRAME:-2, EVALUE:4e-82, 13106.m02009 protein serine threonine kinase, putative, expressed |
| MLOC_15585 |
2 |
2483 bp |
MLOC_15585.1 |
Available |
Available |
LOC_Os06g18830.1, FRAME:+3, EVALUE:0.0, 13106.m02010 protein AGC_PVPK_like_kin82y.13 - ACG kinases include homologs to PKA, PKG and PKC, expressed |
CDS Structure of MLOC_15586
CDS Structure of MLOC_15585
Contig Sequence (10321 bp)
>contig_1571063 10321 assembly3_WGSMorex_rbca.fasta
TACCACATGGAATATAACTCTCATTCAAAGACATGATGGACCCACATACAAGAAGGTTCC
AAATATGACAAGTTACACTCTAGGGCATTACACGCACTCCGCGAGAGCGAGGAGGAAGAG
CGACACAAGGTCGAGGAAGAGGAGGCGACGTACGAGGCACACTTTGTGGAGGCCATCGCG
CTGTCCGTCGCCGACGACTGCATCGTGCCCCCTCCGCTGAAGACCGAGCCCACAGAGCCG
CAACCACAGGTCTACGAGTGGACCGGCTGCCTCCACGAGTGGGTCAGCGCGCCGCCCATC
TGGTTGGGCGCGACACTGCAGCAGGAGGCCGCCTACCTCGAGCATTGGAGGGCGTTGCGC
CTCGCGGAGGAGCGCGTCGGCGAGGCGCGACAGATGAAGCTGGAGCGGGGAGCGGAGGAG
GAACAACTCGAGAGGGAGGAGGAGGAGCACGCTAGTGCTGCGCTACCGCCGCCACCGCCG
CCGTGGGCACTGCCCGCGTCGGCATAGCCGGCCCCCAACACCAACGCCGTTTGGGACATG
CGTTCCCCTCGGACGGTCCTACGCCGACGCTGATCAACCTCACCTATCCCGACGGCGATG
GCAAGGACGTCTAGGGTAGCGCGTAGTTTAGTTTAGTTTTATTGTTCAATTAATGTAATA
GGGACGCGTAGACTCTCGCCAGCCCTCGTGACCGGCTTTAATATTTAATTTATGTTTGTT
TTTATTTTTGAAAATATTTTTTTTATTTAAGCATCGTTAAAATGGATCGAGCGTTAGATG
CATGTGTCGATCCAAACGCAAAAGGAAACATTGTTGTTCGCCGAACCCATCCAAACAAAC
AAAAAGACAAAGACGCCGTCAGGGTCGGCCGGTTGGAACTGTGTGTCTTTGCTCTTGCGC
CAATGCTCTTGCACAATTTTCTTTTTTAAAAGAACCCGGCGAGATGCCATTTGTTGTGAC
CGTGACTTTGTGTCAGTAAGTGTAAGATGTAAGAACGGTGTAAAATAGAGGTTAAGATTG
TTTGTAATATAAATGTTTGATTTTATTAATCCCGTGATCGTTACCATAAAGAAAACGATT
AGGACTGTTTACTATCATAGTTTTTCATGTATGATTTGAACTTCTACATTGGCCAATCCA
TAAAGTGACCATGAATGCTGGATGAGAGTGCCAAACACTGTACCACATCCATACGGACAA
ATTACGATTCAAAAGATTCGAAGAAGAAAACAGTGAAAAAATGTACATCTAGCCTGCATG
ACTCTGACCATGTGCAGCCAAATTTACCCCGGCACAGACTGTACCCAAAGCTTCGTTTGC
ATGCAGTCCTGCAACCGGCACTGCGTGTGTTTTTACAGTTCTCTTTTACAGAAGCTCCAT
AAAATGCCCCGCCTGAGCCGTAAAACTCCGGCATAGGGCCATTTTTTTAATTTTTTAGTC
CAACGTGGTTCTGCATTAATCCGGAAAGTGATTCGGATGTTCATTTTTTCAATAAAATGA
AGTTAAAAAAGAGAGATATATCGGAGTCCGGGTATCCACTTGACCCATCAAAAGGCTCCA
TGTGATTCTTTTTTTTTTCTCAACACATGCATGGTCTTCCCTTTTTTTTGTTCTTTTTAA
CGGGACATCACATCACAATAATTCACCACATACATGATCCTCATCTACTTTCTCCGTGTA
ATGTCCGTGGATCAAGTCCGGACATAAAAATGGGTACATACCGAAGGCTTTTAAAGGTTG
GTGTTGGAGATACCCTTACATAAGCTTTTATAACATCCCCATCATATATGTTTATTGAAG
AAATATGTACTTGGATAGTTAGAAGGACAGTGGTATCACCAGCCCACTAGGTTAGAAGGA
CAGTGGTATCCTCAGCTTTTATAACACCCCCATCATAAACAATGCATATTATTCTATTTT
TTTCTTGTTTAAACTACAATACAATTGCACATGCCCACATATACTCAACTTATGAATGTA
CTCTTGCATAACGTATCTCTATGACCGCCTACGAAATACGGAGATGATGTCACCTCCTGA
AATTGACCAAGTTAGTTGATGGAAACGTCTACTCTCACTAAAAAGCAGCGACGAAAAGTC
TAAAATAAATTCAACCAAATTCTTACGATTTTAATTCCTGGTCACGTGGAATTTTCTTGT
CATGGGTTGTAAACGGGCGCCTGCCTATATTAATTTTGTTGTGTAAAAAAGAAGATTTTA
TTTGGTAAGCAATTATTAACTTATTAAAAATTCCTCCCTATTATATGATTGTGTAAATAA
ATACCCCTTCCTTTCAAAAATTGTTGCCTTAGATTTGTCTAAATATGAATGTATCTAGGC
ACATTTTAATATTTAAATTCATTCATTTTGGACAAACCTAAGACAAAAAAATTCAGGAAA
AGAGATTATTTATCAATTTTAGCCACATGTTGGTTTGCGAATGCTAATTATTGTGATCAC
AGTTGTGTAATAGGATTTTTATTTACCGCAGTCCATGATTTCTTCTCTACGTTTTCATTC
TACCGCAGCCTATGGACGCCTACGAGTGAAAACTAAGGGGTTGTTTGGTTCCTAGCCTAA
GGTTGCCACGTCTAACCTTAGTCATGCCACAATACCTTAGACACGTGTTTGATTCATTGC
CACATTTGTGGCTTGCCACACTTTTTTAGTTATATGGTCCACATGTCATACACTCATTTT
TTTATCAAATCTTGTCACACTTGTGGTGTTTATTTTGTTAGCCACACTTTACCTAAGGTT
AGTTGTGACAAAGTTAGTCATGAACCAAACATGTCCTTAACACACCCGAGCGTTGAGTCA
TCTTTGAAGAACAATAAAATCCTCCGACGTTGGTCCACCTGAAATTTGCTCCCGGCTGCA
AGCTCCGGGTGCCGACACAAAGGTCCATGTCATTTTTGGGATAACCCCGTCACGTCGTCT
CCCCATCAGCCGGAGCCCAAATTTTCGACAGAATCATTACCTCAGCGAACGAATCCACAG
CGATTTCAGCGAGGGCGAGAGGGAAGGCTGGCCCTTGAGCGCCCGGCACGTCGCCTTTCT
CCTCCTCCTTCCTTCCTTCCTTCTTTTACCACCCTACAGTCCTACACTACCGCCACCACT
GCGCATACACTTCGGCCTCAACCTCCAACCAACGACCCACCACACCTCACTCGCGACTCC
CAAGCCGCAGCGCGCACGAGAGCCCACACGGAACTTCTCGGTCGGATACCCCGTGACTCG
ATCCGCCTCCTCCGGGCGCTCCCCCCTCTCTTCTCCTTCCTCTTTGCCCTCATCCCCGGA
CGCGCGAAGATCTATCTGCCACCCCTCAAGGCCCCGACGACCACCACATTCCGGTGAGAT
TTCCTGTACCTCTTCTTCTTCTTCCATGGCAGCATTTCCCCTGCTTCGGTTTCTGGTTGC
CGTCCCACTTCCTCCCGCCGTCACCGGACTCTGCTTCGGCCATGTGTAGATCTGCGCCGC
CGCTCAATCTTTTACGCAGCGGCCGCGAGATTCCGTGCCTGCGCATTCCGCAGATCAAAA
GCCGAACGAAAGCGGGCGGCGCCCCCTGCCTGCTTTCGCCGGTTCCATGATGGTTTCCTG
CTTTCCCTCAGTTTTCTCTGCAAGAAAGTCTGCGTTTCGACGTGACGGTAAAGGGCGCCA
TTGATGGCGGTAAAGGACGGACGCCATTGATGCGCCTGCTGCAGTATGTTTCCATTCGAC
CGATCGTAGTAATGCGCCTGCCAGGGGCTAAAGGCCTCGTTTCCGGGTGGGTGATGGGGG
GATTGGGAGCGGCTTTTCTTTCCTCTCCCCTTTTGGGATGGGAAAGAAAGAAAGAAAGAA
AAAAGAGGGCACGACCGCTCTTTGCGGATCCCTAACAAATCCTTTTTATTCCAGAGTGGG
GAGCGCTGCATCTACATCCCTAGTGTCGCATGATTACAGTTAGTGGGCGGTTGGACAGGT
TCAGTGGCCTCGCCAGTGCTGTATATAGGACTGGGATAGGAGGGGTGACATCAACTGTCA
AGTGATAACTTTGTTAAGTCCAGTTGTGGCTTGTGACAAGTCTCAACTTCTCTCTCACTC
TGGTGGGAAGGTTGGTGGATCTGAGTGGTGAGTGTGGAGGTTCTTTCTTGATCTTATTCG
GTTATTTGGGACTGATGGTTGACTGTTGATGATCTTTTGCTCTTTGAGTTGATGGCTAAT
GTAGTCATGCAATTATTGCCTGCATGTATATCTATCTTTGGTTTATAAGATTTTTCTTGC
ACCTTTTGCAGATTTGGAATGCACTTCAGTGGTCCATCCAAGCTCAAACCCTTGATTGAC
CAGTAGCAGTGCAAATCTGGGGTTCAGGTTTGAGTTGTCAGAGCAATGACTTCGAAGACA
ATGCCCCAAACCATCCCGGCCATCCCCAACATTGAAGAAAAGAAGCAGTATTCTCAGACT
GATTCCTCTCTGAACCTCACCAGTTCGAGTAAATCCAGTACAGCCTTGCCAAGAAAGTTG
CCTGAATCAGCTATCCTGGGCAGCCCAGACAAAGAAATCCAGTCCAGTGACCAGAAACCA
TCTCATAAGCTGCATGAGTCCATTGATGTTACATCCAGCAAGGAGGTTCCTGCAGATGAT
GAGAAGGATACTTTGGAAAATGGAAATACTGATGGAAACATGAAATCAGACTCAGTGGTA
GATAAGGATCATGGTGCGACGACAAGTGCAAGTGGAAGTGCCAGGTTGACGGGAAGATCC
GAGACTGGAGAAAGAGGTATTAGCAGCCGATGCAGACCGAGCACTGGCAGTGATGTCAGT
GAGGAAAGCGCGTGCAGCAGTTTTAGTAGCACCAGCAAGCCTCACAAGGCAAATGATTCA
CGTTGGGAGGCAATCCAAATGATCAGGACTAGAGATGGTATTCTTGGCCTCAGCCATTTT
AAGCTGTTGAAGAAGCTAGGCTGTGGTGATATCGGCAGTGTGTATCTTTCAGAGTTGACT
GGAACCAAGAGCTATTTTGCAATGAAGGTTATGGACAAGGCATCACTTACAGGCCGTAAG
AAGTTGCTTCGAGCCCAGACTGAGAAGGAAATCTTACAGTGCTTGGATCATCCTTTCCTT
CCGACATTGTACACACACTTTGAGACTGACAAGTTCTCGTGTCTGGTTATGGAGTTTTGC
CCTGGGGGAGACTTGCATACACTTAGACAGAAACAGCGTGGCAAGTATTTTCCAGAACAA
GCTGTTAAGTATGTCTGATCCATCTTTTACACTGAGCATAATCTACTTTACTGTCTTCTT
GACTTTTAGGATTCAACATTTTCTTAGTATTTTAAACAACAGCGTTTATCCGTTTCTGTG
TGTTCCCATGTATCGTGGTAACAAAGTAAAGAATAGTGGAAAGTTATTATCCATTTCAAG
TTAGCTGAATATATGGAAAATTGCCAGTAATGTAGCTAATTGGCGACATATTGTGTAATC
TTGTGCAAATTGTCAACGAGAAAGCAACATTTGCAAATTTAATTTCCTGCTAAAAAATCC
ATCTAGTTTGCTTCAGATTACATCCATGCAGCAGAACTAGACATGCATCAAATTAAATGA
AGCAAATACAACATATAGCGACATAAATATCCCAGTAATACTTATGTAAATATATTTTTA
GTATTTCCTTTACAAGTTATTTCTACTAAATATAAACTACTGCACACTGATCCGATATTG
CATTTCTTCTTAATCGCAGATTCTACGTAGCAGAAATCCTCCTTGCTATGGAGTACTTGC
ACATGCTCGGTATCATATATCGTGATCTGAAGCCTGAAAACATTCTTGTCCGTGATGACG
GGCACATCATGCTATCCGACTTTGACCTCTCCCTTCGCTGTACAGTCAGCCCGACTCTAA
TCAGGTCATCTAATCCCGAAACAGAAGCACTTCGGAAGAGCAGCCAGGCCTACTGTGCTC
AACCAGTTTGTGCAGAGCCATCCTGCATGATACAGCCATCGTGCACGGCCCCGACAACAT
GCTTTGGTCCTCGGTTCTTCTCGAAGTCGAAGAAAGATCGAAAACCAAAGCCTGAAGTTG
TCAACCAGGTCCGCCCATGGCCCGAGCTTATGGCAGAACCTAGTGATGCTCGATCGATGT
CATTTGTTGGCACACATGAGTACTTGGCCCCTGAGATTATCAAAGGTGAGGGCCACGGCA
GTGCTGTTGACTGGTGGACCTTTGGTATATTCTTATACGAGCTTCTGTTCGGCAAAACAC
CTTTCAAAGGTTCAGGTAACCGAGCGACACTGTTCAATGTCATCGGTCAGCCGTTGCGTT
TCCCAGAATACCCAGTTGTGAGCTTCTCAGCAAGAGATTTAATAAGGGGCCTACTTGTTA
AGGAGCCCCAACAACGGTTGGGTTGTAAGCGTGGTGCCACTGAGATAAAACAGCATCCAT
TTTTTGAGGGTGTGAATTGGGCGTTGATACGCTGTGCGAGCCCTCCAGAGGTTCCGAAGC
CTGTTGATATTGAGAGGCAGACTACAAAGCTTCCTGTGTCAACATCTGAGGCTAGTGCAG
CACCTACTGGTGCATCCCAGAAAGGCTCGGACAACTATTTAGAGTTTGATTTCTTTTAGT
GAACAGAATGTTCATTTTTTCCCATTTGTTTTGCATAATTAGAAGGTTTTAGGCTTTTCG
CATGTATGTGTCTGACAGATGAGTCGTATGTAGATTTTTGTGTCTGTCAAGCTATTTTCT
GTTTTGTAGTGAACAAATTGGATGTTTCAGATTTTTATTCCTCCACAAGTTTTGAAGTTG
CTAATCCTTGTGAGTTGAAATCTTCATGCGGTGTGCAGAATTAAGCTCAGTTTTGTACAG
CTTATGCTGTCGTAAAAAAAGGTTATTACTGCCAAAACCACTGTTGTTCACACTGATGGC
TGCATCATTGTGTGCACGATCTGAATCACATTCAGGCGACAAGTCTTGCTGAAATAGTGT
CTGATTGAAGTAGGGTAATCATGCGTATGTCAGCTTGCACTACGGCACTGATGACGTTAT
TTAACTTTTTATAAGTTGCTGAGCTCACTGATTGTCCAAAATATAGCACAGATGCTCCCT
ATCAACAATTATGCTACTAATTGATTGGCTGCAACTTCTACCTAACCATGTTCCTCTGTC
CAGTCATGCATGTTGTACGAAATGTTTATGAAGTCTTAGGACGACGCGTGCATCTGTATC
ATCTTTATGTTTTCAATTGCAATTGCCTTTTTTCATGTAGCTCCATAACCACTAGAAATA
TTTACAAGGCTTCATTATAAAAGAAATAAAATAAAACAAGAAAAAAAACCACAGAGATAC
GCTGAAAAGCTCCATGTAAGGTAAATTATCTCATTTGTACACCATAGATCGAGAAGTTTA
AAATTCAAAATATGGCAAAACTTTTAATCACAAACTTTTTGCTACCTGAAGATGGGCGCA
TACAGCATTCCAGCTGTGAAAGCGACTGGAAGAGCAATCAGGATGACAGGCACCTCAGAA
ACTTGGGAATCTTCCTTCTTTCTTTGGTTTTGTCATCATTTTTGCCATGAACTGCCTCCA
TGCTATCGCGATTTGGCGTAGATGATGGCGGTGTCGGGGTGCGAGATCTGCTGTTGTTAT
TTACAGGGGAAGGTGAGAATGGTGGCGTTGGATCAGTAGTCGTCGCCGCCGTAACTTCTT
TGCCATCACAGACAATCTTGACTTCGCAGTAGAGAGGTGCATTCTTCTGTATCTGTCCTG
CTATTGTGTTTCCTTTCTTCAACTTCCTGTACCCACTCAAAATTAAGTACATATATATTT
GGCAAATTGAAGCAAACGTTTGAAATCCTGCTAATTTTCATGCTTCATGGTATATAGACC
TCACCGCAAGTTGGACTTCGCAACCCCCAGTACTAGCTGCTTTATGTTCAGAACAGGGAT
AAGTTCAGTGACCGCATCGGCAATTTGATCACTCTCGATGAGGTACACATCGACATTAAC
CTGAACATATTTGCAACAATTGAAATGTACTACTATGAAATTTGGCATGTAAAGTGCAAT
AAGATTTTTATTTATTCATCAATTTATTGCAAAGAACTGATGCAGCCAGTTTACCTGAAA
GTTGCGACAGTGGTCCAGAAATTTTTGCAGCATCTCTCGCCTCTTGGATCTCTCTTGGTT
CATGTAAGTTTCTACCTGCTCTGGCGTTGCTTGTCTCTTAGGCATCATTCCTACTATTTC
AGAAAATTGATGCCACATGTGTCAGATTCCTCACAACATAAAGACGCCTTTTAACGAAAT
CTTTATTGCTGTTCAGTAGTCAAATGATCAAATTCAGAAAATTCTGATATTTAGGACATA
ACTGTTAAAACCTACGTAGAAAAGTACGAACGGTAAAAATATTAAAGTATAATATATTTG
TTTCTTGGACCTCATGATAAAGACCAAAAAAAGTGAAATAGTTATAAGCAAATTTGCCTA
TATATAAGTGCTGAATAAACTTTATAATAAAGGCTTTATTGGGTTTTCGTCTATAGGAAA
AAGACCTATCAGGAATGGAATCTTAATGTCTTGGTTTGTTCACACTTCAGTGGCAGGCTA
ACATCAGAGACTGGTATGCGTCCTACTCTCCTCGGCATCCCAGGAACCTAACGCCTAAAG
TTTGGCATCCCATATACTCCACATATCCAGTAGTCGTGAGCTAAAAAGTTTGATCTGATA
GCTGAGAATATTTATTTTTTTTGTAAAATGATTGTGAATATATACTTGGAAAACGATACC
TAGCACAAACACTATGCCTTTTCTCTACAAGGTCTACCAAAAGCATTCATTCTCTCCCTT
TTGTGGCTATCATCAGACATGTACTTTGCCAAAGGAAAAACATTGGAGATGTAAGATGGT
AACTCTAATCTCCTTTTTAAGCAAGAACCTGATAAGTAACAGCATCAAATTAACCATGTA
GTTGTCCTTGGGAGAACATTATGTCCATCTAGTCAGTATAATTAACACTGACAAGTGTGA
GTCCGACAACAAATCAATCCATGAAAAAGCACAGTGGGCCATATAATCAGTAAATGATTA
ACGAAAAGTGCGAGTCAGTGGATGAAAACCTAGGTCAGCATCATCAACAACACTTTAGAA
CTTCCTCGATTGCAGCTTCGCGACGGGCCGACTTTTCCAGTCGTTCTTCTTCACGGAAGC
TCCAAAACCCCTAGCAGCCAGCCAGGTGTGGTGGACTGGCGGTGCCGCCTTTGAAAAGTT
CCAATCATACAAGCCAAAAAATCCTCTTGAGGCCAGTCCAAGAACATGACCTTGTTTTCA
ACCACCCTTTTCTGGGACCAATTGGTGGTCGATCCAAGACCAGACTTGTTTCTACGTTCC
TACCAACTGTTTCGGAATGTTAGCCGTCGATCTTAACGTAACACTTTGACTGCCAGTAAC
TTTTTACCTTTTCATTCATGTTGCAAAATCGTTACTGTTTTGATTGCCGCATGCAGGCAG
CTGGTAAATGCTTGGATGGCTTCATCGATCTCACAATGCTAAGGTGAACAGACAGGAGAA
AAGGTTTGATTCAGGAGGTAGTAAAGTGGGAGAAGAGGGTTGCTTGATTACATGGGGTGG
GGATGGTGGCGACGACGGGGAAGACGTGCACAAGGTAGACGAAGCTCCGCGGCCTCGCGA
GCCGCCGCAGCGCCCACGACAGCGCCGCCATGCTGGACCCGCCCTTGCCCACCGCCACGT
ACACGTCGTCGGCGTCGGAGGTGGCCGCTGCCCGGGGAGAAAGGCGAGGAGGCGGCCCGG
CCGTCCGGTCTTCCGGCTCCAGCTCCTCTATCTCCCACGTGCTGTCGCCGTGATTGCTCG
GGTGCAGGCCGGTGTCGTCGTCCTCGACGATGTCGACCACGCCGCGATGGTCGTCCCGGA
CGGCCTCGGCCATGCCTCGATCTTCCTGGCCGGCCTCCCTGATGGGACAGTAGTAGTAGC
TAGCTCGTGGTGGGCGTGAGATGGAGCAATGGAGAGAAGGGAGGAGGAGGGCCTTGTCTT
GTGTACTCTGTTTCGTCTCAAATGCGGCCAGTTGGAAGGGGCAAGGGGTCGTGTGTATAT
GTTCTAGTTTGACTTTTTCCTAAAGATTTGTATATCTATCTATATCTATACTCTATACCT
AATAATAAAGCGGGTAGTAAAAAAACACACCACGGCATTTTTATAAAAAAGCCAATGTAA
TTTTTGTTATTCAACCCGCGCTTAATCATTTATCTACAACGTAAAAGGAAAAAACGGTTC
GCTGCAAAAATTATACCCATACGCATCGCCTCCTCTCGTCGACCCTGGGCCACCCTGGCC
T
