Contig Data
morexGenes
Links



Map Locations of contig_1571056 (5214 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1571056

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15578 2 735 bp AK248511.1 Available Available None





CDS Structure of MLOC_15578






Contig Sequence (5214 bp)

>contig_1571056 5214 assembly3_WGSMorex_rbca.fasta
GTCCGGGCCCAGAGGCAGGCCGGGACTAANNNNNNNNNNNNAAAGGCCCGTTTTCTACTA
GTGGTGGTTTCCTTTTTGATTTCTTTATGTTTTTCCCTCATGTTCTTCATGTTCATCATG
TTCTTCTCAAATCCACCTCCAATTCATGCAGATCGGGCCACCTCGGGTTTACCCCGTATC
ATATTGGTATCAACAACCACGTTACTACGAATTTGGAGCGCTACCCCCGCCCCCACTTTT
ATCCTTTAGTTTGATTTTTTTCTCCCCAATTTCAAAAGTTTCCCAAAAAAGAGCCATACC
AAATTTCTTGTGATTTTTTATTCTTGTAAGTTTTTTTATTTTCATCAATGGGTCTAGTGT
TTGGCAAGTGGCTCTACCTCCCTTGACGTTCCCACACCACACCCTAGCACATCTAGTCTT
CACGACAACACCCTTAATAGGGAGAACAACGCCGAGCATTGCCGCTGCCGAGTCTGAAGC
GGGCATGGATTTTCACCCAGAGCCTTAGCACAGAGAGAGAAGCACGATGACTTCTTCTAT
AAGATAGAGGCGCCCATTGGGCGCCGTCATTGTCTACGAAGAAGCACGTAGTCTTGGCTC
GACGGCTCACCCGTGCCATCTCGATGATGCTATGCCATGTGTGGCGAGCTCCAAGGGCAA
TGCCTTTGCCAATGGCATGATACACGTCCGAGCCACCAGTCGCTACCCCTTGCCGCCCAC
ACGACCAGGGTAAGACACCACCACCTCCATAAGACTCGCTGGAGAGCCAACCATGGGGAC
CACCATCCCTGCCGCAAGACATCGTCACCCGACCACTTCACGACACGCCAACCACCACAG
GAGGAGTAGAAGGCCTGCTTCCACTCCTAGCCCGACATCAGTCTCTGGATCTTGGCCCAC
AGCTCCATAGTAGGAGTCGTCAACACGTGCATCCCCAGCTAGTCCTGGTGAACCATGAGG
ACACGATCTTGAGACTACCGATAGCCACCATGTAGGCATTGAAGTGCCAGCATGACGCCT
AGTCCGTGGCCATCGGCGACGATCTGTAGGACCATTGGAGTGGCAGCTTTGACAGAACCA
CCACCATTGCACATCGCACCCGCGAATACACCTCTCGTGGGCACATCCCAGGCTGAGCCC
AGCGTCACCTACCCCAGGAACCAGCCTTGATATGCCTAGGACCCAGATCTGACCCGACAG
AGCACAAACCATAGGAAGAAGATGTCATTGCTCTGCACGCCATCTGCACCGACTAAGGAG
AAGGGACCCGTCATTCCACCACCCTGCGCTGCCAGGCGTACCACAGCCACCGCGTTGCCG
ACACCAGAACCAGCCCGCACCCCATCCCAACCCGCCTCGTCCGAGGAGCAGACCGAGGAG
AGGAGGGAACCACCACCGCCGCTAGCTGCTGCCGTCATCCCCTCACGAGAAGAGTGCCAC
CACGTCATGGCCTCCATCGTCGAGGCCCATCACAGCAGCCACCAGTGCCTATTGCCGCGG
CCTGCTCCGCCTGCTGGCCAGATCCGACCGCCGCAGTGCCGGCGAGCACCACCAGGCACG
CGGTCCCTTAAAGCCGCAGCCGCACCCCGCGTGACTTCCACACCTAAGAGCCGCCGCGCC
ACGGCACCCTGCGCAACCACCGCGCCCAGGCCCAAGGGAACCGGCCTGCGCCTCCCCATC
ACGCGTGAGGATGAGGATGCAGGAGGGGAGGATCGCGGCGAGGATCTGGAATTCCTCCCC
GGCCGCATCACGGGTGGCGGCACGGGAGAGGGTAGGGTTCGGGGGTATCATGCTCGGTAG
TTGATTACCGCCAAACATTTGAACACAATACTGAAAATACTCTGATGCTCTTTATTACGA
TTTAACACACATCACACATGGGCATAGATGCATACAATCGATTGGTCCATTGATCGATGC
ACCATGCTTATTCATGATCGAGCTAGTCGTTATAACTTATGACGAGACCACTCCATATCC
GGGCTGCAGTTCGGGGCAGGACGGGCTGCCGTGGATGGTCCATAGGTTGCACTCCTGCGG
GGTGACGAGGTTGGCGGCGTAGCTCGTTTGCCTCTCCCTAGGGCAGTTGGGCGTGTCCTT
GAAGTAGGCACCCTCGAACGCACCCTGCCAAGTTACTACCCCTTGCATGATGATACGCAG
CGCTTCGCACCTGCAGTACGCCGGGATGGCCGACAACTCGTCGCAACACCGCCTCTTCAT
GTCCGAGGTGAGGAGTCTGGGGCCTTGGTGGCAGATTTGACTGACCACGTAGGTGCGGCA
GGCTCTGAGAGGGTTGTGTGGCAACGCATCCCCTGGAGCACACGAATCCCCGAAACTGGT
GGCAGTGGCGACGAGAATGGCGAGCATGACGGCGGCCGAGAGGATGAGCTGGTACTTGAA
CGCCATTGTTTTCGTTTAGAAGGGATGTTGTTGGAGCTAGCCAGGCGTATCACATGTATA
TATATATAGTGAAATGTGAAGTGACAAGCAGCTGGCATCGTAAGTACCGAAGTGCTTTCT
GACTTTCTGTTAGTTGTTGGAGTGCCGCGACATGGAAATTTTGGTTAAAGGGTAGCTTTG
ATAACCTTTTTTGCTAACAGAATTTGGAGCTTTGTGCTAACAAAACTCGGAGGGGAATGC
AAAAGCTGGGGTTTGAGTGGAAGAATAACCACATTTGTTGGGTTCCTTCCTTTCTTGGTG
TGCTTGGCATGAGTTGTCTTATCATACTACGTGGCAAAGAGCTACATCCCTGGTTCATCT
GCATTTTTTTTTTCTTTCGATAAAGGACATTTAAAAATGAATTACTGAGTTGATATAATC
ACACCGCAAAAAGACCCGGCCTCTGCATAACAAGATGCATGCAGCCAACACAGTCCACAA
ATTCGTTAAAAGTAAAAAACAAGATGCAACTAAGAAAAGCAAGTATAGTAGCCTAGGATG
TTCCCGATCCTATCCGAAGGTCACACCGTCATCGATGAGGGTAGAAAACCTCCGTGGTCG
TACGCTCCAGCCGTGTAGACGCCATCATAAAAACGTCCCTGTCTTCCGGCTTCTGCAGGA
TAGATCAAATACGGAGTCATCGCGAACATACATGAATAACCTGCACAGGAGATGGAACAC
ATTTTTTGTTAAAAAATATATCATTCCTGGTAAGCCATATTGCCCAACATAAAGCAGCCG
CTTCCACAAGAATGTGAACAGGAATATGTTTGTGAATACCCGTCAACCAGTTGCCGAATA
TGTTCCGTGCACTACGTGGTGGGTATAGGTTTGAATCAATTTGGACAATGGCGCACACAG
ATCTAGCAAACTTACACTAAAAAAATAAGTGTTTGATAGACTCGTTGTGATGACCGAAGA
CGCATTTTTTGCATCCTTGCCATTTGCGTCGTGCCAAATTATCCCTGGTTAAGATGACAC
CTTTATTAAAAAACCAAAGGAATATCTTCACTTCTAGAGGAATCCTAAGCTTCCACAATT
TTCTGTTATCAACCGGCACCTCGTTATGAGCCAGCACATCATACATGAACTTGACCGAAA
ACTTGCCATTTTGATGCAATTTTCATTGAAAAAAATCTGATTCATGTGACAGCTGAACCA
AACGAGTGAATACTTCATCCCATGCTGCCAGTCGAGGTCCAAGAAGAACCCTACGAAAAG
AGATAACGAGATTATCCCTAGTTCATCTGCATGTCATTCTCTTCCATGTTTATTCGTAGT
GTAATCTAGCACTTCAAGTAAACTCTCATTTGGTTTATGAGTCGAGATCATGTCTGCAGC
CGATCTGAGAGGATCCAATCTCATGACTTGGCGGGCGAAAAAGTGTACCCAACCGAGCAG
TCGAGCATGAGGGAGTTATGTTAGTCAGTAGGTTAGCATCTTTATATATATATTCACACA
GCAAAAAAAATCAAATTCAAAGTTCATTTAAATTCATTCGGGCGGAAAAACCTTGAATTT
ACAAGATTTTCCAGAAACCGGTTATTTCAGATCCCTCGGACAAAAAAGAAACAGAATTAC
TCTAAATACGATAATTTGGCATACGATGTTGTATGATATGTCGTATCGTGTCTTATGCAG
AGTACTTCTGAAAAAAAAACTAGTAGCATCCATGCATTATCTTTTGGGAAAATATTATCT
AGTACCGACCAATCGCGTGGTCGTTCGATCGTGTGTTCCTGCGTCTATCGAAGCCGCTTT
CGTTTTCCTGCAACTCACGTATTGTTTCAGGATAGACATTTTTTATACTGAATATAAGTA
TAGGTGTTTCGGAGCCCGTCTGGTTGTGAGGGGCTCTACGAAAAGAAATCTACTAGCATC
CATGTGACAGTTGAACGACCTCCAAACGAGTGAGTACTTCATCCCATGCTGCCAGTCGAG
GTCCAAGAAGAACCCTACGAAAAGAGATAACAGAATTATCCCTGGTTCATTAGCATGTCA
TTCTCTTCCATGTTTATTCGCAGTGTAATCTAGCACTTCAAGTAAACTCTCATTTGGTTT
ATGAGTCGAGATCATGTCTGCAGCCGATCGAGAGGATCCAATCTCATGACCTAGCGGGCG
AAAGAGTGTACCCAACTGATCAGTCGAGCATGAGGGAGTTACGTTAGTCAGTAGGTTAAC
GTCTTCATATATTTTTTCACACAGCAAAAAAAAAATCAAATTCAAAGTTCATTTAAATTC
ATTCGGGCGGAAAAAACCTAAATTTCCAAGATTTTCCAGAAACCGGTTATTTCAGATGCA
CCGGGACAAAAAAGAAACGGAATTACTCTATATACGATAATTTGGCATACGATTTTGGTA
TGATATGTCGTATCGTATCGTATGCAGAGTACTTCTGAAAATAAATCTACTAGCATCCAT
GCATTATCTTTTGGGAAAATATTATCTAGTACCGACTGATCGCGCGGCCGTCCTTCGGCT
CCGTGGTCGTTCGATTGTGTGTTCCTGCGTCTATCGAAGTCGCTTTTGTTTTCCTGCAAC
TCACGTATTGTTTTAGGACAGACATTTTTTATACTAGATATAAGTATAGGTGTTTCAGGG
CCCTCTGGTTGTGAGGTGCTCTACAAAAAGAAATCTACTAGCATCCATGTTTCTTTTCTC
GTTCTGTAATACAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNATGTTGTATTACCGAGTGGGCCGAGATACCTCTACGTCACACGGAGTGGCAA