Contig Data
morexGenes
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Map Locations of contig_1571053 (2757 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1571053

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15577 2 683 bp MLOC_15577.2 Available Available LOC_Os03g47260.1, FRAME:+1, EVALUE:4e-26, 13103.m05087 protein expressed protein





CDS Structure of MLOC_15577






Contig Sequence (2757 bp)

>contig_1571053 2757 assembly3_WGSMorex_rbca.fasta
GGCGACGGCCGGCGGCGCCGTGGACGTGCGGGCCGTCGGGGAGTTCCAGAGGCCCGTGGC
GCTCGGGGAGATCAAGAAGGCGGCCGCGGCCGGGGAGGTGGAGGGGATGAAGGACTTCGC
GCTGATCCGCCAGGCCCGGCTGTCGGTGATGCCCGTGCCGGTGGCGGTCTGGGACTGGAT
TTGTGAGACGGGTGGTGGCTTTGTGGAAGACGGTGAGGTGGGAGACGACGAAGCTTCTTC
TGGTTGATGATGCTCTGAACTCTGAAGGTAAAAACAAGCTACCGCTGCAAACGCGAAAAT
GTTTCCCGGATCAATCCGAGGCTGATTTGTCTCTGCACTTCAGATTCATCCCATCAAATT
GTCCTCTAATCTTGTGAAATCGTTCTAGATGCAGGTGACATATGCAGTTGGAAGCATCAT
TTTGCGGTGTCTTTTGCCCTGCAACTGCGTGAGATGGCATTTCAGAGGAGCATTTCAGTG
ACATTTTGTGTATCCTCATCTAGCGTTTGCCGTCTCTGCACCGTGGTGTGACCAAGCGTG
TATCCTCTACCTAGTCGATGTTGCCATGTCGCAAGAACAGTTGTTATCGTAGGGGGGCTT
TGAGATCTATCAAGAAGTCGAATGCTGTTCTTTGTGGCTGTATGGATATGCTGCTCACTG
AATTTTCGAGCAGGTGGTTTCATTCTTTTTATGTCATGGCACTCATTTATGGTTTCATCC
TACGATTCATCATCTGTAGGATGCAGGCAGAATCCTGTGAGTTAGAAGTTAGGACACAAC
ACTAGTGCCCACCGTTCATAGTGTATTTGCACATCGGATCATCCCCATCAGAAAGTCTCT
TAAACAACACAAATCGTTGAAGCGCATTGATGTGTCGCGATATCGTGGCATGACAACTTC
ACAAGTCTTTTGATGCCACTCGTTCAAGTATGATGGTAGCCTATTTGGTATGGCTTTGGT
AATGACCTGCCAAACCTGCTGGGCCGTTGTTCCATCGCTAATGCATGCAATCGACTTAAC
CAAGCATAAGAGCGAGTCCTCTTGCTGCTTCGATTGCCAGAAGCTTTTCCGTGTCCTTGA
TATTTGGTTCTCTCAAGTGTTGATCGTGCAATTTTGGACACGATTGTTTTTTTTGCATCT
GTGTTTTGGGTCCTCTTTGCAAGTTTCAGGGGCTTATCTGTAATTTTTGGTTTTCTTAGG
GTCATGCTTGTGAGTTGTTTGTACTACTCCACCGGTTTGACTTGATGAAGTATTTAGGTC
CTTCGGAACCCTATCCTTGTTCTAAAAGAAAAGTGCTCATCGCCAAACACATTCACCACG
AAATATGCAAATCTCACCATTGCGTCAATACATGTGGTCTCTTCCATCTGGATGATGTCA
TCAGCGGAATCTCCACCTGTACCATATGCAAGCATCGTGAGATCAACATTGCATTTATGG
AGAGGAGAAAACGATAGTTCTCAGGTGCAATCCTTCCTCATCGTGAAGGACCATATTCTT
TCACACCATTCACTATGCGCAAGAACAAATGCATGTTCATACGAAAGTGACACCGAAAAA
ACTCCTCATGATATACCATCTTGGCCCCAAAATAGTCGGCGTAGAGATACATATGGCCCT
ATATCCCATCTCGGGTAACACTTCTCCTGCCCGACATCGAACACCCGAAGTTGTGAACAT
GCTCCTCTCATCATCATCGCTGCCCGATGACGATGAATCGAAGAATTTCTTGTAAATGAT
CTTATCAACCTTTGAGTAAACAACCTCATCATTAGACAAATCCACGATGTCTTTGCATTT
GTTAAAAAAAACTCGAGACATTTGGTCAAACATATGGTGGGTAAGGTTTATGGCGTGTGG
AAATGTGTCAAGGTGGGGTCACGGGTGGCAACGATGTTAAGTGGTAGAGGTACGGTCGGA
GGCAGGACGAGGAAGTCGCGACATAGGCGCAAACAAAACAAGAGAAAAAGTGTAGGCGGT
GGCGAGGAGTTGGAGGTAGATTTAGATTGGTCTGGCTTGTTACGTTTGACATGACTGGCG
CATCAGAACAGCCCCAAATCGGATCCACATATGGATTCGGTTTGGAGGTGTGGAATAATC
CGACAAGTGAGTTGAGGCGATTGGAGAGGTTTTGTAGGTATCGACATATCCTTCGCGGGT
CCGGTTGGAGATGCTACGATATGGGGTGCATGCTGGCGGGAAAATATCACAAGCTCCAAT
CTTTTAGGCGCTCCCAATGCTTCAACTTAAAAAAAAAAACTTTTAGAAAAAACTAAAAAA
TGTGAATGTTCATAAGAAACGTGATTAGAACTGTTAAAATCTGTAGTCCCAAAATATAAA
TGAACATTGAGAAACAAGAATGTGAAATCCAGCATGAACAATGGCATAAAAGACAAAAAC
AACATTTGGCACTATTGGCATCTGAATTTGTCTTCTTTTTTACTCCATGTATATTTTGAG
TTCGGACCTGGAATTTTTAACGGTTGTAGTCACATTCGTTTGAACATTCATAGTTCTTTT
TCAAATTTTTTGAAACATTGAAAATTGATGTTTTGAAATTGAAGCATAGGGAGCCCCTGG
TATTTTCCCCCATGCCTGGTCAAACGGGCCGGGCTAAACAGGCCGACCCGTCAGCCCGCC
AAGACGGCACAACATGGGCCTGGCCCGACACGATTTAAACGGGCCGTGCCAGGCACGCAA
CACGCCTCGGGCCGTGCCTGGGTCTGGAGGCTGGGCACGCGAGCCGGCACGACACGG