Map Locations of contig_1571041 (3681 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1571041

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15570 1 1438 bp AK375963 Available Available None
MLOC_15571 1 668 bp AK358098 Available Available None





CDS Structure of MLOC_15570






CDS Structure of MLOC_15571






Contig Sequence (3681 bp)

>contig_1571041 3681 assembly3_WGSMorex_rbca.fasta
CACCACCCTACACCATCATCCCCACTCACTCCACCCCCCACCCCCCCCCCCAGATCCCCC
CGCCCCGCCGACCCCCCCCCCTCCTCCCCCGCCGCCGCCGCCGCGGCCCAGGAGGCGCTC
CGCCGCGCCGCCGACGCCTACGCCGCGCTCAAGGAGGAGCGGGATGCCCCGCCCCCGCCG
CCCACCTTCTGGACGGCCTGCGCCGGCTGCCGCCTTCTCCACGAGTTCGACCGCCAGTAC
GTCGGCTTCCGCCTCACCTGCCCCTCCTGCCGCCGGACGTTCCTCGGCTCCGAGGTGCCC
CCTCCTCCGCCGCCCAAGAAGCACAAGGCGGAGAAGACGCTCGCCGAGATGCAGCTCCAG
CTCGCCAAGAGAAGAGGGAAGGATCACAAGGTACCCCAGAGCTCATCCAGTGATGAATAT
GACGAGCCGGCGGAATCGGAGGTGCAGGAGGAGGACCCGGTTAGCGATCACTCGGGGCAG
ATGACTGTGGAAGACTCAGACTTCTACAATTTTGATGCCGACCGCGTCGAAAAGTGCTTC
AAGAGAGGCCAGGTATGGGCATTGTATGGGGACGACGATGGCATGCCGCGGCACTATGCG
CTGGTGGAGATGGCATCGCCGGGCAGGCAGTTCCGCGCACAGATACGGTGGCTGGAGCAC
CAGCCTGACGGGAAGGAGGGGAAGCCATGTGGGTCGTTCAAGGTCGGGAGAGAAGCCATG
GTGAGCTCGGTGAATGTCTTCTCACATCTTGTTGCCTGTGAAAGGGTGGCGAGGGAGAAG
TACCGTGTTTACCCCAAAAAGGGGTCAGTCTGGGCGCTCCATGCCGGAGAGTACGCCGAC
ACCGGGAGGCCCAAGTATGACTTTGTGGTGTTCCTCAGCGGGTACAGTAACGTGCACGGC
ATTAGCTTTGGCTACCTGGACAAGGTTGAGGGTTTCAGGAGCATCTTCACGCGCCGCGAG
ATAGGTGTCCATGCCATTCAGTACCTCCGGGAGGGCGATGTTGGGATGCTTTCGCATCAG
ACACCAGCAAAGAAAGTCTCCAAGGGTGAGTCCTCGGCACTGCCTCCTGGGGATTGCTGG
GAGCTTGACCCTGCATCTTTGCCTGCTGAATTACTGCACGCCTAAAGGCACAAGTGGCTT
CGGAGTGATAATGCTGACAGGGCCGTTAGGACTGTTTAGGTTCCAAGTTGTGTATTAGTA
GGGGAAGATGATCATTTGGATGGTGTCAGATGATGTGATGATGCTTCTATTTGAAAACTC
TAGATGGATATTGGTCTTCTTCAAGTGGAGACTTTGAAATCATGGATGATTGTGGCTGTT
TCAGAGTTCAGTGCTCAGTGTTGAGTTCTACTATTGCAGTGTGTGAAATGGATTATCTTC
ATATGTATTGATTGATTCCGTGAATTTTAGGGAATTATTTGATCTAACATGTTTAATCAG
AACAGCATGTGTCCATTATTGTTTGAAGTGCCTTCCAAACAAAAAATATGCCTGAAGACA
CAGGAAGTAACAAACTGTTGCAAGTTGTGATGAGAAATGCTAATGTGTAACTGGTCTTAG
TAACAATGGAATCTTTGTAGGTGTTCTATTGAGTGTTGAGATCTGTTATGGCAAAATTGT
TTGATCTTGACTGATCTTTTATGTATTGTTTGATCTTGAACACTTGACTACTCTATTAGT
ATGAATGAATTAATTTTGGCAAAAATGTTTTGAACTAATTTATTCAATTGGGACAGCACG
TGTTACTATGTTGTAAGTGGTTCTGAATTGTCTTCCAAACAAACAATGAGCCTTAAGACA
CAAGTGGTGATTGAAATATGAGATGAGGGAATGCTAATGTATAACTGGTCCTGCAACTTC
AGATTGGATACATATTTTTTTAGATCAAACTTCAAATTAGTTTTTCTTTTATCAGATTGG
ATGGTAAGGTACAAGATATGCTTTTTGGATTGAGATTTTCTTTACGGCATCAGCCTGAAG
ATAGTCTCAATGTTCCACAAAACACAAGCTGTATTTAATATTTCGTTGTTGGCGACAAGC
CTTATGCCATATTCTGAATCAATGGTTTACTGATCCATGTGCGTTGCATCCATCAGAACT
TCATTTTAAGCAGGTCACTTCATTTATTTTTCTGCACAGCATCAAGAGTGAACAACGATA
ATATTTAAGCGATCACTTTTCCCAGTCTTCACTCCCTCAAATAAGTTCTCATGTCGCACA
AAGTTAATGCTAAATCCACTGAAATCTTATAGTTCATAGAGGAACTCTCAGATTACATAG
GTGTGTACCACATTAATATCTAACACGATGACAGTCTCAGACATTAGGACACTACAAAAT
CTTGACAACTTGGAGCACAGTTGCTCATCCAAGGAAGTTCATGATCACCAGGTGGAGCAC
CAGATTACACAGGACGAAATCAGCAAAGGCCCTCTCCGGGGGGAGATCCTGAAGATGATG
TTTCCACAAACAATGTTATGCCGGAATCCAAAGAATAATTTGCCATACAAATAACAGTGG
AAGTCGAGTTACCTTGAATTCCTTGTTGTCCTTGTTGACTTGAATACGGAGGCAAACTGC
AAAGACATCGGCAGTTGTATTATATATCCTGGAGGCAAGGAAGAGTGAACGAAATCGGGA
GGGGTAAAAGAAAGAAATTCCTACCACCAAGCACTGCAGTTCCAATGGACGACAGGACAC
CAGACAGGAAAGAGTTGAAGGGGAATGACCCAACTATTCCCATGTAAACAACCTGTTTTG
TCACATACAAGAACATTTCAGTAGTCTGCAAATGGCTCTGCGTTACCAAGCCAAGGTTTC
TGTTGCAACTAGGGGAAACAGAGGACTTGTAACTTTTGAGTTGAACACAAGGCTAGTGAA
TAAAAACATGTGCTCAGATGGAAATGGTGGCTAAAGAATCTGGCTAACGGTCAGTCAGTA
CAACTAAGTTCCCAAACCAATAATATGGCCACAGAACACATATCAGACATTGTTATGCAC
TACACGGTGCATCAGATTCTCGCAAGCCATAGGCTACCGCTACAAAAAGATGAGAACTGT
GGCAAAATAAGCATGCAAGACATATATCATCCATGGAATCAGCGCATGGCTGTAGCAGAT
CACCAGGTATGTGTGTCATGCTGCATAATTAATTTCCCAAACTCAGTATTCTACACTTCT
GCATCTCAAATCATCAGTATTCTACACTCCTGCATCCCAAATCAGGGCTCATGTATCCTG
GGGGCAAGGTGTCGAAATTTACCTGAACCAGGGCAGTGGCCACGGCGAAAACCACGTACA
GGTCAATGATCTGCAGAACAGGATAAGCGCATCAGTGACCCGGCAGTCGCCGGTGGCAGA
GGAAAAAAAATACTGCTCGGGGAAAAAAATGAAATTTACCTTGAGATTCGTGGGCGTGGC
GGCGTAGGCCTTGTTGAGGGACTGGATCAGGAGCTTGGCATCCCCCGCGGCCTTCGGCAT
CCTTCCTTCACCGCGAGCTCGCTCCCACCCTCACCCCGCTCCGTGCTGGTAAATCAGAAT
TCGGGGAATCAGATCGCGGCGGAGCACGGACGGCACGGCTCCCAGATCCGGACCCGGCCG
GCGCGACCACGGCCCCGGCGGGGGGGGGGGCGGGGCAGCGGCGCTACACCCTGATCTGCA
TGATAATGATCTCAATTACTG