Contig Data
morexGenes
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Map Locations of contig_1571016 (1478 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1571016

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15558 2 1139 bp MLOC_15558.1 Available Available LOC_Os04g55070.1, FRAME:+3, EVALUE:1e-153, 13104.m05704 protein gibberellin 20 oxidase 2, putative





CDS Structure of MLOC_15558






Contig Sequence (1478 bp)

>contig_1571016 1478 assembly3_WGSMorex_rbca.fasta
CGTATCGCATACATTATCCGAAGTTGTGCGAAGGGGCGGGGCGCTCCCCGTGGTGGACCT
GGCGCCGTTCTTCGCCGCGGGAGACGCCGACGACGCGGGCGCGCGCGCCCGTGCCACAGA
CGCCGTGCGCGAGGCCTGCCAGGCCACCGGGTTCTTCCGCGCGGTGAACCACGGCGTGCC
GCCGGAGCTCATGGCGCGCGCTCTCGATCTGTCGGCGGCGTTCTTCGCGCTCCCGGACGA
GGAGAAGGCCAAGGTGCGGCCCGCCGAGGGCGCCTCCCCCGCGCCGCTCCCTGTGGGTTA
CGCGCGGCAGCCCGCGCACTCCGCCGACAAGAACGAGTACCTGCTCCTCTTCAACCCCAA
GCTCGGGCTCAACCACTACCCCGCCCACCCTGCCGGATTCAGGTTACTTCTTTCTTACTC
TGCTTCATTCGTGGATTGTGATTGTAGTTCGTAGCAACCTCTGCTTCGATTCTGATTTCT
GAATTGTGATTCTGAATCCTTCTTATATGAATTGAAAGAAAAAAGAATCTATCATCTTCA
GGGATGCGCTGGAGGAGTGCTACGGCAAGCTCACCGAGCTGGGGCTGCTCATCCAGGACA
TCCTGAGCGAGTGCATGGGCCTGCCGCGAGGCTTCCTCGCCGATTACAACGCCGACCGCG
GCTTCGACTTCCTCACGGCGCTGCGCTACTTCCCGGCGACATCGCCCGACGAGAACAACG
GCATCAGCGCGCACGAGGACGGCAACTGCGTCACCTTCGTCCTGCAGGACGGCGTCGGGG
GCCTGGAGGTGCTCGGGGAAGACGGCCGCTGGGTCCCCGCGGAGCCCGTGGAGGGCAGCA
TCGTCGTCAACGTGGGCGACGTTCTGCAGGTGCTCAGCAACAACAAGTTCAGGAGCGCCA
CGCACAGGGTGGTGAGGAGGCCGGGGGCGCACCGCCACTCCATCGCCTTCTTCCTGAACC
TCCACGGCGACAAGTGGGTCGAGCCGCTGCCGGAGTTCGCGGGCGGCGCCGGCGAGCCGC
CGCGGTACAGAGGGTTCAGGTATAATGAGTACATGCAGCTGCGCATGAGGAACAAGACCC
ACCCGCCGTCCAGGCCCGAGGATGTCGTACACATCACCCATTACCAAATCTAGCTCGCGA
AAGCTTGCTTCCATGATCCATGGCGTACTCTACCTTTTTTCCGTTGTCAAACTTCAGTTC
GTTGTCTGTGGTGTGAACCTAGCCTGTTTTCTGCTGTTGCCTAAGGGCATCTACAATCGG
AGTCCCAGATCGCAGTGGGAGCTCGTATACATGCCGGAGTCAAGCTGGCAATGGTTAATC
CTTATCCGTGTCCCGTGCATAGTTACTCTATCAGGAATGGGGATGTGTCAATTTTAGTGT
TCATGAGAAAGCTGGTGTGTGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAAAG
GCGTAACGATCTGGGCACTGTCTCGGAGAGAGGCTCGG