| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_1570923
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_15522 |
5 |
1569 bp |
MLOC_15522.2 |
Available |
Available |
LOC_Os06g40720.1, FRAME:+3, EVALUE:4e-134, 13106.m04243 protein EF hand family protein, putative, expressed |
| MLOC_15523 |
1 |
1013 bp |
MLOC_15523.1 |
Available |
Available |
LOC_Os06g40710.1, FRAME:-3, EVALUE:1e-45, 13106.m04241 protein Myb-like DNA-binding domain containing protein, putative, expressed |
CDS Structure of MLOC_15522
CDS Structure of MLOC_15523
Contig Sequence (6306 bp)
>contig_1570923 6306 assembly3_WGSMorex_rbca.fasta
TAGGGTTTACAAGTTACTGACTATCAGTCGGGGATAGATGAGCCGACCTAGTCCTTCTAA
GCTTGGAGTACACGCCGGTCCTCGAAGCCTTCCTTCCTGCGTACGAAGTTGTCAACTATA
AGGACTCTCATGATTCGTTCCATGAGCCAGCACCCTGAGGACCCCTTAATCAGGACTCCC
TCAACTAGCCTTATATCGGATGAACCTACCTATCTTGGTCGAGATGGATATCATGGAGGC
GGTGGCCATGATCACGGGGTGTAAGCAGGATAGATCTATCGTACACTAGTAGAGGAGATT
CACACACTGGTTAGTCTCCCCGCTAGGGATATCTCCTTTACCCACTATACGCGCTCGCAG
AACATTGTACGCGCTCGGCTCGGTGGCCACCTGATCGTGATGGAGGGGCTTGGGTGGCGT
GCATGACACTCGGGTGGCGGCTTCGACCGCGAGGAGTGGGCGAGGCGCATTCCTACGCGA
TACAGCATCGCGAGAATGGCCCTGGTGGTGCGCAGATCGGGGGCCCGAGATAGCGAGGGA
GGCGGATCTCAAAGCCCTTCTTCGTCACATGGCAACTCCGATGGTGGGGTGATTGTTGGG
CTTGTCGGCGCCAGTGCGGGATGATGTGTGGCTGTGGCAGTTGGGGTGAAGACCGTGTCT
TGACTTTATGCCGTGGCTAGCGATGCTGGTGGCTATGGCCGTCGTTGACCTTCCCGGAGG
CATTGTTGCTTTGCTGTCGCACCCCTCCCGTGTGGATCCGACCATCTCGGCATCTCCGGG
GGAAACCCTTGATCTATGATCGGACGACGGCGGCGCCTTGGCGTTGCATTCCCTCTTGAG
GGCTTCATCTTGGGAGCTAGGCATCAACAAGCGAGACCGGTGGATGACATCGGTTGTGGC
AACGATGGTGGTGGGAGCGATGTCGCCGACATGGCAATTGTTGCGATAATCGGCTCTTCT
TCGGCGTGTTCGTGCGTCTGTCTCTGTTTGTTTGTTGATGTGAAGTCGAAGCTGCTGCGG
CGGGGCCCTCTGGTATACGATGACTCGCTCGAGGTGAACCGTTCGACGAGCTTTCGTGAC
GCCAACCGTGCCTGGTTTGTCCTTTGTAGCTCTTCGTCAAAGCCGGAGCTGCGCTGCCTG
GTTTAGATGGCTGAGTTTTGGCGCGGTTCTTCATACTTCTTCACGCGGCCTTTACAGTGC
GCGTTGAGTCGATGATCGCCTACGGCAAAGTCGGAGTCGTTTGCTCAGGATTTACGGATG
ACGATGACGCGTCTAGGGGAGGAGTGATGACAATGACGCATGTATGCTGTCTCAGTGATG
CCTTCATTGGTGGGTGGGTTTCTTGTGTGTGCTGCTTAACAGTTGTAATGATTTTCGCCT
GGTTTTTCATGATCAACTCAGCAATCTGATTTTCGCTCGGCTTTTTCTAATTAATAAAAA
ACTCTTTTTTTAATGAACACGGGATAACTATCATTTAAAAAAAACATGAGCTGGAACCCT
ATTGTGGCAGTACTCTGCGCACAAGGCACAACAGTATAGCTGGTTGTCGGAATGGACTTT
GTTGTAAATCTGGCTATGGCTGAGAAGCCCCCATGAGTTAATGGAGAACTTTTTTCCCAG
AAAAACAATAATCAAGGAAATAAATAAAAGGAAACGGCGACAGCGAGACAAACGGTCCGA
GGTCGGCTCTTCATTCACGGGGCACCCGCCACCCGGCGTGTCATCCGGGCGAAGTCATCG
CCATTCCAGAGCCACCCACCCACCACCCTATGCCCCACCTATCACTCCCTGAATCCTGGA
CCCCACCTCGTCTTGCCCCCACATGTCAGCCGCACAAAACCATCCTCGCCCGGTCCTGTG
GCGCAGGCCGTTGCCACCTCACGCCGCTCTCGCCACCCTCCTTCTCCTATCTGCTGCACC
GAAAAGGAAAAGCTTCCCTCGCCTCCCCCAGACCCGAAGGATCCCAGCGGCGAAGAAGGA
AAAATATCGCGCCTCCCCCCGCCGCCGATCAGCGCCTCCGGTTCTGGATCCCCGTGCGGA
TCCGCAGCACCGACCTCCGAGTCGAGCCCAGGCAAGGCAAGCCCATGCTCTACCCACTCG
TAGTCTCTACACCCTGATCGATGCAGCGTGGTTTTCTTGCGGCTGGCCTGTTCGTCCTGC
GCGCGCGCAAGCAACCTGGAGTCCTGGACCTCTGCAGGTTTCTTCTTGGTAGACGATGAT
TTGGCTGTACGCGACAACCCAACTGAGCCCGAAGCCCGATGGGTAGGTAGGATTAGGTGG
GGACTTGCCTGTGCCGAGATTATTTATACTTACTCGTTATTAATTATTGCTGTGAAGTAG
GCCCTCGTTGTTTGCTATCGCGCGCCCTGCCCGTGCCGCCACTGCTGATTTCCTCACTGT
TCATTTCGGGTTCAGTCTTTGCGTACGCGCTGTCTTGTGATTAGCTGATTGGTTGATGGC
TGTGACGATGAATTGCTGGGAGTCATGTTCTTCTCGTGTGAAAAAGAATGATATTTTAGT
GAGTTGTGAATCTGAGTGCGGTGACTAGCGGCGAGCATAGTTTGGTTCTGCTACTACTTG
CAGGATATTATAGTGCTCTGAAGCGGTCACCAAAGGTTGAGACTCATTTTCAGGTGCTGC
TACTGTTTGGTCATTTGGTGTGTATCCACTACCAGTTGTGGGCACTGAGTGAAGTGAAGT
GCTGGCATGGGGGGCGTGTTTGGACGCCACGACGCCGGCAGGCAGAGCTCCCACGGTATG
AAGCTAGAGTCGAAGATGGTGGAGTCCATGAAGCAGAGAGCGTCGCATGGAACTTCGGTC
AAGTCGTTCAACAGTATTATCATGAAGTTCGCGAAAATCGACAAGGGCTTGAGAAAATGC
AAGACTATCTTTCAGCAATTCGGTGAGCCCTCTTTGTGTGCTAGTCAGTTTTCTCTTGTC
CTTCTAAGTTCATAGCTAACAAATTGCGATGGAGATCTTGCTTGCTATGTTTTCAAGTTA
TAATGAAGGAGGAGCGGGTCAATAAATTGTTGATATCTGAACTCTTGTTTCACTTATTGT
TCCTTCCAATAAACTGTTGAGTTCAAGTGATGTTTTACAGTGCAGCAGTGCCTATGCGGA
AGAATGCTGCCCTTTGACAAATATTAACCGACTTGTGCAAAGGAGCATAATTAATTTAGG
CATTTCTTGCTTTTTGTGTAACTAACAGATCCGGAACTTGCTTCCTACCTTTCTCAGATG
AAGATTCCAATGGTGAAATTGATAAAGAAGAGCTCAAGAATTGCTTTCAGAAGCTGGAAA
TCTCATTCACAGAGGAGGAGATAAGTGATCTCTTTGAAGCTTGCGACATAAATGAAGATA
TGGGCATGAAGTACAATGAGTTCATTGTCTTTCTGTGCCTTGTTTATCTTCTCAATGACC
CTGCTGCATCAGAAGCAGTATCCTTCATTCTTTATACACTGTTTCCCGTTAAAAGGATAT
CATATCATAAATATGATTGGATTATCAATATTTCTTAGATGATATTCACGGACTTCTGCA
TTCAGTTCCTGTTTTAGTTCTCGTACACTAATTATGCAGGAGTTTTACTGTTTCCTTAAC
TGAAAACGCAGAAAACAAAGATGGGATTAGGAGATCTTGAGTCAACTTTTGAGACCTTGG
TTGATGCATTTGTCTTCTTGGATAAGAACAAGGATGGGTATGTGAGTAAGGATGAGATGA
TTCAAGCAATAAATGAGAGCATACCAGGGGAACGCTCTGCTGGCCGTATAGCCATGAAAA
GATTTGGTGAGTTCTCCAGTTCGTAGTAGCCCAATTTCTTGGTGATTTTTTTTGGAGGGA
ACCAGCACATCTTATTCCCCAGTCATATATATTTGTGAATCGTCACATCTTTTTCTCATA
CCATATTCTTCACCCAAAGGAAAAATAAGGGTGTGGATCTGGCAAAAATGTCTCTTGAGA
TGAATTATTCCCATTAACTGAACATAGAGCATGATTGGTTTGATGCCAAAAGTTGTGATG
CCAATATTTGGCTACTGATTGATTGGTTACCAACTTCTCTTGCTAACCTCACGAAAAATT
GCAACTTTTGGCAACTTTTGAATTTGCCAAATATTGGCTTGTCAAACATTGGCAATGCCA
AAATCAAAATATGTTGGCATCAAACCAATTATGCTCATATGCCTACTAAATAAAATGACT
AGCTCTCTAATATCTGTTCGCCCTTTTTGCTGTTCACTCTGCACTCATGAATAGTCATCT
AGATGAAGAAAACTAAATATGCACAGGAAGATATGCTTGACACTGCTACTAGTACCACCC
TCTGACGTATATCCATTTTTTTCACATGGCACCAGAGGAGATGGATTGGGACAAGAACGG
GATGGTTACCTTCAAGGAATTTCTGTTTGCATTCACTCGCTGGGTTGGGATAGGCGAAAA
CGAGGACGAAGATGAATGAATGATGTGGAAGCTGACAGCCGAAGAATGGCTGACTATAAA
TTGGTTGCGTGGTGGTTTTATCTTTCTGTTAATAGTGACTCGGCATGTTCCATAGAAGGA
CTGACATGTCTGAACACCTGTACCAAACAGTGTCTGTGACGGCTTCGCCTCCATTGCAAG
TTATGTTGTGTAGTAAGCAAAATATTGAAACATTGATAGCAAGAGGGCTCGTGTCAGCAA
CAACCTTGGCTCACCCATGTTAATTTGGTCTTGTGTAGCTTAATACTACTCTGTTCCTAA
ATATAAGTCTTTTTAGAGATTACACTATGGACTACATACGGATGTATATAGACATACTCC
TTTCGTTCCATAATTCTTGTCGTTGTTTTACTTCAAAATTTAAAATAATAACAAGAATTA
TGGGACGAAGGGAGTACTTTATAATGTAGATTTACTCATTTTGCTTCGTATTAGTCTGTA
GTGGAATCTTTAAAAAGGTTTATATTTAAGAACGGAGGGAGTAATTGACACGCATCATCT
CTATCTAGGCTTGTATTGACAACAAATTGTCAATTCAGTTTAACGACCGGATACAGAGCC
CAAAATCATGCAATCTGAAGCCCGATAACAGCAATTTCACCGTGATTAAGCTCTAGATCA
TTACATTACAATCTGTTAAAATAGCATGGAACCTCTGACAGAGTAAACACAAGTGGTGCA
ATACAATACACATCAAAGACATGGTCCACGTCATCTACGTCATCTACTCTCTTCCAAGAC
AAATAGCTCTAGTGACTGATAGAGACAATTGGCGAATACTAATCAAACGTCACTGCCTGA
GCCATTGGTAAAACCATCTTCATTGGCATCGAGAGCCACCGATGAATCAGATCGCCCTGT
GCCGGATGAGAACACCGAGCTTCTCAGTTGCAAATCGGAACCCGAGCTCGACTCCGGAGT
GATGTGAGGAAGTGCAAACTCGTTGTTTCCGTCGCCAAGGTTGTTGCTGACACGAGCCCT
CTTGCTATCTCTGGGGCTGTTTAGGAGGTAACCGGCACCACAACTGGAATCCGGTGTCGA
AAGCTCACGGTCCAAGGAGAGGCAGTCGTCATGTGAAGAAAGAACCTTGAGCAGCTCGTC
TGTTCCTTCCAGATTACAACTCGCAGTAACGGCCTTGTCCCGGAATGGGGGCTCCGAGGT
CAGCACTGGGGTCGATGGCTCAGTGTTGCTGAAATCATGGTGGAGCTCCTCCTCAGCCAG
GGCGAGGGCGTTCATCTTACCTGATTCGCACAGCACACCAGTCAGGCGCTGCTGCTCCTC
CATGATCTTCTGGAGATACTTGCCTTGGGCTTCTATTCTGAGCTGTAGCTGCCTTTGTAC
CTGCAAATATGTTTTGCTGAAGCAGTTAGTGATATAGTTTCCTGCAATTAGAAGGCAAAG
ATAGAAGCTTCGTATGACACTGCTTCACTGCCTGAAAAATTGTGCATGACAAGACCAGTT
ACACCACTGTGCTTCCTACAGCAGTTTCACTGCTGGTCAGAGACCAAATCAAGAGCTCAT
GTGAACAGATGATTACTGACACAGGATTATGTCATCCGACAAATATAATATTTGCAAACT
CTTATTTAGGTTTTATTGCAGAGATGTATTTATTTAGCGATGATGTGTTTATTTAGGTCT
TGATGGTGTGTTTCAACTTCAACTGATTTTTGCAATACGATGTGTTTCAGCTGATTTGAA
GCCAGGCAGAGAAATTTGTATGCATGATACTCCCTCCGTTTCTAAATANNNNNCTTTCTA
GAGGTTCAACTAATGGACTACATATGGATGTATATAGACATACTTTAAAGTATAGATTCA
TTAATT
