Contig Data
morexGenes
Links



Map Locations of contig_1570779 (5626 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1570779

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15470 2 3194 bp MLOC_15470.1 Available Available LOC_Os08g32650.1, FRAME:+1, EVALUE:1e-161, 13108.m03394 protein cation efflux family protein, putative, expressed





CDS Structure of MLOC_15470






Contig Sequence (5626 bp)

>contig_1570779 5626 assembly3_WGSMorex_rbca.fasta
GCCGAAGCGCGCGCGGCAAATGCATTTTTTGGGCGCGGCGCGTAGCGCGGCTGTTGGAGA
TGCTCTTAGGAGCGTTTTAATGCGTTGGCATTACAGATGCCCTAAATTAACAATTATTGT
CTGTTTTTCTTGGTAGAGTTGCTGTGAGGCCATCTGAAAGGAGAGCAAGTCAAAAAAGAA
CGGAGACCGGGTAGTCCACCGCCGTCCCTGACCACACTCTCCCCGATCCGATCCGCCGCC
GATGGCCGCCGCCCCTCACCGCGCTTTCCCCGATCCACCGCCGATGGCCGCCTCCCGCTC
TAGCCGAAACGCGGCCCACCTCCGCCTGGCCGTACCTCCGCGACTCGCCGCCCACCCCTC
CTTCCGCTTCCCCACCACGCCCCTCCCCACCCCATCCAAGACGCGCCTCCCCGCCGCCGG
CGCCGCCTCTCCCTACGCTGCCGCGCTCCTGCGCGTCCTCGCGCTCCACTCCTTCTTCCT
TCTCGCGCCCGCCGCCCGAGCGCTCCCCTCCCTGCCCCACCTCTTCCTGCTTCCGCCGCT
CCTCGCCATCATCTCCGCCGTCGCCATCCTCCTCCTCCCCTCCAAGAGCCAGCCCCACCC
CTTCCCGGCGCTCCGCCACCTCTTCCGTCCCGCCCTCCTCCTGACGGCGTCCCTTCTCCT
CCGCCTCGCCTCCCTCCACCTCATCAGTGACCCCGGTCTCGTCGTCCTCGCAGATTCCGC
CGGCGCGTTGCTCGCCCGCGCCCTCAACCGTCCCTCCCGCCGTCGCGTTATCTCCGTCGC
CGCCGCCTCCGTTTCGCTCGCGGCCGCATCGCCTTCCCACTCCGTGCTTCTCCTCGCACT
CCCCTTTGCTTCCGGCCTCCTCTCCTCGGTCGAGCACTCTGTATCTGCGCGACATGTCAC
CCGCAGCCGCCACGCCCGTGCGGCCGTTTTTGCCCTCGCCGCCACCTTCCTCTCTGTGCC
GGCACTTGCGGGCCTCTTCTTTCTTGGTGGCACTGACACCAGCCATGGTGTCCCGATTGG
CCAGCTCTGGTGGTTGCTCCTTAACGCCGCTGTCTTTGGCATGGCCTTGGGGCGACGGCA
GGCCTACGACAGCAGTGGCAGTAGCAGCAGACCAAGCATGAATTTTGCAATGACTTTTGT
CTGCACTATTGTTCTGGAGCTGGTGTACTACCCAAAGCTATCGTTGCCGGGCTTCTTAGT
TTGTGGGTTCATCTTGTGGATCGCCAGCAGGGAGCTGACTCCTTCAGGATATGTTGAGCT
TGGGAGCGCTGACGAGTCGGTGTATGAGGCAGTCATGGGGCCAGTCCGGCATATCCTTAG
TGAACGCAAGTCCAGGAAGATTGCTGCTTTTCTGTTGATCAACACAGCTTACATGTTTGT
TGAGTTTGCCAGCGGTTTCATGAGCGATAGCCTTGGGCTGCTCTCTGATGCTTGCCATAT
GCTGTTTGATTGTGCTGCTCTGGCAATTGGACTATATGCGTCGTACATTGCGAGGCTGCC
TGCAAATGGATTGTATAACTATGGAAGGGGCAGGTTCGAGGTGCTATCTGGGTATGTTAA
TGCAGTTTTCCTAGTACTTGTTGGGGCCCTGATTGTGTTGGAGTCGTTTGAGAGGATACT
CGAGCCTCGGGAGATATCAACAAGTAGCCTTTTGGCAGTTTCTGTTGGTGGACTTTTCGT
AAATATCATTGGATTGGTTTTCTTTCATGAGGAGCACCATCATGCGCATGGCGGTAGCTG
CTCTCACTCCCATTCACATTCTCATTCTCATTCACATGATCATGGTCATGAAGATCACCA
TCACCATCACCATCATGATCATGTTCATGAAGATCACCATCATGATCATGTTCATCAGAG
TGCTGATCACAAGAAGACTTGTTCTGGTCATCATGGAGAAACAAATAAGATCCATCATCA
TAGTCACCAACATGATAGTAGCAATGCAGAGAATCATCATCAACATAACCATGGCTGTAG
CCACAAGCATGGTCACAATGGCCATATGGAACATCACCACCAGGGTGTAGATCAGGCTCA
TCAAGATTGTAGCAGCTTCAGCAGCGAGCAAGGACTTCTTGAGATTCCACTGATAAATGT
GCACTCTCATGGCACAGAATCTCAGTCTGGTAATGGAGAACTGGAATTGCCAGAAACCGG
AAACCATGCCAAGCCGGCAAGCCGGCGTCACATTGACCACAACATGGAAGGTATCTTCTT
ACATGTCCTGGCTGACACAATGGGAAGCGTCGGTGTTGTGATATCAACCCTACTAATCAA
GTATAAGGGATGGCTAATAGCAGATCCCATTTGCTCTGTATTCATTTCAATAATGATTGT
AGCTTCCGTCCTTCCATTGTTGAGAAATTCTGCTGAAATTTTGTTGCAAAGAGTTCCAAG
GAGCCACGAGAAGGACTTCGAAGCAGCAGTGGATGATGTTAAGAAGATTAATGGCGTGAT
TGGAGTCCATAATGTTCATTTATGGAACTTGACAAACACCGATATTGTAGGCACTTTTCA
TCTTCATATATCAGCCGAAGCTGATAAGTCTGTTATAAGAGAAAGTGCTTCACGGATATT
TCAAGAAGCTGGGGTTCAAGATCTGACTATCCAGATTGAATGTGTCGAAAGATAGCAGTT
GTAGGTATAGCGACACTTGTCGGTAGTGTGATAGGATTTTGGCAGAGAGCAAATATATCT
GTAGTGCTTAATGCAGGAACCATCCTTTATGTACCGCTGAAAGGAAATTGCATTATTAAA
ATACAGGTTTGCAGCTTAATCATTTTGGTCTGAGCAACTTAATATTTTGATGTTGTATAT
TGTCCATATCGCATATAGGCTTCACAAAAGCTTTCCTCCAGCCCTAGGCTCCAATCACAT
GATGATAAGCAGTTTAAGCTTAAACAAGCAGATTAATAAAGAAAACAAATAGCACAATGC
CAGCAGAAAAGAAAGGAAACCAGAGAATAACGCAAGTTCATTACATGACCATATATAACC
AGTTCAAACTTGAGCAAGCAAATGAATGGAGAAAGCAAATTAAGTAGCAATGCAACGAGA
AGTGAAGCCTCTAAATTAAGAAGTTACACTGAATAGTGCAAGCGCTGGCGTTGTTGGAGC
AGGGCAACAGGAACCTTAGTTCAGCTCAGATATAATCCGTGTGTATCTTCGACATCAGTC
AAGGAATTGTGTCCATTTCATGCATCCTCTCTCATTCATCACCTGCTACATGCTCCGTCA
ATCCCCACTGGCCACCACTGCTGTGATTTTAGCTTGTGGAAGCAATGAAGAAATATGTGG
GATCTAAAATGAAGCATGTCGAGAATTACTGAAAGAAAGCATCAGATGGATGAGTATACG
TGCTCCAGATATATCCTTTTTTGTTTAGCTATCATTGTAAACATCATAATAGTCATCATC
ATCCTGATCATCGGTGTCTTAATTTGGAGATTGAGATGCCAAAAAGAGAAAGAGAGTAAT
TAATGTCAATATATAATTAGGAGGCATGTGCATGTATGTAGGACAGCTGCAGGAGTGTAG
AAAGATGGAATAGAGAAAAAACACTGAATTCATTCGTTGATGAGTATCACGTGTTATTAG
ATGATCAATATTTAGTTGTGTAATCCTCTGTTTTGCTGCTTACTGGGAGAGCCTATATGC
ACTTCCTATTCTTGCTATGGAATCTATAAGTTTGGTCCCAACTCTTCTTGCTGCAGGACC
TTTTGTTGCTTGCATCCTCGTGTCTTTAGGCAAGGAGTAAACTATCGTTTGGAGGGGAAA
AGACTGATGAAACCATACATGATAGTATGCAAAAGATATTCCCTTCAGTTCTTGAATCAG
AGTGCAGCAGTGAAGAACAGGATGCTTTTTTGGTTGATGAATTGGTCCGAAACTCCGAAT
AGATTGAGAGGCGGCGGCCATCAGGTTCCTCTATTTTGGTCTGGTAAGGAATGCTCTATT
GGGGTGTTCCCATAATTTTCGATGTGAGTGGATCTTTGAAGTCCTTTTGATCTGCAAAAT
ACTGTGAATATTGTGGACCGAATATTATATACGTTAAAGCTATTCGTTAATATTTTTGTA
TAAATGTGACCCATGGTAGTTAATTTCTTGACCATTTTGTGCCTATAATATCAGAGCTTT
TTTCTTTCCCTTTTCCCTTCTACAATTTGGAAAACGTTGGGAAATGCCATGATCTGAAAC
CTGCCATACGATGTGTCATGCAGGTTCTCGAAGGACATGAAGTTTGAGTTTGACGATGTT
AACGCGGTGCAGATGTGTGCAGACATGCTGATATTGAGGAAAGAGTTCAGTGTGAACATG
ATCCTTGAGGTGATCGCACTGACCTACAGCAATGCTGCACTTGCTGCAATCTTTGCTTAA
TGTCCAACATGTGGGCAGCTTTGTTTTAGTTTGACCGACATTGGCCCGTCCTCCTCTGCG
CTGTCCCTGGTGCCAAGCATGGTCTCTGTTGCAGCAGCTGCCGCTGCGTTGCTCCCTCTC
GCATGCTCGTCGTCCTGCCTGCCAGTTGGTCAACGAGGCAGCAGTATGAGATGTTTATCG
CTGGTCTGTTGCCAGTTTTCCATGGACCATCCTACTAGCATAACAAATAGATGCATCTAT
CCAAGGAACCAAGCACCTCCCAGATTTTCTCATATATTTGTACCGTATGAATTTTATTGT
TGTGTTGTCAAAATAGAGGATCATGGCTGTAGCCTCCTAAGCACAAGTTCTGGTGCTCTG
TTTTCCAATCTTCAGTTCTTTACCGAGAAAAAATGACGGTGTGGCAATGCCCGGCATTAT
GATCTAGTGTTCCCTATATAAGCAGGTTTGATGTTGGCAGGGATGCTTGAAATGATAAGC
ATATAGTAGTAATATAAATTTCCTCTTGCGGTAATACTCCGTATATGTTTAGCGGCAGTC
AATGTTATTTTTATCTTTGTTGCACATACCATGAGCAACAATTCATTACTCAGTCACTCG
ACTATTAGTGGGATATATGGATGCAACAAAAAGAAACTCAATTACCAGTCCAGTTTTGCT
CAAGAAAAGGGGGAAATTATATGCTGAATCCTACTATTGAGGTTAGTACTATCCCTGAAG
GAGTAAGTACTGAGATGAATCATCCCCTAGCCACTGTTACAGCCGATTGACAAATCTCAA
CAACTTATTAAGAATAATGAAAACAACGCAGATAATAATCCCTACTACTATAGTACACCA
ATTTTCAAATTTAGATTAGCCACTCACAGTGATGCAGAAGCATCTGTTAGCCGTTAATTT
GTTTCATGGAATGAATCACAGCCATTTATCAATGTTGAACCCAACTGATCTGACGGCCAT
GATTTGTGTGATCCGCTCAGCACGGCCGCGCGCCAAATGTCGAGGATCTTTCTAGAGCTA
AAGGCAGCTGACATCTGACCAACCTGACACTTGTCGGGAACTTTCTCGTGAAGAGCTGCC
GAGCTAGCTTTAAGTCGCTTTCAATGCATTCATGCTAAGATGAGGTGTTAAACACATTCA
GGGCCTGTTTGGGACAGCTCTACTTCATAAAATTCAGTTCCGCTTCATCAAATCCACTTT
GGAGCAGTTTCATATAGAAGTTGTGACTCTTTTAAGAGAGTGTTTG