Contig Data
morexGenes
Links



Map Locations of contig_1570690 (3792 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1570690

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15439 1 778 bp MLOC_15439.1 Available Available LOC_Os04g54240.1, FRAME:+2, EVALUE:6e-15, 13104.m05607 protein wound induced protein, putative, expressed





CDS Structure of MLOC_15439






Contig Sequence (3792 bp)

>contig_1570690 3792 assembly3_WGSMorex_rbca.fasta
TACGGGTATAATTTTTGCAGTGAATCGTTTTTTTTCCGTTGCAGATAAATGATGGAGCGC
GGGTTGAATAACAAAAATTACAGGTTTTTTTAATAAATATGCCGCGGTGGGTTTTCTGAC
GGAAGCAATAGCCGCTTTATTATTAGGTATAGATTTAATTAACATGAATAACCACACCAC
GAGCAAAATTTATATCATTGAAACTTTTTTTAAATATCAATTCAATGGAATAATTTTTGT
CTCCGTGGCAATCATCTATGTTAGGTTAAATATGGTTAGACTTATATCATAAAAAGTGTA
GACCCACTACATTATAAAACGGAGAAAGTATTTAATGGGGCCTCAAAAATGAAAAGACTA
CTCAAGCGATTAAAAAATATTAATAAAAAAACGTTCCTTTAGGAGCCTTTCAAATGACCA
TCTGGAGTGGGCTGAGAGTGCGTCAGCCGTCGTCATGTGTTGCGTTTTGGATGTTCCTTT
TAAAATTTATTTTTGCATTTTCTATATGCATTTCGGATCTTAGATTATTATGTTTTTGGT
TTTACGGTTCTTGTGTTTTCCATGGCTTGTCTTAGGTTTTGGACCCAAAAAAGTGTTTGA
ATTTTTTTTTGATGCGAATAAAATGTGTTTTTTTTCTTGCTCGATAGGCACGAATTTACT
TCCGCGAGATGCATGACCATGCCTCCCGCAAAAGGGGAAAACATGTTTTATTCAATGAGA
GGCACGACCATGCCTGTCGGAAAGAAAAAGAAAACATGTTTTTTTTCACGAGAGGCACAT
TGTTTTTAAGGGACAAATTTTCTTACGCGAGTGGCACGATCATGCCTCTTGCAGAAGGAA
AACCATGTGTTTTTTCCTACCATGCGAGGTATGGATTTTCTTCTGTGAGAGGCATCACCG
TGCCTCTCGAAAAGGAAAAATACTTTTTTTTTCTTTTGCTAGAGGCATATATTTACTTTT
CGTGGAGGCACAAATTTGCTTAAGTGAGAGAAACGTCCGTGCCTCTCGCAAAAGGTACAA
TGTGTTACCACGAGAGGCATTGATTTACTTCTTGTGGAGCCATGAATTTGCTTCTGCGAG
GGGCACGACAATGGCTCTCAAAAAGGGAAAAACGTGCTCTTGGTTCAGTGTTTTTCGTCT
GATTTTTTTTTCTAAAAAATATCTTTGAAACCTATCAATATAGGATCTATTTTTAAAGAT
CTCGACGCAAGGAATCCAACGTGAGAATGGTTTGATAGTTGGATGCAGAATTTAAGAGAT
AATACAGTTTGAATAAACGAATCCACGAAAGAAAGGGGAAAAACTCATGTTGCAACAAGT
GACGTACATGCGGTGTGACACTGAGAAGGTAAAATTGACCTATGCAAAGAGTGCTTAACT
AGTGATTTCGGTATTTAACTGGGGCATGCTTAGGTCGCAAGGCTGGACACACATACCAAC
ACGACATGACCCATTAACTTTTTTTATTTTTCCAGTTTTCTGTAGTATATTAGCCTAGAA
AATAAGGAGTAAATAGCAAAAAACAATCACATTTGGGGTTGGATTATAAAATATACCACT
TTCTTTAATTTTTTGAAAAACGATTACTATTTTGGTTGGTTGTTCCTAAAAAAATAGTGA
TTGAATCAGATGGGATAGTGCGTTAAACGTGTTAAAAGTGTGGCTGGCACAAAACGTGTG
ACTAACAAAATGGCTATCATAAATGTGGTAAGATTTAACAAAAACAAACCTATGACATGT
GGGCCATACAATTTAAAAATCATGACAAGTTGTAAGTATGACAATGAACCAAACACATGC
CTAAGATGTTGTGACATGACTAAGATTAAACTTGACAACTTTAAACTGAGAACCAAACAT
GCCCTTAGTCATGAACCAAACAAGCCATTACTCTTATGTTTACTGTTCCCTATTCATATG
AAACAAAGAGGCCTTAGACTTTAGGCATTTTTTGGAAGTCAGAAAAAAATTTCTGAGCCT
GTTTAGGACTGCTTCGCTTCACCAAAATTAATTTTATTTCATCAAATTTTATTTGAAACA
GTTTCATACAGAAAATTGTGGCACTATTAAAAAAAATAACTTTCATCTAGCTTTAGCTTT
AAGAATGAAAAATTTGGTGAAGATGATCTATTTAGTTGAATGGGGGTTGAGAAACGAAGG
AGTATCCACTTAATATTGACATTCGTGGATAATTTCGTCCAACTCTAGCTTTTAGAGGTT
TTTTCGGAACATTACTGAAGAATTTCATAAAAAACTGAAAGTTGTATAACAAAATATCTA
TTTTTTCTACATAGTGGTGTATCACGATTCATGGAGTTATCCCGTTTCGTTTGTGAGTGA
AGCTGAAAACAGGCTCCCGGTGAACGGTAGGTAGTGTGCTGCGTGGCATCTGCGTCCGAT
ATGCAGTATGTCCGTTCCATAAAAGATATCTAGAATTAAAACAGAGTTGCGCGCATCCTT
ATCTTGGGCACATGGGCTAGCGGCTTGCCGGCAACAGACAAAGTCACATAAGACGAGACG
AGGTGGGCAGCCACACCACGGTCACCGAGCGAGGAAAGCGATCGGTCGGTGCACAGGCAA
GCAAACCGGGGCCGAAAGCACCCAGTAGGTATCCTGGAAAACTAACGTCCGCGCCCGCCT
GTTTCCCCCCGCCCCTCCCGTATATATCATCACCCACCCTGCCCCAGCCAACAACTCACC
AACACAAGCTTCCATCACCTCAGCTCACTTCTTCCACTACCACTGACCAATCATCTACTG
GGATCACACGATTCACGGACCAGCCCCCACCCACGCAGTCCACAGATCAGCTCATGGCGG
CTGCAGCGAAGGCGTCGTGGATGGCGGCGATGAGCGTCGGCGCGGGAGGCGCTCAAGGAC
CAGGCCGGCCTCTGCCGCTGGAACTACGCTCTCAGGTCCGTTCACGGCGCAGCCAAGGCC
AAGGCCACCATCCGCGGTGGTGTGGTCTCGCAGGGCACGAAGCGGCTTCCGGCCTCTGCG
GCGGCCGTGGCCGAGAGGCGGCGAGCGGAGGAGGCCCTGCGGACCGTCATGTACCTCAGC
TGCTGGGGTCCCAACTAGGCAAGGCCGGCGGTTCCGCTTGCTTCACGTACGGCTTGCTAC
TTGCCTCGCTGCGGGCTGCGTCTGGGTTGTAAATAGTACTATCACGATGATGATGAAAAC
TTCTGTGTTCTGTCGCTAGCTTCAGATCTTACGAATAATTACAATGCCCTTGCTTTGGGT
ACCTCTATATATTTGCTTCAAAGTTTAGCTATAGTTATTTTGACTTGGCTATAAGTTATG
GGTTTCGCTCACTCTGCTAGTACTTCGATGTGAAGCACAAGATCCATGGCCACATTAATC
CTGGTCTGCTAGTTCTCTGATCCAAGTGGCAGAATTGCGAGGTAACCGAGTTCTCTTTGT
ACTGTAGTTTCGTTTTCTTAGCCATGACTGAACATTTTCCGAACCATGTTCTTCATACAC
ACGATAATCATAACTGTAACATGACTGAATCGGATGTGAGAAAAAATATATATATATATA
CCTATACCTAATTTTTTTAATAATAAAGAGGCCATTGCTTCCGTCGGAAAACCCACCGCG
ATATTTTTATAAAAAAACCTCTGTAATTTTTGTTATTCAACCCGCGCTCCATAATTTATC
TGCAACGCAAAAGGAAAAAACGATTCGCTGCAAAAATTATACCCGTAAGCATCGCCTCCT
CCCGTCAATCTTGGGCCACCCTGACATGTGCCCAGGCCGTTGCCATACCACTCGTCGCCG
CGGCCGACCTCA