Contig Data
morexGenes
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Map Locations of contig_157062 (4030 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_157062

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15412 1 179 bp None Available Available None
MLOC_15411 1 905 bp AK370897 Available Available None





CDS Structure of MLOC_15412






CDS Structure of MLOC_15411






Contig Sequence (4030 bp)

>contig_157062 4030 assembly3_WGSMorex_rbca.fasta
AAAAAAAAAAGAAAAGAAAGAAAGAGTAGTAGAAGCAGTAAGGAAAGCAGTGGGGGAGAT
GCGAGGCATCGCATCAGGGCTTACGCACGCGACGCACACAAACCCGCCCCTCCTGCAAGT
AAAACAGGGCACACGCGTCGACACGGCTCCGCTCCGGCATATGCCTTTGCTTCCCCGATC
CTCCCCTCCCCTCTGGATTTTACTTTACTGGCCCGTTCGCCCCCCTCCCCACGACTCAAA
CCGATCCCCTTCCCCTTCCCCTTCCCCGAATCCGCTCGCCGCCGCCGTAAAACCCTCTCC
GCCCTCCGCCAGCCCCGCCGCCGGGGAGAGATGGTGCTGTGGGAGATCACGGCCATCACG
GCCTACTTCCTCGGCCTCCGCCGCACCTACCGCCTCGCGCTCCGCGGCCAGCGCCGCCTC
ATCGGCCCCAACCACCCCAAGCTCCGCGACTTCGTCTACAGGTACGGTACTACCAAATCC
CCCCCTCCCTCCCTCCTCGCACTCTCTTCCACGAGGCCCGGTCCGGCTCGTTACCCAGCC
TCGTGCCGCGTCCGGCCCTCGCTGGTTCATTGGACATCCTGCCCTGCCCTGCCCTTTGCT
CCCGCGTGGCGTGCTTGTCCGGCGAACCGCCTACTGTACCAATGGGTACAGCGTCAGAAC
AAAGGGTTGGGTTCGGATCAGGGGAAGCTTGGGCTCAAATCTGTGGTCAAGCCGCCGCCC
TGTGCTGCTACCCAGCGTCGTAGGATGTGCTTCCAGCTAGAGGTCTCAGACATAAAAAGA
TAAGCAGGCGTTCCTGTTATCTGATCATTAGAGAGCACGAGTGATAACTGCTGTGCTGCT
GTGTGCTAAAACTTGTAGCTGGGAGGTTTCATCTTTTACTGGCCCAGAGCATTTCTAGCT
TTAAGCCGGCAATTTTTATAGGAGCATTGTATTGTACTACTTTTGAGCCGATTCACTGCC
GCTCGTTTGGAGTTGAGAAAAAGCCTAACACGCTTCAGTTTGCATACGGTCTTGAGAGTT
CATTTCTCTGCTTACTTTGTGCTGTTTGGGTTACCTACTTAGTTTAGATTGCTTTTGAAA
CATAAACATAACAGGCAGCACTTTGTAGCTTCTCTATGTGTTTGAATTGCACGAGACACC
TTGTTGTAAATACTCCATCCGTCCTAAAGTTGTACTAAATCAAAGACACTATTTTGGGAC
AGAGGGAGTAGTTGATATTGTCTTTGTGTAGTGTACTTTGTTCTCTCTGAATATTCCCAG
CAGATAAATATTATTGCATTCCCTTCCCTTATACACACCCCTTATCCTGTGTAGGATTCA
GCCTGAAAAACTTTGATTTCAGTTGCGTTCTGTGAAATAATTATGTTTGACTCTGGTGTG
ATGTCTTGTACTGGTTTTTGTAAACCTGATGCTGTCTTCTGTGCTGAATCTGCCCGTACT
AGTGATGACTGCTTGTCATCAATACCCAAGATGGGATATGCTTATTGAAATTGCCAGTGC
ATTTTGGGACCAAATAATGGTTGTCAGTTTTCGATCCTAGCCAGCAATCAAGATTGATTT
GACCCTTTCTCTTCTCCATGTTATGCAGGCGGACACGTTCTATATTCGATGTCGCAGTCT
CAGTGCACAAGAACATTCAGGAGAGGGACTTGGAAGTTGGTCGGAACGTCGGAAACGCGG
TCCTTCGCTGGCTCGACCGCATGAAGCCATCGGCACAGATCCGCCCCCACCCTCCAGGCC
CGCCAGGCGGCAGCCCGGAGCAACTCAGGCACCTCTCGACCATGAACAAGACCGCAGGAG
CTCAGAAGCCCGCCTCCAAGACCTCCACGCACGACTCAAGCGGGAAGATGCTGTTCTCGC
CCCTGAACATCCGGCCCAAGTCCTTCCCTATCCTCCCCACAATGATGCAGTCCACCAGGA
TCAGCGCGAGCAGCCAGTGCAGGCGCCTCTCCACCTCGCCGTTCCCGTCTGTCACCGCCA
GGAGGAAGGACATGATGGAGGGCGTCTTCCGGAAGGACATTGCCCAGCTAATGGTGTAAG
GGATGTCTGTAGGTAGCTGTACTGCTTTCTATGACTTTGAACACTGTTTACTTGACTGGA
ATTTGGCCTGGAGCAGAACTTGTCACTGGATCTGTAATAATGGTGGAGTGCTGAACATAA
TCGCTGTTGCTCCGCCTGTTTTTGGCCAATATACATTTTCTGACAAATCATCATACGATG
GGACTTGGATATACTGCTTGATTTCTTCTGTGCTGAGGTAGCGAGTGGCCTGCAACTAGG
ACTGAAATTTGTCGGTTCGGCTTCTCTTTTTATGTTGTGGATGAATGTATGGTACTCCCT
CCGTCCCGAATTACTTGTCGTAGAAATGGATATATTTTTGCGACAAGTAATTCAAGAGGG
AGGGAGGGAGTATGAAGCAACCATAGATGCTGCTGGTCGAGGTGGTGTTTTCCACTGAAA
AACAGCTCCTCTTAACTAAGAAAAATGGCGATCAGAAATCAGTTGCACTAAGGGGTTTCC
TCCGCCCCCATCCTCCTCCTCTTCCTGCCTCCACACCCACCGACTCCGTCGAAAGGGGTG
TGAGACCGATCTGTCGGTGGGAGTCATAGTTTCCTCCTATTGGAGCATTAGATAGGTCTT
TGTTTTGCTGCGACGAGATCATGGTGTCGCCCTTGGCATGTATAAGTTTTGTCTCACTCA
TGTTGTCTTTCGAAGCGGGCAACATGGTTGTACGTCTTGATCCTCCGATCTATGTTCTGA
CCGATGATGATTTGCCGGTCTCGGTCTCGATCTCGTCGGATAGCGTATGAGGTTTGTGTT
TTCTGACTCCATTTGGTTGGATTGTGCAGAGCTACAACTCTACGTCGTTTTTTCCTCCGA
GTCGGTCATTTGTTACATAGATCGTGGTCACTACTGTCTTCTGGTCTATGTTGACAATTT
ATCTGCCGATGCTTCTACAAGCTCTCGTGTTTAAGAAAGTTTGCTCCGCTGAGACGAAGG
CCTAGAGTCAGTAGTGAATTTTGCTCACGGTTTGTCGGTGGATGCAGGAGGAAGAAGACT
TCAGCACCCCTAAGAATTTGAACCTTTTTTTGCATTCGGTAAAGGTGTTTTTATGAGTCC
ATCCTAGTTAATGTATAGTCATTGGCTACTTCGCAAAAAAAAATTCAAGAAAAAGGACAT
GCTACTGCTTTTCATAAAAAACAATTTATTTTGCTTTGAAGATATCAACTCACATCCCTC
TAGGAAAAAAGAACTTGTAATGTGTATGTATTTTCTTGATTGAGTTGGAGTAATATGCAT
GTAATTGATGCCTCATTATCATCATCATCATCTTCATTATTATTGTTGTTCTTGTTGTTG
TTATGGACACTTACACCATAAATCAAATGTCACAATGTAAAAAAACAAAGTCACTCAACC
AAAACGTATATTTACTCCAATAAAATGTATGACATGCCTCGCAAAATCCTATTGAATTAA
TAAAAGATATAGTATGTTTTACTGAGTTTTCTATTGTTAAAGTAAATAGTAAAATATCAT
GTGTTCCGTAGTTAAGAACGTTTGACATTCAAAGAAACATACACTATACCACATTCTTTT
TTATAAAACTTTACACTGTACACATTCCTTGGAATATTACACACCTACTTCCTCCGTTTC
TAAATATAAGTCTTTTAAAAGATTTCACTAAAGGTCTACGTACGAAGCAAAATGAATGAA
TATACACTCTAAAATATGTCTATATACATCCGTATATAATCCACTAGTAAAATCTCTAAA
AAAAAAAGACTTATAAGAGTATTTAGGAACGGAGGAAGTAACTTTTTTCACCAGGCTGAC
AGAAACAGAGCTACTACGCCGCAGCCAGATCAGAGAATTAATTCATGGCTTCATAAAACC
GTTGGCGGCTGGAACTGGGTGGCAAACCCCTCCCACGTCGGCCTAACCAGGATTAAACCC
TAGCTAGCTAGCTAGCGAGCGACCTTTCCCCATGCCGCCCTCTTCGTCCTCCTCCTCCTC
CGCCGCCGCC