Contig Data
morexGenes
Links



Map Locations of contig_157059 (5116 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_157059

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15401 1 326 bp MLOC_15401.1 Available Available None
MLOC_15402 2 2697 bp MLOC_15402.1 Available Available LOC_Os12g41800.1, FRAME:-3, EVALUE:4e-177, 13112.m04371 protein VTC2, putative, expressed





CDS Structure of MLOC_15401






CDS Structure of MLOC_15402






Contig Sequence (5116 bp)

>contig_157059 5116 assembly3_WGSMorex_rbca.fasta
TTCTTTGCTTGGGTGTTAATTATTCCTGGAGACATGGAGGTCCACAAGGTCAGGATGGCA
AGCTTGTGCTTATTTCTGCTCATGGCATTCCTCTTGCTTCCTGGTAATTAAGCCTTGCCT
GGAATAACTGTCTGAATAATATAGTAGTTTCTCAGTGTTTTGTTTTCTCATGTTGTTTTT
ATGCACAATGTTGCCCATATTTTGCTGCAGCATCTGCAGGCCCGTGCAGGGAGTTAAGCC
AGACGTACCCTACTCGGCAATGCAAGGGTGACCAATGCACAAAGCACTGCGAGCATGAGG
GCTTCGGGTATGGGGAGTGTGACACGGACCATGAATATCCTGAACTTGTTTACTGCGTCT
GCTTCATGCCATGCTGATTTTGCTTCAAGTTGCTCCGGGATGTGAAGCAACGGGCAATAA
GATCTTGAGGCGAGCCTTCTGTAACGTCCAAATAGTTCAAGATTTGGAATGCTAAATAAA
ATTAGCCAATCAATAAATACAGTTGATTGCCCTTGTTCGTCGTTGTATTTTTGAAGGTAT
TGAAACTTATTACGGGCTTGTTTAAGTTTGTTCCTAACCTTATTTGAAATATTCTTCAAG
AACGAACTAGCATCATTATCAAAAAATATAAATATTGCTCGGTAATATTTCATAAAAATC
CAAGTTATTTAAGCTGAATTGTGTTTGGACTCAATTGCAATGATTTATTTCGGCCTCATT
TGCATCTTAAATTTCTCATTTAGTTTATTGAGAATTAATAAACCCTCAAAACAGTTTTAG
TGGTTTATTAAAGGCCCACTTGAATTTTTGGAGAAAAATAAATGAATGTACAAAATCAAA
TCTTGCAAGGAAGTTAAGTCGTGGCAAATAAACTTTGGGAATGAAACCAGAATCTAGCCC
AATTCATCAGGATCTAAATGTAACTTAGACAGCATAGGAAATAGTTACACACGAGAAACT
AGCTTACTGTCCAAACTGACATGAAATGAAAACCGGCTGCAACCATATACAGTACAATTT
TCTGTGTTTCCCTTCCATCATCAGTGGCTGCCTAGTCTCTGCAACAAGCCCTGCTAAATC
TGATGCTGCCTCAAGATGTTGTGACCGAACCAAATCAAATCATCTGCTATATCACAGGTT
CAGTTCTGAAGTAATTCAATGTCTCACAGAAATGCTGCAAAGTTGTTTCTGTAAACTGCA
AATGTAGTAGCTGAAATATCATTGCACAATCCTTGCAATGTTCAGAAATTGATTCATGAG
GAGAACAGCAAGCTTTATTCATCAACCCGGATGTCTTCAGACATACTGTATGTTTCATAG
TATTTAGGCATAAACCACCAAACACAGGGAATGGAGGAGCACGATACACGACGTCTATAG
TTGCAGTTACATTGTGGGTTATTTTACATAATGAACCGACACACGAACTGTTGATGGTTG
CATACAGCGTAGGCTTAGGTAACAAGGTCATCAGCTATAGCGCAACAGAGTTTTTTCAGG
TCTTCAAAGTCACCATCTTGGAACGAGAACGAAGCCATCCTATTGGAAATTCCAGTCTCA
GAAGCTTGCTCGAAATCAACTTTGGTGTGATAAACAAAGTAGCCACAGCACTCCCAGGCA
GAAAGATAGCAGCCAGTGACCAGATTTTTCACCTAAAATCAAACACCAGAGATTTAAACC
TATCAGTTACTTGGTTGATAAAACATTTGTTTAGAGATGGAACACAATGTATTAGCGAGT
TTCACCTGGGGGAATAAGAAAGCATTTCTTCCATTGTTGGATATCATTAGGCTGTGTGCA
GTATTGTTCTCATGCAAAGCTAAGCATGCTGCACTGACTACATCGATAAGTGCGTTTACA
TTGTTGCTGGTGAACACAATAGCTTTTAGAGGGTAATCAACTATTTCAGACACACAAATG
CCTGATCTGGTTGTCCCATCGTATAATGCAACAGTTGAGGCAGACTCCACTGGTAAAGGA
TTAGCAAAGTAGCAGGCCTGTAATATTTGGCAAAAATAACACCATGAGATTCTCCTTAAG
CATCCACTGCAAATTGGAAATTCTAGTATCTAGCAATATCCTATTATGGAAAAAAATTCT
ACTCACTTATTTTGGTTCATTAATAATAGAACAATAAAACAATTGCACGGATCAAATCTT
CCCTTTAAAATCTTACTCATCGTGGTGTGTTAAAGTAAAAGGTTAGAAGCAATTAAAGTG
CTTTGAAGTATGCTGTAAGCCAGTGACAATGCATTACAGCATTAAGTGCATGCTTGTAGT
TGAATGCTTAGTGAAGATCAGACCACCAGACAATTCAATGATTACTCCCATAATATTGGG
TAGACAGGTCTGTATAGCAGATGGCAGGTGAATAGTAATGTACTTCGAGTAAGTTCAAAA
CATTAAGCACTAGAACTAGACAGTATTACCTGAAAAAACATGTGCTTTGGCACAATAGAT
GTACCATCATCAAAGAAAACCCGGAACGCTGCACTGTTTACTTCAGAGGCAATCTTTGTA
ATCAGCCCAAACATCCTTTTATCCCAAAAGGAAGATAGCTGATTAGTTGCATTTGGGACC
AAGAAAATGTGACCATATTCAACAGGATATGCCTTCAGGAAAAGATGTCCATCAGAAATG
GAAAACATGATGCAGATGGCAACTAGCACGTGTATCTATATTCACATTCAGAGGGTTGGG
GAGGGGTTAGGGGTTAAGGTGCGTACATTCGCAATCAGCAGTACTCCATTGTTTGGGGGT
GTAGTCGAAGGAACAACCTCCGGTTCACTATTTTCTCCTTCTGCGATGCACAAAAGTAAT
TCCTCATAGCTTCTACCAGAATTTGGCTTCAAGCATCCAAAAGGAAGGCCGAACTTGTCA
TATTTCTTGAGGGAAAATGAATTCCATTTATCATTCATCTGAATAACAAAATCCCTTTGA
CCTTCAATCACCTGTACAACCATTCAAAACCAATTATTCCAGTCAAGCTCAGGGCAATAT
CATTAACAGGATTGATGGCTTAATAAGCTTTTGAAAAGGAAATACATAAGTTTAACAGAT
TGTCAATGGTATGTCTGGCAGAAAAGAAAAATGATGGTTGGTTGCTTACACTTCTAGAAT
CCCAACATTTCTTTAAAGTTAAACTTCTGCCACCTAAGATGGAATAGTTATGTGCTTTAA
GATGTGGATAACTATAAGTGGCAGCCACTACTGTTTATTGAGTCTTTCCCATTCCGTTCT
CTCTTATTTCCCACTGCTATGTTTCCTAACATCCCCATCCATACTATCCCCCCATAGCCA
TCACGACTGGCAGCACAGGAAAGTCAGGCTGTTCCAATGAGGGCAGCGACAGTGGGAATG
TGAACAATTTGATAGGCGGTGTTGCAGGAATATTTGGTATTAGCATGCCACTCTGCAGTT
TGATTGTGGAAACTGAGGAAGGGAAGAGGTTAAGTATAACATGCACAAGCAAATGTTTAA
AGTTACTTTTATCTACAACGCAAGAATTAGGGGGGGATCCAGGAAGCACCTTAAGTTCGC
AAGTAGTAACATCGTATCCCAACTGGCCCTTCTGAGCAAAGTTCTCCCACTGTTACAAAG
AAAATCATCTATTAAAAATGGTGCCATGATAACTCATAAAGATTGTGTGAACTCTCAGGT
AATACAAACCTGAGAAAGAATGATTGTATCAAGTAAACTTGGGCTGCCTTGACCAGCACA
TGCAAAGCTTTTGAGGGCATCATGTTCACACTGTTCTATACCAAGACGGTAAAGATGTAT
CTTCACACCTGAAGATCAAAGAGAAATGTATGAAAATTGCAATGCCACAATAATATATAA
CTGAACATGTGCTGTTATTTTAAAAGGGTTAACGGTAAGTACACAGCTAGGTTTTGTAAA
AAAAAAATGTGCTTGTGTAAAATTATCTAGGGATATTTCAGTATTCCAAACTGCAATTGT
AGCATCAATCAGGAGCATATCATGAATTCAACTATAGCATAACTATCTAACTTGGCAGAG
AGTTCAAATATGTGGAAAAACAAACGGATAAGTTTACATACACCTGCTCTTCCTTTTTGC
TATTGTTTTTGGTGCCAGAAAATAGTAGAGGATAACTAAATACTTAGACAAGAAATAATA
CTACTAATTTTATTTTATTTTGGTGCAAGAACAATGTTTTAGACAGGCAAAAGAAGAAAT
TCATGATTATAGGATTAAAGAATATTATAAAGTCATTCCTAAATGAAAGAATTGGAAGTT
CAAAGCACTTTTGTTTACCTTCAGGTTGATCCAGAGGAGAGTTCTTGCTGTCAAAAGAAT
ATCCACCTTCTAGTTTGGTGGCCGACACCATACTTACAATTCTTATTATATAGACTACGA
ACTCAACTAACTACAAAGCTAAAAGCCTACTTCAGACTTGTGCAGCAGCACCACCACCAG
CAAGGTAGGTGAGGTCAGAAGGATGCCCCCCTGCAGATGGGAGGGCACCACGGCCACCGT
GGAAAGAAGGCGATGCGAGCAGAAACTTAGGAAAGCGATGGACACATTGTCTTCCCCTTC
TTGGTGTGACGCGGGTTCCTTTCCTTAGAGCCGTGGCTGATCTTCTGAAGCCAGCCCTGC
CGGACCAGCTACCCAATTTTGCAGGATCAACTTGGTTCTTCTTCTAGGAGCTCCCCACAC
GTTCTTGGATCATAAAATCTAGTGTGTTTTGCAGGTCAATCTGAACATGAACAAAGCGTC
AGCTGATCGAAACAGTAACCCTGGCCCTGTAAAAAGAAAATAATCTGAAACTGCAGGCAT
TCATGCAAGCACATAATGTTCGGTCAAACGCCACAAAAGGATCTATGCCGGACCATGCTC
CTACTTCCGAGCAAGCTAGACAATGCATTTCTTTTTCTTCTCATGTAAAGGTTCAGAAAT
CACGGCAGCATGCCGCCCGTGTCCACATATCTTCAGTGCCAACGAAAACATCAGCGGAAC
CTATTTGCTCCGTGAGGAAATAATCGGGGGCCTTCAACGCGAATCATCTAACCTAGAAAC
TGCATCATGGTACCAGATTGCTGCACACCCTACAGGCATACACAAAATAATTGAAGGAAC
ACCCCTCCCCCCCCCC