Contig Data
morexGenes
Links



Map Locations of contig_1570582 (4066 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1570582

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15396 7 3673 bp AK363190 Available Available None





CDS Structure of MLOC_15396






Contig Sequence (4066 bp)

>contig_1570582 4066 assembly3_WGSMorex_rbca.fasta
ATCAGAAATTCAGAATTGAGCTAGCACTGCACAATCTCTGGGGTTGTTGATGTCTGCGGT
TCAAATCCTGATCTCTTGTCTGACAGATCTAGCGCATTGGATGTGGAGTCAGAGAGGATA
GTTCAGGAGGCACTGAATAGGGTCATGGTGGACAGAACGACACTTGTGGTTGTTCATCGT
CTAACTACTGTCAGGAATACTTATTGCATATCAGTTGTTCAATAAGGAAAGATAGTTTAA
CAAGGTCAAGATTCCATTCTCATCACTCATCTTTTATAATCACTTCTTTGGCATATTTTG
ACTAAGATGATCAAATTTCAACACATATGAATGTTTCGTATAGGTCCCCACGATGAATTG
GTAGTAAACCCAGATGGTGCATACTCTCAACTAATTAGACTTCAAGAAAGCAATGAAGAA
GAGCAGAAAGTAGACCATCGAAGATTGGATCCAAGGTCTAAAAGTACAAGCTTATCATTT
AAGCGATCGATTAGCAGAGGTTCTGCAGGGAATAGTAGTAGGCATTCTTTCAACCACTCC
TTCGGGCTTCCTGGCACGGTTGAATTGCCTGAAGGAAATGATACACATGGGGAGAATCAT
ACAGAGCAGGATGGTGAGGTTCCAAAGAAAGCTCCTATGGGACGGCTGGCACTTCTTAAT
AAACCAGAGTTACTTATTATTCTGTTAGGAGCCCTAGCTTCAGCAGTTCACGGAGTGCTT
TTCCCAATGTTTGGTGTGATGATTTCCAGTGCAATTAAAACTTTCTATGAGCCACCAGAT
AAACTCAGAAAGGATTCTAGCTTTTGGGGGTTGATGTGTGTGGTGCTGGGTATCATTTCG
ATAATCTCAATACCCGCAGAACTCTTCTTGTTTGGAATAGCCGGAGGGAAGCTTATAGAG
CGTATCCGTGCTATGTCATTTAGAAGCATTGTGCATCAAGAAGTCGCTTGGTTTGATGAT
CCTAAAAATTCCAGGTTTGTTACAAATTTTCGCTTGGTCGCTTCTTCCTTTAGATTCTGT
GAGCTTTACTTTTTGGTGCTAACTGCCAAATTATATCTTTACAGCGGAGCACTTGGTGCA
AGACTGTCAGTTGATGCTTTGAATGTACGGCGTTTAGTGGGAGATAACTTGGCTTTAATG
GTTCAGATTGTCTCTACACTTATCACAGGGTTTGTCATTGCTATGATAGCTGACTGGAAG
CTCTCTTTGATCATCCTCTGCGTGATTCCATTAGTGGGCCTTCAAGGTTATGCCCAAGTG
AAGTTCTTGAAGGGTTTCAGTCAAGATGCTAAGGTAACCCATCAAAAGAAGCCATTAGGC
TGTTTTTCTAGCGATGTGATGTTTTGCAAATAATTACTAAAACTAAATGATATTCTCTGC
ATTTCCATATAAGTTGTTGCTTATGACAGAAGCTTCTTGTCATATACTCCCTCTGTAAAC
TTTTATAAGAGGTTTTAGGTCACTTCTTTAGTGACCTAAAACGTCTTACATTAGTTTACA
GAGGGAGTATTTCATTAGCGAGTCTTCTGTTAGAACCACTAAATTATTGTAACATATATT
TAAAAGTTGCAACAAAAATTCTGCCTCTGTGCAAAACAACACATTTGGGAAACTGGAGGG
AGTAATTAGTAGAGCATTCAATTTCTAACTGTGAAGCTAGAACTATAAGCTAAATACATG
TGCTTTGCCACTGATAGAAAAAACTGTTCACGTTAAGCCATTCATCGTCTCAGTCTGCCT
CAAGTCTCCCCTATGCCTTCATGCTCATCCGACTTCTGCTTTGGGCGGAGTCATGCCTCC
ACATTCTTGCTTGGTTTAAAACCTTACTCTGTGCCCTTGGCTCCACAGTGACGCCAAGTC
GTACTTTCTTTTTGAGCCGTGCCATGCTCCATTTGTGTCTGAGAATTTTTAGAAGGTGGT
CAACTTAGTTCATTGAGGTCGATGTGTTCAGTTAGGTAGCTTGTTTTTTTTCCTTATAGT
TAGCGAGCTGGGAAAGTGAGGCGGGAAACATGGGTGTGAACAACCATTACAAACTCTCAT
TTATGTAACAGTAAGTTAAGATAACAACTATTCAGTCAAGGGTATTAAGTGAAGTAATTT
TAAAAAAATCATCGAGTAATAAGAATCTGTGTTTACTCTAGATAATTTTTTTCACACTTT
GAATCTTTTTATGTCAATGATAATGAATTGCTGGTTCTCCAGATGATGTATGAAGACGCA
AGTCAAGTGGCCACTGATGCAATTAGTAGTATTAGGACCGTAGCTTCGTTTTGTTCTGAG
AAAAGAATTACAAGAATATATGATCAGAAATGTGAGGCCTCAAGGAATCAAGGAGTCAGA
ACAGGAATAGTTGGAGGCATTGGATTTGGTTTCTCATTCTTGATGTTGTACCTTACGTAC
GGTCTTTGTTTCTATGTTGGAGCACAATTTGTGCGCCATGGCCAATCAAATTTTGGTGAC
GTTTTCAAGGTATGTAAATGCATTATTTCAGAAGTAATAACTATTTCTTCTTCAAAAGAA
TTCTTCTTCATATTAAGATTTTTCAGTCTTAATTCCTCCATCCTTAACCAGTCACTACTT
TCACGAGGTGATTTCACATAGTAAGTCATACATTGCAGGTTTTCTTTGCACTGGTTTTAG
CAACCATTGGAGTATCTCAAACAAGTGCAATGGCCACCGATTCAACAAAAGCAAAAGATT
CAGCTATTTCCATATTTGCTTTATTGGACCGAAAGTCTGAAATAGACTCAAGCCGCAATG
AGGGTTTGACATTAGACGAGGTCAAGGGCAACATCGATTTCCAGCATGTCAGCTTCAAGT
ACCCAACTCGCCCAGATATTCAGATCTTCACTGACTTTACCCTGCACATTCCCTCTGGAA
AGGTTCGCCTACTTTTTTCTATTCAAATCACTATTGTTATATCTTCTACAGTGATGTACA
TGTCAGCTTACTTTCATTGTGGTCTTATATAGACTGTTGCCCTTGTTGGAGAGAGTGGTA
GCGGCAAGTCAACGGTAATTGGACTGTTGGAGCGATTCTACAATCCCGATTCAGGCACCA
TCTCATTGGATGGAGTGGAAATCAAGAGCTTAAACATTAACTGGTTGAGGGACCAAACAG
GACTTGTGAGCCAAGAGCCTGTACTCTTCAATGATACAATCCGTGCCAACATAGCCTATG
GTAAGGATGGGGAACTTACTGAGGAGGAGCTCATTGCAGCTGCAAAGGCATCCAATGCAC
ATGAGTTCATATCAAGCCTTCCCCAAGGATATGACACCACGGTTGGGGAGAGGGGGATAC
AGCTGTCCGGTGGCCAGAAGCAGCGGGTGGCAATTGCAAGGGCCATACTGAAGGACCCTA
AGATACTACTACTTGATGAGGCGACTAGCGCCTTGGATGCTGAGTCCGAGCGGATTGTGC
AGGATGCGTTAGACCATGTGATGGTCGGCAGGACCACGGTTGTTGTGGCTCACCGCCTCT
CGACGATCAAAGGTGCTGATATCATTGCGGTTCTTAAGGAAGGCACAATAGTTGAGAAAG
GAAGACACGAGGTGCTGATGAACATTAAAGATGGGGTGTACGCTTCACTAGTAGAACTTC
GTTCAGCGTCATCATAATACCTAGGATCAGTTTTGGCTCATATCTCTACGCACATTGTAC
ATCTTCCCTGACCACCTTTTCTTGTTATTGCTGTTGTTGCTATAACTGCGCTACATTATT
CTTTGGGACTTGAAGAGGAATCCAAAACTAGAATGAAATTTCTTGTGTCTGTGTAGCGTA
AGATTGTAATCATTTTATTAGGAAATCTTGTGCTTCTGGTTTTGATTCTGATTTTGAAAT
GTAAAATTCCCCACGTCGATGTGTAAATGAGTGTAATGTTCTGCTGTACATAATGCCTAA
CATAAATATTTGAAGACCGTTGTAAAATGTGGGCATATCATGTATTCCCTCCGTTCCTAA
ATATAAGTCTTTTTATAGATTCCACTAGAGATTACATACGGAGCAAAATTAGTACTCCCT
CCGTCCCANNNNNNNNNNNTTAGATTTGTCTAGATATGAATGTATC