Contig Data
morexGenes
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Map Locations of contig_157056 (4629 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_157056

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15383 1 2713 bp MLOC_15383.1 Available Available LOC_Os07g46480.1, FRAME:+2, EVALUE:0.0, 13107.m04905 protein eukaryotic aspartyl protease domain containing protein, expressed





CDS Structure of MLOC_15383






Contig Sequence (4629 bp)

>contig_157056 4629 assembly3_WGSMorex_rbca.fasta
AGGCAACCATTAGTCCATAGTAATTGTCNNNNNNNNNNNNNNNNNNNNNTGGAGATATAT
GCTCTAACACCTTGCCGTCGGGGACGAGGGGAGATGGAGGAAGAAGGGGGAGGAGAGGTG
GCAGTTAGCGTTTTCCGTGTCTCTCGCGGGAGCAACGCGCGCGGGGGCGGGAGGGGGGGG
AGGCACCAATCTCTCGCTCACCAAAGCTCCAACACCACATGCCCACCGTGATGTCATGTA
TATCGAGCACAAAGGAAGCATAAGCGGGATCAAACTCTTCAGAACAAAGTCATGGGCCTG
GTTTTAATATTTTTTACTTATGTGCATGTATTTACTACTATTACATTATTATTATTAGAG
CATCTACAACCGAATTTCTTATATCCATCTCAAACACGTGGACAGACTATGACGAATCAC
AAAATTGCGATCCAACCAAGTCTCCTCATACCCGCCTCAGACGCCCGGACTGATCGGTAC
CCCTCATATCCATCTCAAATATGAGAACGATATAAGGGCTCGTGGACGCACCCGAGCACA
TCCGATCAGTCCACGACGTAGGGTACGACCCCACCCCGACCACCTTTTCTCTTTCTTTAC
TCATTCTTTTGTTTTTCTCTCTTATTCTCCATCAATTACGTGCAAGTGACCGGACATATA
TGAAAAATGCGGCTGCATGGACAAAAAGTAAGGACTCAAAATAAATACGTTCGGTCATTG
ACGGGACGTAACTACAGGTGTATAGAAGTCATATTTGCTAAATTCCGATGTAGATGCTTT
TAGATCCAAAGAATCTTTTATGCAAACACAGAGCACGTGTTCCAAGACTGGTAGTGTGCT
CTAGCCCCAAAGCTTTCCATGCCAAGTTATGCGTTATTAACCCTTCGTTTTTAAATATAA
GTCTTTCTAGTGGTTCAACTAACAAACTATATACGGATGTATATAGNNNNNNNNTAGAGT
ATAGATTCATTTATTTTGCTGTGTATGTAGACACCTAGTGAAATATCTTAAAAGACATAT
ATTTAGGTAGGGGGAGTAAAAATTACTTACTATTCTCCGGTCGTTTGAAAAAAGAGCACG
GGCCCGTTAGCAAGCATGGACCACGGGTAAACGCAACCAACTTCTTTCTCCAAATTTAGC
ATTGCGTGTGCCCGCTGGCTAGCATGCACTGTCCTCGACAAGCCGATCGTAAGCTACACC
AACCAAGCTGTGCCGACCAACCTCCGGTCGAACATGGTCCTGAGAAGAAACACTACATTC
CGATCCAAGGGAATTATTAGGAATTTAGCGTCTAGGAGTCTAGCTTGTGTCATGAATTGC
TGTTATGTCATCGCGTGGGCGTGCATCCATTCATGCCATTGCCATTGCCAGCTCTCCCCA
TTCTCCGGTGGTCACTCGATCGATCCGTCGTTCGATTCGATCTGGTGGTGGTGCGCACAT
TGAGGACCATGGCGTGCATACATTTACACGCTATGGGACACGACGGGCGCCTGGCGATGC
CCGGAACAACCACAAGCGGACATGCATGGCGCGCCGGAGCCCCGAGCCCAACAACACGAT
GGAGCTCGGGAGTCACAGCTCAGACATTCCCTCTCGTCACATGCTCTTGCCTCGTCGGTG
ACGCCGGTGAACTCGCGGCCTCCTTGGTGAACTCTCGTGAGCCGTGAGCCGTGACAGCAA
GCGAATCCACCAGTCCTGTCGCCAACGAACGCTGTTTTACCGCGCGCGCAATCCCACTCG
CTCGGCATCTCCTTGGTACGGAAGAGGATATCACGTGTGCGTGCGCGGCCTCCAAAGCGC
AAATCATCTCGTAAACCGGGTCCAAGAGCTCATGCCGACGCGCACCGACGCGCACTGGCC
AGCGCCATCGTCTCCCTCGGATATTCGAGGTTCTCGGTCCATGTCCATGCGGGCCGTACG
TCGCCCCCGTGGGCACCGCCATGCACAGACAAGCCTCCCCTGCGACGAGCAGGCAAAGAC
GCAGACCTCGTCGGCAGTGGGCGCGCACGGAATTCAACGCGCCTGGCGCGCGTGGGCCGC
GCCCATTGGCCCGGGGCCGCAGCGCAGAGTGAGATCACGAGCTGCCGCAGGCGCACGCTG
CAGTGTCGTGCTAGGTCCAGGCGGGCCAGCATAGCCATCCGCGAATACGTCCATGGAGGA
TCCTCACGGGCGCGCCATTGGCCACGGCACGGGCGCTGGCCGTGTAGTGTAGCTTCCCGC
GCCTCGCTGCCCGCTCGGACTATATATCCACCGTGTCGGTGCTACACGCTCTGCACCTCA
CCGCCACGCTTCAAGTCTACTCCAGTAACTTGGTACAGCGAAAATGGTGAGTCGGTTCCT
CCGCGGAGTTGCTCTCTCGGTGTTGGTGGTCGCGGCGCTCGCTGCCGGCGCGGCGACGGC
AGCGGCCTCGCAGCAGTCTTGCCCGGCTACGCCGCCGGACGCGGGGGCGACGCTCCAAGT
GTCGCACGCGTTCGGACCATGCTCCCCGCTGGGAAACGCGGCCGCAGCGCCGTCGTGGGC
GGGGTTCCTCGCGGACCAGTCCTCCCGGGACGCGTCGCGGCTGCTGTACCTCGACTCCCT
CGCCGTGGCGGGGCGCGCGTACGCGCCGATCGCGTCCGGGCGGCAGCTGCTCCAGACGCC
GACGTACGTGGTGCGCGCGCGCCTCGGCACCCCGCCGCAGCAGCTCCTCCTCGCGGTCGA
CACCAGCAACGACGCCGCGTGGATCCCCTGCTCCGGCTGCGCGGGCTGCCCCACCACCAC
CCCCTTCAACCCGGCCGCGTCCAAGTCGTACCGCGCCGTGCCGTGCGGATCGCCGGCGTG
CTCGCGGGCGCCGAACCCGTCCTGCTCGCTCAACACCAAGTCCTGCGGCTTCAGCCTCAC
CTACGCCGACTCCTCGCTGGAGGCCGCGCTGTCCCAGGACTCCCTCGCCGTCGCCAACGA
CGTCGTGAAGAGCTACACCTTCGGGTGTCTCCAGAAGGCCACCGGCACGGCGACGCCGCC
GCAGGGCCTCCTCGGGCTCGGCCGCGGGCCGCTGTCGTTCCTGTCCCAGACCAAGGACAT
GTACGAGGGCACCTTCTCCTACTGCCTCCCGAGCTTCAAGTCCCTCAACTTCTCCGGCAC
GCTCAGGCTCGGCCGCAAGGGCCAGCCGCTGCGCATCAAGACGACGCCGCTGCTCGTCAA
CCCGCACCGGTCCTCGCTCTACTACGTGGGCATGACAGGCATCCGCGTGGGCAAGAAGGT
GGTGCCGATCCCGCCCGCCGCGCTGGCGTTCGACCCGGCGACGGGCGCAGGCACGGTGCT
CGATTCCGGCACGATGTTCACCAGGCTTGTGGCGCCGGCGTACGTGGCGGTGCGCGACGA
GGTCCGCCGCCGCATCCGCGGCGCCCCGCTCTCCTCCCTCGGCGGGTTCGACACGTGCTA
CAACACGACGGTGAAGTGGCCGCCGGTCACGTTCATGTTCACCGGCATGCAGGTGACGCT
GCCCGCGGACAATCTGGTGATCCACAGCACGTACGGCACCACCAGCTGCCTGGCGATGGC
GGCGGCCCCCGACGGCGTGAACACGGTGCTCAACGTCATCGCCAGCATGCAGCAGCAGAA
CCACCGCATCCTGTTCGACGTGCCCAACGGACGCGTCGGCTTCGCCCGCGAGCAGTGCAC
CGCGGCTTGATTACCCCGCTGCCGGTAGCTGGGAACCGAGGCCGGACCAGCCTCTGCGGC
CTGCGCCACTGTTGCCTGTCCGTTGGTGCCGGACCTGCATGCTGGTGATTTAATTATTTT
GTAGCCTAGTGAGCGACTGAGCGTGTTGTCTCCATCGATGTGCAAGATCTTGTGTCTTTC
TTTCTTGTTTCTGTAATATCATTTGTGTGTCATGGGTTTCTAGTAATTTCCTGCTTTTAA
GGTTGGGCTTGTTAGGGTTTAAGAGGGGGTAGTGTATTTGCATCTACCCTGCGTCGTAAT
TAATTGGTTGCTCAATAACGCTATGCTTGAGAAAGTGTATGATGCTTCCAGGACAATGTT
TTATCTTATTTTACAACCGCAAAGACTGCCCTGAATGTACTTCTTTTTCGAATTGAAGAG
CATAGCTCCGAATTTCATTCATCAAAAAAGCTAATGAGATAAATTCATCGGAGGTCACTG
GACTCTTCCCCAGATTTCACTATGGTCACTGGACTCTTCCCCAGATTTCACTATCGTCAC
TGGACTTGGGACCGAAACAGAGTCATGAAAGTCACATCAGTGAACACCTACCGTCACCGC
GTACGGTTTAGTAATTAGCTTTGTATACTGCCTACATGGCATATTGTTGACCGATTGCCA
TCCATGTATGTACCATCAGAGGCGTGAAACTCATCTGAAGCTCATGTATGTACCCGCGAA
TTAAAAAAAAAGACATGAAGCTCATCGACAGTCAATGGACTTGTTCTCAAATTTCACTTT
GATCATCATATTTAAGAATAAATAAAGACAATTGCATGCAAGTTTGTTTTTGCAAAAATA
TTGTGTATTACATAATCCCGTGCAAACTCCCCTTCCGCATATCCCTAGCCCCCCCCCCCC
CCATCCCCTCCTCATCACCCCCCCCCCCTCCATCCCCTCCCCCCCCCCCCCCCTCATCGT
CTCTTCATA