| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_157044
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_15337 |
5 |
2207 bp |
MLOC_15337.5 |
Available |
Available |
LOC_Os11g18947.2, FRAME:+2, EVALUE:2e-105, 13111.m01914 protein zinc finger, C3HC4 type domain containing protein, expressed |
| MLOC_15338 |
2 |
1103 bp |
MLOC_15338.1 |
Available |
Available |
LOC_Os02g57560.1, FRAME:+2, EVALUE:3e-62, 13102.m06649 protein tyrosine protein kinase domain containing protein, putative, expressed |
CDS Structure of MLOC_15337
CDS Structure of MLOC_15338
Contig Sequence (8941 bp)
>contig_157044 8941 assembly3_WGSMorex_rbca.fasta
TATATATATATATATAACGGATCATTTTTTAGGCTTGATGAGACAAATTGTGCTAAGAAA
TTATTTGTTGTCTTCTTTAACAAGTCTTTTTTTATGATCTCTTTCTCTTCCGTATTATCA
ATTATTCCATGTGGCATTTTAAAGATAAAACCATGTACATGGACATGCCCTTACTAGAAC
CACCAAAGGTAGGAGTAGCACAAAACAGCTTACCTAACCACACACGCCACCATCGTTGTC
AAGTCAAGGCGACAGCCACGTCGACGGCCCCGTTAGCATCACAAAGTCCAACCCATCCCA
GCCAACCAGCCCCTACTCCCTCTCCGGCGACTGCCCTCCCGCACCTCCCCTGGGCCCGCC
GTCAGCGACGCGCCCAGGCCCACGTGGCATCCCGATCATCCATCTCCCAGCCCATTTCCC
CCCTCTCCAGAAAACAACCGAAAAAGTAGAAAAGAAAAGCCAGCGCGTGACGTCAGAAAG
CGAGGCGCCAGTGCGGGAGGATCTTATCGGTGTCAGCTACCACCCGTCCCATGCCCCTGC
CGTGCGGGCCCGTGTGGCCACGCGGGCCCACGAACAGTGAGAGGGCGGTAGGTTTGACTG
GGTGAGCAGGCATCGCTCCTCGGTCCTCGTCTCCACTCACAGACTCAGGCGGGGCAGTCT
TGCAGAAAAGCCCCTCCGGATCCCGCAAACCTCCGCGCACCACCCCCGCTCTCCCTCCAC
ACAGGAGAGGAGAGGAGAGGAGCACCAGAGCCGGGGAGCGAGCGAGCGAGCTCGGTCCCG
CCGGGCGGAGAACCCCCACCCCCACCCCGCCCCAGCAGCCAGCGCCGGAGCGCCTCCCGC
CGCCGGTAATCGGTCTCCGGCTCGACTCCGCGCTCGTGCTTCGGCCGTCGATTTCCCTTC
CCTTTTCCCCGGCATGATTTCTGTTTTCTCGCTCGATTTTCCCCCAGGTCCGCTCGAATT
CCAGGGTCCGCCGTCTGCGCAGGGGAAGAGGAAGGAAGGAGGAAGCGGGGGGAGCGTCGG
GGCCTTTGGTCGGCTTACTCCGTCGCTACGGTCCGAGGCCGTCGCGTCAGCTTCGCTTGC
TCGGGCTGCTGGAGGTTCGTCTCCTTGTTCCGCGAGCCCGGATACCTCTCTGTTCCTCTT
GCGGGCAGCTCCGATCCGTCTCGCCGCCCGCGGATTCGGCAATCCGGCTGTGGTTTTAGA
ATTTAGAGTAGAGTAGCGGCATAGCTTGCTCCACGCAAAAAGGGGAAGGGGGCAAGGGGG
GTTGCAGCTGGCTCACGCCGTCGGCCCAGCGTGAACTGCGTCGGCGTAGCTCCGATCGGA
ATTTAACTGTGTGGTGACGCCTGGCTGCTTCTGTGGGGTGTGGGCGCAATCCAGCACTTG
CTTGCACGCTTTGCGCTGGGGGGTTTGGAGTTTGGACACACTATCCATGTCTTGCTGGTG
CTGTAGGCATGCTGTGGCCTTGCCCATGCTTTTCTCGCTTATGAGTTGAAGTGAGGGCTA
CATGGGGAGTGCACTTGTGTTGTGTGCAAGCCTTGTCTGCAGGGGATAAGGCTGCATCGG
TAGGTAGCTCCGTGCTCGATTGGTCGATTTGCTATCGGCTAAGAGCTCCGGTGGCACTGC
CGACGCCCATTTTCTGTGCTAGAATGTGAAATTATGGAGTATGGTGCATGGTTTAGCATG
GCTTGTAGTATGAAGGTATGGTGGTCATGTCCACAAATGATGTATCATTCCTGTCGTTGT
TGAGATCAGCTCTGTTAGAGTAAACCAGAGAATAATAAGGTACCTGCAGAGTTGTATGGT
TGCGTGCCGGTGCATTTTGCCTTATCTTGTGCTAATATGCTATATTTCTAGTTCAGTTCA
TGATTCCCTGTTCTTTCTTATATCAGCATGGTCTTATTTCTTTGTAGGGTATGAGAGACG
AAAACAACAGCTAGAGGATAGCTCAGATTAAGCCCTTTCATTAAGGATAGAATGGGTGGC
TGCTGTTGTTTTTCATCAAGAGCGGAAGCGGACAGAGCACCGGTTCATATCTATGTATGT
AGGCCCTGTTTTATGCTCTTTGAATTTACAGTATTCTCTGATTTGTGTGCCACTGTCAAC
TATGGAATGACCTGACATTAGCATCAGGATGGTCTCTACCCTCTGGCTTACATTTGTTTT
ATAGGAAGATCAAATCAGATTATCCACAATCACGATACTCATATATTTATATTTAAGTTG
TTGTATGTAATACGCTATGCTCATTTGTTGATCTGGCATGTGCCGTTGTTCCAGAATTAG
CTGATGTTTTACTTGCACATGCTTATAATAGCAGAGTGCTACAAGCTTAACTGTGTTCTT
TGCAGTTTTGATGCACATGATAAATTATGTTACCTACGGTGTGCATCTCCCATTTCCCTG
TCTTGGATCCTTGATGATTTGGCATTGTAGAATCTAGTCTCTAAACAATATGCTGCTTTA
CTGTAAACCTGTAATGTTGTGATATGTAGTGTACAGCCTTTTTTGCAAAAATCACCGCCT
CCTATTTTCTTCCAATAATTTGCATAAATTGTCTTGATTAATACTGACTAGGCGGTACCT
CTGTTTTTGTCAACCTTCCATATTATTAGTCACTTGATTTTGCTAAGAGCGTTGGCTTTG
ATTTATCCAGCATCAACAAAATCAAGAAGAGCATGAACCTTTGTCTTCTGCCTTTGATGG
ATCATCTCCGGCTTCTGCTATAGTCGCAGTTGACACAAACCTGGACACATCCACTCCTGA
CACTTATCGGGCGCCCCCTGCACCATTGCCTTATGATGTTAGCTTGCCAGTTACCGAAAA
CCCAGGTAAAGTTCTTATGAACTTTGAGGCTGATTAGAATTAACCAAATACTGGTAGTTA
TGCAAGCTTATAATTCTTTCATGTGCAGATTTGGAGAAGTCAGATATTAAAAGCAAAACA
GATGATCAGCAGGAATCTTTAAAGGTGGATGAATATGAATCATGTGAAAAAGGTGCCCCT
GAAGATAAGACTGAGGAGGAGGATGTTTGCCCAATCTGCCTCGAAGGTCCTCTTTCTCTT
GATCCTGGATAAATAATTCTTTATATTGCCAGGATAAGAACTGAGTACTTCTTGATACTG
TCTTTTACTTGGTTGTGGAATTGGATGAACATGTTTGTGCTACTCTTCCTATAGCCTGCC
GATTTCTTGTTAACAGGGTAAATTGGTCAGGAAATTTATCTTATTTAGTTGAAACACAAC
CATTTGTTATTTCTCTAGTGACGGTAGAGGGATATGTTACAGAATCTGTCAGTCACACAA
GTGCTGGTGCTCCAGTTATTTTTCTGTATTTGGTTCAGATGTATGCATTATTTGTTCATT
TATATAAGATGGATAATTCTGCATTTTTATAAACCTTACTTTATCAGAACCTTAAACAGT
TCACTTGTAGATGAATGCATGCAACCTCACATAGTGGACCTTTTTATTAGAGGAAAGCTG
CATCAATGGATGTTCTAAATCTAAGTTATATGTTGTGCTGGATCATAAAATTCCCTATAA
TAACCTTTCTTTGTCCTCTCACCAGAATATGATGAAGAAAATCCCCGCTCCATTACCAAA
TGTGACCATCATTTCCATCTCTGTTGCATCCTCGAATGGATGGAGAGAAGTGAGACTTGC
CCAGTCTGTGACCAGGTTAGTACAGTAAAACCCAATATAGCTCTCTCGAGGCACTGCCAT
TGAAACACATGGATGCCATTTCTGCTGTCATTTCCTGTATTCTTTATGTTTTTGTTATAC
ATGTTGCATGGAAAGGTATATTTTAATGTATTTATGCTCCATAGTATATTCTGAAAAATG
CCTAGATTGGAACTTACCGATGATGCTGACCAGCATGAATATTTTAATGTATTTATGTTT
TTTTTTTGCTTAATATGGCTGCATGCATCATACCGATGCAGAGGCCGGGGATAAAAGAGA
GGACAGCCTGTGAACATATCTTTGATTCGATCCGTGACGATTTTCTATCGGCTGTCATTT
TCTTCAGAATCCCTTATTCGTGATAATTCTGTATTTGGACAAATTTCTGTATATAAACAT
GGTACCTTCCCTTGACAAAGCTTCTCGTTCTACGTTGCAGATAACTTTGATAGATGAGAT
GTACGAATAGCATGTTGACCCCGGCGGATCCTCTCTAGGAGCTCTTGCGTGCCTACCGAG
GAGGTTTAGTACTAGTCCTTTTTTCTATGGGGGAAGTAAAACCAGCAACTATTCTGCTCC
TAATATGATAGTATGATCTGGTGGAGGTGCTACTGGAATGCATCTTGGGAGAACAAAATG
GGAAATAATGAAAGGAAGGAAACTGGAAGAAATATGCTCTAAAAAAACATCCATCCCTGC
GTTTATACTAGCATTTGTGTCAAGCTGTGGCTGTTTATGGTAACAGGAGGATTAGCAGGC
TGCATCTGCAATATGCACTTCATACTAGTTGAAAACTCTTGAATCTAGCTCTCTTTTTCA
TGCTTTCTGGATTTTGGGTCGCGTTTTCGGATTGAGCGTCTGTATAAACCATCACATACT
AGATATAGGGTGACAGCAAGTATAAAAGAACTGCTTCTGAACTATGTTTTCATTTGTATA
TCCTTACCCCTGAATCTTCTCCCGATTGGCGATCCGAGCTGTCTCTGTTCATCTTATCTT
TCTTGTTGAGTAGTCCATCTCCCGGCGCGGCGCGGTGCATAATTTTATCCACCGCGGGAA
GTTGATGCTGTTGCTCTTGTTGACAAATATGTGTGAGCTCAGCTCTCTGTCCTGTCCGGA
TATTGTGGGTGATATATTTATCATGGTTAGTGTTGCGTGTAATCCCATGAAGGTTGACCT
TTGAACAGGTCTGGTTGTGACAGCGAAGCCACACTTGAGACTTCATCCAGCGGTTTTGGT
ATGAAATGCTGCGCTGCTCTCTTGGGCCACAGGTGGCTGCAGTCCGAGGACATTGACACG
GTCTCTCCTAAGTACATTTACTCGGCAATATCTTCATATAATAGGGTTATGTATATCCAA
GTCAACTGCTATTTTCGTAGTACTTCTGTACCGGAATATTTGTAGTTGTAGTAGGCCGCT
GACGCTTCCGGTCTCCTATTTGTACGTCCACGCATGCACATTTTTCATTTTCTTCTTCCT
ATATCGGTCATTTGCACGTAATTGATGGAGAGAAAGAAAGAAAAAAATAAGAATGAATAA
ATAAAAGAAAATTGTGGTTTGGGATGGGGTCGTATCCTATGTGACGGACTAACCGGGCAC
ATATGAAATCCTCCGCAAGCCATCATATCATTCTCATATTTGAGATAGATAACCCAAACG
TAAAGGGATGATATGGAGGATTCGGTTGAGTCATTTTTTTCTTCTCTCTCCTGTCCGGTT
ACTGACCGAAAGTGTTCGCATATGAGGGGCCATTTGAGGGGCTTGACTGTAAATGTTTTA
ATGTATTTTTCGAGACCAGCTTTGGCGATATGTTAGTGCAAGTCATACATGACATGCAAG
TTACAAAAAGCATTGCCGTCAAATTCTTATGTGAAAGGAGTTTTGAATGCTTTTTTTTTA
CATTATATATCCCATATATTATTAATCTTATCAATAGTTAAATACAGTCTCAAAAATGCA
TTAGGCCATGCCCTGTATATATGATTGTTGGAAATCAAGTCGTGTGGCTTGGTGATTCTT
AAATGAAGGATGTTTATAATCATCACATGTATGGTTAGGGCAACACCAGACCACACGCGT
CCTGATCATAGAGTGGGTCATGTCACCGAATACATGCACAAATAACGAAATTGATGATGT
TAGCAGGCAGTGGCGGAGGCAGGGGGTGCTGGCAGGGGCCTTGGCCTCCCCTATGCTCTC
ACAAATACATCTATATGTACTCTTAATCCTTCATTTTTCAGACAAAATTAGCTAGGTTTA
GATGATTTGGCCCCCTCTAACAGTATATGACATGTTTTGGCCTCCTTTATATTCAGTTTC
TGGCTCCGCCACTGTTAGCGGGTTTCTTTCGTCTTTTCAGTTTTGAAAATGTTTTATTTT
TTAAATAAAAAATCTGACTGAAAAACCATTTTCATCATCAAATCCGTCGCAATGAGATCT
TCGAAACTAGTTCTCGTATCAATATGTTTCGATGACTTTTTTGTTTAAAAGTTGCCATCT
TTATTGCACATAAAGTGACATCATGATTACACCGAAGTTGCCATGATATATTTCAACAAT
TTTTTCTTCTACGTTTAAAGTAAATTTTGACATGTTATAAAAAATTAATTAAGAAACTAA
ATTTGCCATGAAGAATTACTAACATTTTCCATGATGCATGGAATAATTTTAACATTGTTC
ATACGTCAAAAAATTATGTCGTCAATTACTTTAAAAATGCATGGTCAATGATTCAAATTT
GCCATGAACCAAAAACTAAAATTGCCATTGAATTACTTAAATTTGTCATGATACATGCAC
TAATATTTGCCATTGTTCATACAAAAAATATTTTTCATGTTCAAAATACTAGAATTATCA
TGGTTAAAATACAAAAATTGCCATGATCTATAAACTCAATTTGCCATGATGAATTACTAC
AATTTATCTTGATCCATGAATTTAATTTGTCATGTTTAACTACTAAAATTTGCCATGATC
AATTAATAAGAATTCCCATGAAAATTAGTTGAAATACAATGATAGCTTTAAATGTAGAAG
AAAAAACTAGATGAAACATGTCGTGGCAGCCTTACTGTAAACACTGTGGTAACTTAAATG
TAAACATCATGAAATTTTTTGGCAAAAAAAAGTCATCAAAACATATCAATATCTGATCTA
GTTTTGAAGATCTCATCGAGACGGATTTAATGATGAAAACGATTTTTAATTGAAATATTC
ATTTAAGTAATAAAACATTTTTAAGTCCAATAAACCAAAATAAGAAAGAAAAACTGCTGA
TGTCATATGTTTAATATGACAAGATGAATGATTATAAAGACGTGTGAACCATGTTGTCTC
GTGTCACACGTATGAGCTTCATTTGGGTCTGTCTATGGCACATGTTGATGTGGTCATAAA
TATTGCACATCTAAGTGACTCAATCAACATAATAAGAAAAAAGGAAAAAGAAATACTCGC
ATGAATCTTCATATAAAATCAATGATATATTCCCTCCGGCCCGTATTAAGTGACGCGAAG
AGAGAGTTAAGTTGGTATAAAATTATATGTAAATAACGTTAGTTAAATTTGGATAGAGAA
AGTATGATTTAGATATGCAATTACTTAAACTTAAAACACGTCTAAATATGCCTTAGGCCT
AGTTCGGTTAATCCCTTTCCTGCGGTGATCGAAGGGAATATGGAAGAATTTTGGCTTATA
GAGGATTTAATCCTCCTCAATGCCCTTCAAATTCACCTCAACCGAACAAGTCCTTAGGTA
TATGAATCCTCGTCGCTGATCTCGCAAAGGGATGGCGAGTGTGGAAGAATTATCTCCTCT
GCCAATGGGCCTTTGTTTATGCAAAAGGTCGCCAGCGACTGCATGTGGGTCCCGACGTGT
TCCGGCCCACTTGCAGAGGCACACGTTTAATTCCATGGAGAGGGACGCCCGCTTAAATGC
TCGAGCAAGCTGAGCCCTTTGGCAGTAGTTGGTAGAGAACTCTTCCACTCTTTGCTACGG
TTTGCCCGGTCCAGGTCCAGGTCCAGCGCCCTGGATGGCACTGCAGAGTGGGACCGGGCC
CACGTGCAGGGACGCATTGTGTGGTCAGAGGAGGGCCCACGTTCGCTGCACCGCTGCCTA
GCTGGCCGGCCTTCCTTGGACACGGTCGCGCCGCGCCTTGTCCTCTTCTATAAACCGCGC
GTACGTCGACTTCGCCGCCCGGTTCGCTGGCTGGAGTTGTGGCCTGCGGGACATGGACGG
ACGCGACCACCGTAGGAGGCTGTCGGCGTCGTCGTCCGGCCGGCGGGAGCGGCTCGGGCC
GGCGCCCAGCCCCGCGTGGTCGCAGCAGCTCTCCGTTGGCAGCGGCCGGGCCAGGTCGTT
GTTCCGGTCCATCGGCGTCTGGTTCAGCTCCCTGTCCACGCCGTCGTCTCCCACCTCCGC
CAAGAAGAAGCGGCCCAAGCAGCTACCCCCGCCGGCGCTGGACGACGCCATCAAGAAGCC
GCCTTGTAAGCTGCTCGATTTGCCTTTGCCCTGCTTGCTTGCCATCCCGGTCTTCTCGAC
GGCCGGCCGGCCGATCCGCTTGCTTATTAGTTTTCCGGCCCCTTGCTGACCTTGGATGTG
CTGCTTTTACAGCGTTCGGCTACGGCACCGGGCGGGCGTCGATGCTCCGGGGAGCAGGAG
GAGGGCTGTACGGCGGAGCGCGGAGGAGCGGGTCGCAGACGCAGTACGAGTTCCAGAGCT
CCGTGTTCACCATGGAGGAGATCCTCAAGGCGACCAGCAACTTCTCGCCGGCGCTCAAGA
TCGGGCAGGGCGGCTTCGGGGCCGTGTACAAGGGCGTGCTCCCCGACGGCACGGTGGTCG
CCGTCAAGCGCGCCAAGCAGCGGATGCAGAACCCGCACGTGGACGTGGAGTTCCGGAGCG
AGGTGAAGATCATGGCGCGCATCGAGCACCAGAGCCTCGTCCGCTTCTACGGCTACCTGG
AGCACGGCGAGGAGCGGGTGGTGGTCATCGAGCACGTCCCCAACGGCACCCTCCGCGAGC
ACCTCGACCGCCGCCACGGCCGCTTCCTCGAGCTCGCCGCCCGCCTCGACGTCGCCATCG
ACGTCGCCCACGCCGTCACATACCTGCACATGTACTCCGACCACCCCATCATCCACCGCG
ACATCAAGTCCTCCAACATCCTCCTCACCGCCTCGCTGCGCGCCAAGGTGGCCGACTTCG
GCTTCGCGCGCCTCGGCGCCCGCCGGCCCCCCCCCGCCCCGCGGGGGGCGGGCGGGGGGG
G
