Contig Data
morexGenes
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Map Locations of contig_1570388 (2871 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1570388

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15310 1 944 bp MLOC_15310.1 Available Available LOC_Os06g12160.1, FRAME:-2, EVALUE:5e-68, 13106.m01321 protein AAA-type ATPase family protein, putative, expressed





CDS Structure of MLOC_15310






Contig Sequence (2871 bp)

>contig_1570388 2871 assembly3_WGSMorex_rbca.fasta
GAAATAATGGATGCATTTCAGGAAAACAAAATTCACACAAGAGATGAGCTTCGATATTTG
GCTTCATTATTTCATGTGTAAAGCAGCAGCCCGCACTCAAGCAGCAGGGAGAAACTGTAG
ATCAATGCAGTGCTGAAATTAGACTAGGAACTAAGAGAGATTTGACTATCACTATAGTAC
CAGCATATTATATGGAAAGGTGGAAGACTAGTGCCATCTGATAAACCATAAATGGTTACT
GTCATAGTCTTTGTTTACAAAGAGAATGTCCAGTATTGCCGTATTACACATCCGATTAGG
TGTTCTGGTTGCTTCAGGTATGCTGCTATCAGTCTGCAACTAATAGTACATTTGATACAG
GAGGGACCGAGGGAGCTAACCACACAATTTTTTGTGAACTGAAAAAGCATAAAATTGCGC
AGGATATGGTCGAATAGGAGAAAGGGCTTTTCAGGTAATATAGAAGTGATCCATCATTAA
CATTCCATTCAGTTGTCACATAATATAACTCCTATACACCAAATTCAAATAAATTTACCT
TCGACGTGAGACTAGAACCGGTTATGCTGATAAAATTTGCTCCAGCTTCTGTCGCAAGTG
CCTTTGCCAAAAGAGTTTTTCCAGTTCCAGGAGGCCCAAAAAGCAATATTCCTTTGCAAG
GCTGAACAAAGGTCCATACAGACACATCATGTTAAACATACAACTATGAAAAACATAAAG
ATATGCATACAGAAGTACACATCTGAGAAAGCAAACTAAGATTTAGACTTTTCTTCAGAG
ATACTCTTATTTTATAGGAAGTGCTGTAAGAATTCTAGCAGTGCTTTTCATGGACTTTGG
AACTTGATTTATGAAATTGAGTCGTGTTGTATGACATAAAATGGCATCACATTAGTATCA
CTACATCAATTTATCCTGAACCCCTAAAGCATGAAGTTATAAGGATGTAATAATTTACTG
TTAATGGTATTGGATATCAGGAATGAGATTACTGTAGGAAAAAGGAAAACCCTCTAGCCA
GAGGCTTGGTTAAGGATAGCAACCCGATCCATTGTTTCATCTACTGCAGACTTGTAATGC
TAGTGCTGGCTCACTAAAAACATTCCAACTCACTAGACTAAGGACCAATTATGTACGTTT
AGGATTTTCTTTTGTCTGCTTTAGTAGACATCCACGAGAAAACCTCTCCGCTAAAATCTC
CATAATAATTAATTATAAAACAAAATTGGGTAACATTGAGTATTAGCTGAGCACTAAACA
GACTTCCAGAGGCGTAGCACCAAACACCCCATCAAAATCACAAGTACCTTTTTTATTTAG
AAGTTAGGAATTAAAGATAAAACTAAGGTTCTTACTATGTTGGGATACTAGTTCAATGTT
GCCTAGCTATAAACTGGCAGTCACAGTAGTTTGTAAGCCCATATGGGAACAAGGGATCAA
ATTCAGTATTATGAAGCCCAAAATGCTACAGGTACATATGAAAATGCAAACGGTAAGCAT
TATTACCCTTAGCAAGTTCCCACGCGAGAAAAGCTCTGGTCTCCTCATTGGAAGAGTAAC
AAGTTCATCCAGTGTCTTCTTGACATCCTCGAGAGCGCCAATATCATCAAATTTAACTCC
AATTTCATGGGGAGGTACAACTGCTGATATGAAATTGCGCTCAAATTCATCTTTTGCCAA
CATCTGCAGCAAGACAATCTTTGAGGTTGGACATCATCACAGCATAATCTTGCTACATAA
GAGCAGGCATGGTTAACTCTTAGGAACAACCAAACAACCTAAATTACCTTCATGTTTTCA
GAAAGTGACTTAGTTGAAGCCTCCAGCTCCCTTAGCCTCTCGATTGCTAGGTCCAGACTT
CAAAGAAGAAAAGGTATCAACAGTCAGTGCCCAGCCATAGATACAACTGAATGCCCAGAC
AACTGATGAAATACCTCTCACGGGGAATGACTAGCTTGTCACCCTTTATGGAAGGATTAA
TCGCTGACGATAAATAGTGACTTCTAGCCCATCCAATGACCTTCTCCGCTCCTGCATCCA
CATACAAAATTACAAATGCATACAGTAAGTAACTGTCCTGCTTCAACTTAAGGCGCTTTA
AGTTCTTTGATGGCCTGATAAAAGTCCATCACCATACAGTCATACGCCCACAAGCACCTG
CAGCAACAAGAAAACAAATACAAGCATATTTCGAGGATACATTTGGCAAGGGATGGCTGT
TGCAGCTTGACCACAAAATTGTGGTTGGATCTGGCAACTGCAGCATTCCGCAAGTAAGGA
TAGAGAAATGAGGAGAGAGTCTCCTTGGCCCGATTCCTATTTAGGACTGATGGAGGAACT
TTGGTGACCGCCAACGACAAGTCGTGTAAACAAGGTGGCATGACATGCAGCTGCATCCTA
CACCATTGAATACCAATGATGTTGGGGACTCCAACCACAGTGACCAGAGATTGGTGATTG
AAAGTGTTAGAGTATATATAATATAGCCATGTACTTCTTTGTATTTATCCCATTGTATAA
GGGGTTTTCTGCATATAGTCCACACATGTACATGTATATATATCAGCCTATGGACTCATG
GAAATACAAGTTGCATATTCCTAACATGGTATCAGAGCTAAGGTCNNNNNNNNNNGTCCT
GGCTTTCGCAATTTATTTAAAAAATTGTTGGTAGCCCCGCTCTGTGTCCACATAGAGGCC
TCTTGAGTCATACGTGAGTTTCGCGCGCCGGCGCTCTCTTCCGGTTGCACGTGTTGACTT
GTCTTCCACGTCACATGTGAGAGGGGGTGTTACAGTATATGTGGATTGCACTAGCCCTTT
CCATCAGTTTGGACTTGTTGTCGTCTTGGCAAGCAGATTCAGTTACCATAT