Contig Data
morexGenes
Links



Map Locations of contig_1570222 (2020 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1570222

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15246 1 542 bp MLOC_15246.1 Available Available LOC_Os05g19600.1, FRAME:-3, EVALUE:5e-36, 13105.m02073 protein expansin precursor, putative, expressed





CDS Structure of MLOC_15246






Contig Sequence (2020 bp)

>contig_1570222 2020 assembly3_WGSMorex_rbca.fasta
GGCGAGGCGTGTCCATGCGGCCTGCGACGTGTCGAGGTGGGGGCGCGGCGGGTTCCCCCC
CCCGCCGTTGTTGCTGGGGAGCGCCCAGTTGGGCGGGCAGAAGTTGGTGGCGGAGACGGT
GATCTGGGTGCCCGGCCTGCACATCTTGCTCCTGCCCGTGTCGCAGTAGATGATGTAGCA
CGCCCCGCACATGGCGCCGTCGTTGAAGAGCGCCGTGCTCAGCGCGGCGTTGTTGATCCC
GTACCCGGAGCCGTACAGGTTGCCGTACCCACACGCGCCTCCTGCATACATACAATTCAC
ATGCATCATCAGATCAACATCAACCAAGAGCTAATGACATTTCTACAAATCTACGCTACT
CTTTACAGTTGCAGAGGAGATCTTAGTAAAGAAGTGGAAGGGAAACAGTCACCGACCCAT
GGTGCCGGAGCCGTCGGCGCCGCCGTAGAACGTCGCCGTGGCGCTCGTCCAGTAATACTG
GGCATCGACCCCATGAGAAGCTATTCCACAGAGCACACCGAGAAGCACTAGTGCTACTGC
TGTCTGTTTCCCCATTGGATTGTTGAAGATGACAGACAGAGAGCGATACTAGCTACTTGG
GCCAAGCAAGTCTTCTAGTAATATGCTGCGCTCTGTGTACTGTGTACCTTACTGCACCCT
GGGCTTTATAGTATGATGATGAGCATGCATCTGCCTCTAACTGTTACGGTTGTAATTGGG
TACTTGGGTTAACTTAGCCGCCCTCCATTGCTGCTTATTTGACTTTTGGCACGTCCAGTT
TTCAAACTAGTAAAAGATATATACTCCTGACGTGGTGTCCATGTTCTTGATGCCGTAAGA
GGTTTATCAATGGATGGACAAATTCCTGCATTGTCAGTGTGCATGTGCCCTAACTGAGAT
CCACACCGCCGTGCATGTGAGAGAATCATTCGTGCTGAAAAATTCAACCAGAACTAGATG
GTGGAAGCAAAGAGTCTGACCAAATTTCAGAAAAGTACACTATGTGTAATTCTATTGCAG
CTGTACGAGAAGCGATTACATTTCCTAATTTAATGAAAATCAGCAACAGCTGTAATCTCC
TTGCGAGTGGATCTCAATCTGGAGCTGTCCACCGACCCGTCAAAATTGGCACTAAACTTA
TTCGATGCATTTGTATACCTTGCATTGCCGACGCAAAATCTGCGCATCTCAAAACTAACA
TGTTTTTGCACCACCGCTTGACATCCCAAGAAGCTATTCACATTAGCATCACACAAGAGC
TCCCCACATTAGCCTATATATGTGAAGTATTGTCAGGATAGTGTCATGTTCTGATTTGTG
ATTTTAATTTTTGTTGATAGCTTACCAAGCTGACCACTTGGTACTAATTTGTGATTTTAC
TTGGCTAAACTAACAGTAGGCTAGCTAGATTGGCCTACAATGGGTACATTCCCACTAGGT
ATGCTACGCACTAGTGTACCTTCCGGACGGAATAATTATTTGGATTGGGACTTGTATATG
TATGTTAACTCTAAACCTCCTGCAGGTCAATCATGTACTTGATCCACCAATATTAATTAA
TTACCGGGCTCTCTACATTGTGCTACGTCGTTGCGATTAGTTATTCTAGGAACATGTAGG
GCCCGTGAAGCAAGGGGATCTAGATGGTGATAACATGGCCCATTGGCGCTGATCAGATTA
AACTGCAACTCTGAAGCTGACCGAATAACTACAGAGTTTAAGATTGGTGATGTTTCGACC
GACAGAGAGTGATAAGCTAGCGGTGAGATCCAGAGTGGTAAGTACGGTAGTTAAGATCCC
GTATGAACACATCAATGGGATGGCCTCTCGATCTGTATCAGCAAGGCACATGGTTTCTGT
TTTCCGTTTCTTTTTTCTTGTTATATGACTACGGGGTTTACCATCTCACTTTTTTAACAG
TTTTTTTACGGGTATTTTTTTTCCTGTTTTGCTAAAACACATCTAGATGTGAGATAAATA
TTGCACATCTAAGTCCTATCACTAGTAGAAAACGGGCCTT