Contig Data
morexGenes
Links



Map Locations of contig_1570211 (4495 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1570211

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15242 3 2584 bp MLOC_15242.1 Available Available LOC_Os09g31486.1, FRAME:+3, EVALUE:0.0, 13109.m03151 protein DnaK family protein, putative, expressed





CDS Structure of MLOC_15242






Contig Sequence (4495 bp)

>contig_1570211 4495 assembly3_WGSMorex_rbca.fasta
GACCCAGCCCAAGCTCGAGCGCCAGCCAGCCATGGCCATCGGATCTCTCATCGCCTCCAG
GCTGGCCCGCTCCGGCCACGCCCTCGCCGCGCGCGCCATCGCCCAGGTGCCGCCACCCCC
TTCCCCCCTCCGCATCCCATTGTGCTTTAATTTCTTCTTGTTCGACGGCCGAGGCCTGGT
CCCGCGGATTTGGCCGTCCATTGTTCGTGATGATCTGATGTGTTTTTGTGCTTCCGCCGT
GTGATCTGCGCAGGCTCCCAGGACCCACCAGCATCATCACGCGGCGTCCCCCCTGCTCTC
CAGGCTCGGAGCCGTGGCCCGCGCTTTCAGGTAATCCTCGATGCTGGATGTGTAGATCGT
CTACTGTGTGCCGTCTGTATCAGTCTGCTTTTTTGCTTGTTCGGTATTGAGACGGACGTA
TGTTCTGTGCCTGTGCAGCTCGAGGCCCGCTGCCGCAGATGTCATCGGGATCGATTTGGG
TACTACGAACTCGTGTGTCTCCGTCATGGAAGGAAAGGTGCGATCTTGTTCCCTGATCAC
TCTGACCCTGAAATTTTACCATGTTCTATTGCTTGTAAGACGGCTTGACAGCACTAGCAT
GTCTTGAATTTGTAAGGCAATAGCTGTATCCAGATCACCAGATGCAACTAATAGTATATC
TTTGAAGTGTTGTGAAGTTCCAGGTCGATGGCTATGCTTCTAATTTGCATTGAATCAGTG
ACACAGCTAGTAAATTGTTGTCAAGTTGCAGTTTGATGAATATACATCCATACTTTTACT
GGTTGTGAACTGGTGAAACTGCTTAGTAAATTACTGATTGTGAACTGGTGAAACTGCTTA
GTAAATTGTTGTCAAAGTTGCAGTTTGATGAATATACATCCATACTTTAATTGGTTCCGA
ACTGGTGACACTGCTAGTAAAACTTATCAATTTGTTTGTGCAGACACCACGGGTGATTGA
GAATGCTGAAGGCGCGCGGACAACACCCTCCATTGTTGCCACCAACAACAAAGAAGAGAT
CTTGGTTGGCATCACTGCCAGTCGACAGGCAGTAACAAATGCCGAGAACACAGTTCGTGG
GTCCAAGCGACTGATTGGTAGAGCTTTTGATGACCCCCAGACACAGAAGGAAATGGATAT
GGTGCCTTACAAGATTGTCAGGGGAACAAATGGTGATGCCTGGGTGGAGATGGCCGGGAA
GGCATACTCCCCAAGCCAGATTGGTGCATTTGTTCTTACCAAGATGAAGGAAACTGCAGA
GGCTTACCTTGGCAAGTCGGTCTCCAAGGCTGTTATTACAGTCCCAGCTTATTTCAATGA
TGCTCAACGTCAGGCCACCAAGGATGCTGGCAGGATTGCTGGGTTGGAGGTGATGAGGAT
CATCAATGAGCCCACTGCTGCAGCTCTGTCGTACGGAATGAACAACAAGGAGGGCCTGAT
TGCTGTATTTGACTTGGGTGGTGGCACATTTGATGTATCAATCCTTGAGATTTCTAATGG
CGTTTTTGAGGTAAACTCCTTTCTTCAGATGACCCCTAGTTTGTTGAAACGTGTGTTCTG
ATCATTGTACGTGTATCTTTTGTTCTGATCATAATGCTTGTATCCTGTTCAGGTCAAGGC
GACCAATGGAGATACTTTCCTTGGTGGTGAAGACTTTGATGCTGCATTGTTAAACTACCT
GGTTAGTGAATTTAAGAACTCTGACAAGATTGATCTGAGCAAGGACAAGTTAGCACTGCA
AAGGCTCAGGGAAGCTGCTGAGAAGGCGAAGGTTGAGCTTTCCTCGACCCCACAGACTGA
AATCAATCTCCCCTTCATCACAGCAGATGACTCTGGTGCGAAGCATTTCAACATTACCTT
GACCAGATCAAAGTTTGAGTCTCTTGTGGGTAATCTCATTGAGAGAACACGCATCCCATG
CACAAACTGCCTCAAGGATGCTGGTGTTTCTGCAAAGGAGGTTGATGAGGTTCTACTGGT
TGGTGGTATGACAAGGGTGCCAAAGGTCCAGGATATTGTTTCTCAGATATTCGGCAAGTC
GCCAAGCAAGGGTGTCAATCCTGATGAAGCTGTTGCCATGGGAGCTGCCATTCAGGGTGG
CATCTTGAGGGGTGATGTGAAGGAGCTCTTGTTGCTGGATGTCACACCACTTTCCCTTGG
TATTGAGACTCTTGGAGGCATCTTCACAAGGCTAATCAACAGGAACACTACAATTCCAAC
CAAGAAGAGCCAGACCTTCTCCACTGCTGCAGATAACCAGACACAGGTTGGAATCAAGGT
GCTTCAGGGTGAGAGGGAGATGGCTACAGATAACAAGCTTCTTGGTGAATTCCAGCTTGA
AGGCATTCCACCAGCCCCGAGGGGTATGCCACAGATTGAGGTCACTTTTGACATTGATGC
CAATGGTATTGTCAAGGTGTCAGCAAAGGATAAGTCCACGGGCAAAGAGCAGGATATCAC
CATCAAATCTTCAGGTGGTTTGTCTGACAGTGACATCGAAAAGATGGTGAAGGAGGCTGA
GCTAAATTCTCAGAGGGATCAGGAAAGGAAGTCTTTGATTGACCTCAGGAACTCTGCCGA
TACCACCATCTACAGCATCGAGAAGAGCGTCAGCGAGTACAAAGACAAGGTTCCTGCTGA
AGTCGTCACGGAAATCCAGTCTGCTGTTTCTGATCTGAGAGCAGCAATGGCTGGTGATGA
TTTGGACGCCATCAAGCAGAAGCTGGAGGCAGCGAACAAGGCAGTCTCAAAGATTGGACA
GCACATGCAGGGTGGTGGCGGCGCTGCCGGCGGCGACGGTGACAGCGGCAGCAGTGGTGG
CGACCAGACTCAGGAAGCTGAGTACCAGGACCCCAAGGAGGCCAAGATGTAGATTTGTTC
TGCATCAGGTTTCTTCTACTTTTTTGTGTACCCAGTTTAGGAAGTTAATATCTTTATCCT
ACCTCCGTCTGCTTAGGTTTCTAAGAGGGCTACGACGATACCTGTAACATTTTGGCAATT
GTTTGAATTGCGGATAAATTGTGAGAGGAGCAAACTCATAACCTATATCGGTTAATATAT
TTGGCCATTTGCCACATTGTCTTTTTGCAAGTTCCTGATGTATTGTCTTGTTTATTTATT
AAGTTGCTGATGTTTTTTTTATATATATTTACTACTGTATAAGGTCCTTCTATCCTGATA
ATATGGTTTGTTTAACATGTCCTAATTCTTAAAGTTTTTTATTTGGAGTTGTAATCTGGC
CTCCAATGCAAAGTGAAATACAATCGCTGGTAATCTGGATGAGCATTGGCACTGCTGCAT
GCATGCAGCGTCGCTGCAACACCTTCACCTTGATCCAACCCTGCGAGCTCAATTGCACCC
TGAGCTACTCTTTATCGTCGTTGTGACTTGTGAGTTGTATATTTTTGGCTTGTGAGTTGT
ATTCTTGTGATGATTCTGTTTCGTTGAACCAACTTTTGATACTACCTTATTGTCTTAGTA
ATCAAGTTCCGTAGATATCTACAGATTATCTCTATCTACAGATTATCTCAACGAAATTTC
AGCAGAAAAGTTACTTTGGTAGGCCGACCTCTTCGAGGAGGTTAACGGATCTTTTCTTGC
AAATATCGTCTTGTGCTGGCGCGGTGGCTCTTGACCAGCTGGGATATGTCTGGTCTGGAA
TGGTTTGCTGGATTGGCATATGGCAGATCAGCTTGTTGGTAGAGCAGGATCGGATGGTGC
TGCCTTGTATAGATGCTGTGAAACCGGCAGCTCTCCTCTATGGACTTCTTCAATTTCAGA
TACCTCTTTTCTTGAAATGCCTCAACGCCGAACACTGGAGTTGAGCTGGTCATGGATGAG
TGAACTGACCATAGCTTATATTGTTGTAAATGTGCCTGTGATCTTGTCTAAGAAGCCAGG
CTCCGTACCAAGTGAGAAAAGAACACTCATTTGAGATTCTTAGAAGAAACATAAGTTGGT
GATCTCGAGGGACAACACAAATTCAGTTCCCGAGTCACAAGTTCCGATTGTACTTAGACT
CATACAAGCTTTGTGAGCAACGCAATCCACCAAACCCCCTGATCTTGTTTTCACATGAAC
TAGGAAATTATTCAACAATGTTACAGTCTAACAGGCCTGGTCATATCATGTATGTGTATT
CAGCATCTCCCAAAGTTCCTCACCTGCATCTTGCATTCGTTCCCAATAGCTGTCAAATTA
TGTCATGCTATTAAATAACAGATTGACATCACCATAGATTTTGATAGTTCCATATCCATG
CACCGAATTATTTTTGCTTATTTAGCTGTTTGGAATAACTTACTTTAGCATGTTTCACAA
CTGTTTTTCCTCACCAAATTAATAAAGCATATTCCATAGTTTAGCAATCACCTTCACTAC
TAGGAAAAGGGCTATNNNNNNNNNNNNNNNTAATGGCGCACCACACAAGCAGTGCGCCAC
TACTATATAGTAATGACGCACCATGTGAGGTGTGCCATTAGTGTGGTGGATACTA