Contig Data
morexGenes
Links



Map Locations of contig_1570161 (3970 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1570161

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15214 4 1736 bp MLOC_15214.4 Available Available LOC_Os10g10180.1, FRAME:+2, EVALUE:0.0, 13110.m00912 protein methyltransferase domain containing protein, putative, expressed





CDS Structure of MLOC_15214






Contig Sequence (3970 bp)

>contig_1570161 3970 assembly3_WGSMorex_rbca.fasta
TTTTGCGGGCCGACGGGATGCGGGGTCTGCTGGAGTTGCTCTTACTGGTCCACTTCCTCT
TGCATGGTTATGAGCATGATCATGTCCACTTCTTCATCCAAATCCGAGGAATCGAAGAAC
TCATCTTGATTCATTTGATCAAGCTCCATTGGTCCATACTCCTCGCTGGACGAAGGATCC
ATCATTTCCCTAAAAAATTGACAAAAATCTGATCAGACATTGTGTCGAACACATCCGGCG
CAAGGCGGAGCGAGAGAGTTGGCGGACGTACTGCGTTGTCTTCCGGGCCGGTGACGACGT
CCTCCGCGGCGAGGACGGGACAGAAGACTACTCTGTCGGAGCTTGCGGGGCAGAGGCTAG
GAACGGGCAAAGCTACGAGATGGACGGCACGAAGGAGGAAGAAGAGAGCAAAGAGCAAAT
GGACCCGGCAGTTCTGCCAGGTGGATTTGGTGCAATTTACCGTGGGGTCAGGATGTCGTG
TCCGACGTGACGGGTGCGTCCATTATTTGGGTTGAATATGAGGGATGTCGGCTAGTTCGA
GCACTTGAGACTCGTTTGAGACGCTCGGTTGGGTCGAAATTTCATGACCGATCAGTGATA
GGACGGCATACACATGTGTTTGAGACGGGCATGAGGGATCCGAGTGTAGATGCTCTTAGA
TTGCCCTCGTTCCACGTCAGCTTCTAAGGTAAGCCCTGTGTTGGCTGACATGTCTGAGTT
CTATTGGCTAGAGAGTTCCACTCAGATACCAACACAATCCCAAGCGCCAATCAAAGGCCG
TCATCACCACAGCCACACGGTCGAGCGTAGAACGACGGCCGCGAAAATCCCCGTAGCATT
TCCGAGAGCGGCCCTACAATGGCAGCCATCCTCGGGCGCGCCGGCACCACCGCCACCGGC
TGCTTCCGGCGGCACCATGAAGAAACCAGACGCCGCGGCCGTAGGCGAAATGCGGTCGTC
GTCGCGGCCGTGACCGGCACCGCGCCGCAGGAGGGGTCTCTGGAGCGGCCGGCGTGGTCC
GGGGAGACTCCGGTGTCGCGGCTCGTCGCCGCGCTCATCGCCATCAAGCCGCTCTACTCC
CTCATGAAGCTCGCCTCCCGCGAGGTCATCATCAGGTAGTTACTTGTTGTGCTCCTCGTG
AGCAATGTGGTGGTGGTGGTTGGACTTGGACGTCGTGATGGAGGAAGCCATGGATGATAT
TTTTCCAGGACGGCGGAGAAGTCCAACATCCCGTGGAGGGAGATGACGAAGAAGGTGCTG
GAGTCTGACGTGTACGAGGTGTTCGAGAGGATAAGAGACCCCAACATCGTCTACCCTGAC
TGTGAGCAGCTCATCCCACCATTCCGACCATCCCCGCTTCTTCGTCAGCTTTTTATTTTC
GACAGCAGATTTCTTCGTCAGTTGATTAGTTAATATCTTCATTGGCTGATTAATTCGTAT
CAATCGCATTGATTTAACAGTGACAAGATTAAGCTTTTTCCTTAGTAGTTCAGTCGTACC
TCCAATTGGATGGTCTGATCGATACGATACTGAGATATTGGCAAGGAAACAGAAGCATTA
ATATGGCCTGCTTATGTTGAGCAGATTATCTGAGCCCATTCCACGCCTATGACGAAGGGA
ACCTATCATGGCTGGTAACTGTTTGCTTCCCTCATATCTATGCACATTTTATCTGCTCGA
CTGAATGCAGAGCTCTTGTTTCTCTCTCTTGCTGATCACTGATGATGCAGGCTGCAGCTG
AGGCTGAGGCTGCTACCCTGTCGATTGCAAAGAGGGCCATACCCGAGGCTACTACGATCG
AAGAAGCGAACCGGATTGTTCGGGGAAACTGGATGAATGCAATTGAGGAGCACCACCTCA
AGTACTCGGGGGGAAACTGCCAGATCAATGACATTTTGGACATTGGCTGCTCTGTGGGAG
TGAGCACCAGATACCTGGCTGAGAAGTTCCCTTCGGCTAAGGCTGTCGTAAGTGCATCTC
TTGCCACATCTCTGAAAAATGTGTTGTCAAGGTTCAGTATCTGCTAGTGCTTTGGGGGGA
AATGATCAAATATTGTGAAAATCATAGCATCCAGAATCTCTGAAAAAAACATGCTATAAT
ATTATCAGTCTCGATGTATTCTCGGCTCAGTTTGATGAATATTGACGATTCTTAGGAATA
TTATGTTATAGCTATCTTTCTGCATACTGACGATTCTTTGGTTGGTTTCTATATGGATCT
GCTAATTTGGAGCCTTTTCAATTATCAAGGGATTAGATCTATCGCCCTACTTCCTGTCCG
TGGCAGCACAGAAAGAAGAACAACTGTCTCGGCAAAACCCTATTCGTTGGGTTCATGCAA
ACGGTGAAGCGACTGGGTTGCCACCGAATTCATTCGACGTCGTCTCCCTTGCTTATGTGG
TAATCTCTATCATATCTTGAAATGGTTATCACGAAATAAACAATTGTAATCTCCCTGTAT
TTTTGTCTTTCAAAAATCAACCAATGTTGTCTCATTAGCTGATACCCTCAATAATGTTGG
AAAGGGAGACAAAGACTGATTTTTTTTAAAAGAGAAGATGTTGAAGCGACAAAACAATAG
CTGTTCTTGATCATACACAATTGTAGTGATATGCATATGTTTGCATCTAATTAGGATTAT
AGACTTCTTTACATGAACGCTGTGCTAAGGACTTTGAAAAATGAAATGGTAGCTCGAAAA
TCACCATTAATGCTGCAAGTGCAATTCTATAAACACCTGCAGTGCCACGAGTGTCCAGCA
CGAGCAATAATCGGATTAGCGAAGGAAGCATTCAGACTGCTTCGCCCAGGAGGAACCATC
GCCTTAACAGACAACTCAGTAAGAAAATTCAGTTTCCCAATATGAAGTTATTACTGGTAA
CACAACTGTTTTGAGAAAAGTTCTGAAATCTAACTCCACTTCCTTTTGTACTGGCCTCAG
CCAAAGTCAAAAGTACTCCAGGTAATCTCGAGCAAAATTTACTGAAGCTCCTCATCTGAT
TCTCACTCACGTTGACTTAGAGTACTAATAATTTGTTACCGTTTCAGGAACTATCACCCG
TTCTGTTCACCCTGATGAAGAGCACTGAACCGTTCCTGGACGAGTACTACATGCTGGATC
TGGAGGATGCGCTGAGCCAAGCAGGCTTCGTCAATGTGTGCTCCGTGCTGACAGACCCCA
GGCATAGAACGGTCACTGCCACGGTGCCCTACTGAGTACTGACTGGATTGTTGATCAGAC
CTTCGAATTAGGGCTACATCATCACCATGGTTCACCAAAGCAGAATTCTCTCTTCAGTGA
TTTGGCTAGTGTAAACAGTCATAAAAGCTTATAGCAACTTGGGATGTCTGAGCCATATAT
ACATTCAGGGAGAAAAGAGAGTGGTTGTTCTACACCCAGACATACAACAAGCACGATAAA
CAGTAAGCACATAGCAAAAGAAATATGAATCTTTGTGGCTTCGATTATGACCAAAATTTG
TAGGCTATTGCGAATTTGTGTGGCCAAATGACATCCGAGCAGGTCCGATCAGTAGAAAAA
CATCTGAGTGTGTAATAAGTAAGAAAAGAACTTTCAACCAGAGGCGACAACTTTACGTAT
GTAATAAAATTGTTAAGGATCGAGTTCAAAAAATCCGGGTGCGTAATTGTAGACCATCCA
TCGGTACAAGCACATGACATGGTATGGTAGTATGATACGCTATCCCATATCCTACGAGTA
GTTCCTAGATGTATTGCTTCGACTAGTTCACTCTCGATCGGTGGCCGCATCGCCGGCGTC
GCTCTGCTCACAGTTGAAGTCGCCGGCGTTGTCGCCGAGAGGCCTGTAGTCATAGGTCTC
GTCCCGGTTCTGCTCACAGTTGAAGTCGCCGGCGTTGTCGCCGAGAGGCGTGTAGTCATA
GGTCTCGTCCCGGTTCGGCTCCCCGTCATTGCCGGGAGAAATAGTTCAGTTTGCGCTCGC
TGTTGACCTG