| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_1570145
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_15208 |
1 |
1069 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_15208
Contig Sequence (5500 bp)
>contig_1570145 5500 assembly3_WGSMorex_rbca.fasta
GTAAGAACCGGGACTAAAGGCCGAGGGCATNNGTAACGACCTTTTAGTCCCGGTTCTAAA
ACCGGGACAGAAGGCCCTTACGAACCGGGACAGAAAGCTCTTTTTCTGCTAGTGTTTCTT
TCTAGACGAGCCAATACCTTTACTTTACCGACGAATGGCCAACCTAAAAAAAATCTAACA
TCGAATCTTGCAACGTGTGCATAGGTTGGGGTAGCAAAATACATGTGCACATACTCGAGA
TGTTTATCCGGTGAAGGGATCATCATGATGCAACATGGTTAGTTACAAACTGCATCTCGA
TACCATCCTTTGATAGGGAGAAAGGGGTCGCCATCACCCCTGCGTTGTTGCTGCCAGCCA
GAGAAAGCATCATGCAATCAGGGACCGTGATGGGCTATCAGAGTGCGCTTCAACTAAGCC
ACAGCTGGTGTTGCCCTTTGGTGTGGCGGTGGCGGTTTGTAGCGAGTAAGGCTCTGCTCG
TGTCATTCCGTGGGAGCGAAGTGGGGCACGGGTGTATAGGATAGTGACTGCAATGAAAAA
GTAATTTACTATACGTGTAATCAATGTACACTAGGTCCTATTTATCAAGACGATTTGACA
CTGTACATAAGTCAAGATCATAAATTTGACACCAATGATAGGTATAATTTTGGTTTTGAA
TTTGGTATTTGACATGTTGTGGATGCCCATATCAACTGATGAACCAAGTTTTAAGTGGAA
TGCAGAGTACTTGTCACAAATGGACAAAGATGTAAATTAACCTATATGTCTTGGAGCTTT
TCTCCACCACCAGTTCGAAATTATAAAGACTTTTCAGCCAAATCTAATATGGTTATGAGC
CACAAGACATCCTCATCGTGCTACTAGTATTTTGTTGGTGGTTGTACTGCTGCTGCAAGG
ATTGAATTAAACTCGGTAGCGGGGTTTTTCATTTTTAGCTTCTTCTTCTCTTTATTTTGA
CTGTGTGCATCGTAATGCTATTAGGGTATTGCGTTGTTGCAGAAACTGAATATAATTGAT
ATCTTCTTAATATTAATATATTCCCTTTATAAAATAAAAAACAAGTGTGATCTCTTGCCA
CAACGCAACCAAGCCCACATCTCGCGGCCCGCAACTGCCGCTGGTGCAACGCCAGATATT
CCTGGAATTACCCTGTGGTGGTGGCGGCGGTCTCTACGACTATGGTTGTGCTCGTGTCAT
TTTATGAGAGCGAAGCGGGGTACAGGTGTATGGGATAGTGACCGCACTGTCAAAGTAATT
TTTTATATGTAAAATCAGTGTGCATTAGGTCCTACTTTCTCCCTTTCACAATGTAGTACG
TTCCTGTTTTTCGAGATTTAAATTTAATTATAAATTTAATCAACAAGACTGATTACGAGG
GGAGCAAAAGTTATACTACTAAATTCGTCAATTGCGGCGGGAAAAAAAATTATACCACTG
CATTTATACTTTTGAGACGATATAACTTTTTTGCTCGTGCCGCAACAGTTTCTTTGGTTA
ATTGTATGGTCAAATTTAGATTTCAAAAATAAAGAAGGAATTACATTATGGAATGGAGGA
AGTAATACTTATGAAGTCGATTTGACATCATATATAAGTTAAGATCGTAAATTTGACACC
GATGTCAACACCGTGGATGCCGATATCAAGCAGATAAACCAAGTCTTAAATGAACTTCAG
ATGTTAGCGTCCAACTCGGCCTAGCCCATACTCACCCACATTCTGGACGTTTATCTGCAC
ATGGGCCAGCATTCAGCGGAGAGTCCACTTCATCTCAAAAGCCCGACGTTCTAGACGTTT
ATGCGCACATGTATCTGCATTCAGCCGAGAGTCCACTCTACCCAAAAGCGCGGACTGATG
GAAGCCCGGACATGGCCACCTCCCATAGGCCACCTAAACCGAGCTAGCAAAGTCCCTCAG
AAAGGCATGGCGATGCTGGCTCTGATACCAGATGTTAGGGTCCAACTCGTCCTAATCCAC
ATATATTTATATTTTAAATGTTTATGCGTACATGAATCATCATTCAACAGAGAGCCTACT
CCATCTTAAAATCCCGTACTGAAGGGAGGAGGGAATCTCTGTCTTATCACTGATCATGGC
CTCCCCGGTAGGCGAGGTGAGACAGCTGCCATAACAGTAGAGTACTTCTCACATATAGAC
AAAGATGATATTAAGGTATGCTTTCTTGGTCCCGTAAAAAAAAGGTATCCTGTCTTAGCT
TTTCTCCACCACCAGTAGGAGAACATAAAGATTTTAATGTCAGCGCATAAAATTGGGAGG
GAGAAACTTTGATCTTGCTACCCATCGATCGGGTTTGTATCTGTATTGAGCAGCTCACAT
TTCCCATGCTTGATCGGGAGAGAAAATATCTAGCAGAAGAAACGTAAACCAACACTCTGC
TCGACTAGTTGGCCTTCTGGATCGATCGACTGCGATAAGAAAAGCCGAGCACGTATTCAA
GGACAATAATTCCATCCGCTCCATACCAATCCATCGACGCCGACATGACGCCATACCTGC
ATGCATCATTGCATCTCTCCAACCGCCCGTGACCTGAGAAGGACGGGCCAGCATGTGGCA
CCTCTACCTACTGTCCTCCTCTCCGGCGCGGACGACGCATGGCCACCCCGCCACCCAGTG
CAACTCGCCTATAAGAAGCAGCGTACACGATGCTAAGCCTAAGCTCACTCAAACACAGCC
ACACAAGCTAAACTGTCTCGTCAGTAGTAATATCAAAACTTCTCAGTGAGCAATGGCAAA
GAGTCTCGCCGTCGCGCTCCTGCTACTGGTGGTGCTCGCGTCATGCGACGGGCGGGAGCT
GAAAGAGAAGGTTGCAGCGACACACGGTGCCGGTGCCAGCGGTGGCGTCGGCGACTCCAA
GGCTTTGGACTTGCCGCTGCTGGGGGGAACCGGTACCGGAACAAGCACCATTACCGGCCC
GCTGGTGGTGATCCCTGGGATCCCTGCTATCGGCCCATGATCATCTCTACCTCATGTGCT
GGCGCTACAAGAAGCTAAAGCTCGCCTTGTCGCTTTAGATTCTATAGGTAGCACCGCCAG
GAAGAAAAAGGCCGACGTTTCGCGAATGTCCATGTTCGGTACTGAGCGTCTGTGTCAACT
GTCATTTGTATTTATTTCCAGTTCCCGTCTCGTATTTTTCGTTCCTTGTGCGCTACATGT
ATCAACAATGACATAATAAATACGTACTATGTTAGTGTGATCGAGTCTTCTTGGATACAA
ATCTCGACTGGTTACGTCACTACTGAAATCTGGGATTTAGCGGAGTTGCAAATGTTTGCC
TAGTGCATTTCATCGGGACATCGGCAGACTTATGTATCTGCCGAGTTTGACACAAATTTG
TATCTGGCAGTGAGAGAAAACTCGGCAAACTTCACATTTTCCTAGTACCAGCGAAAAGAG
ACAAGGCGAAAGAAAAGAACATGAAATCTAAAAAGCGGCCGCCCATTTATCGGAGAGAAG
GGGCGGTCGGCTGGGAACCGCATGCGTGTGTGCTTCCTTACTTCAGGTGTCATCTTCACA
TGCATTTATTTCGTTTTTTTAATTTTTTTAAATCATATATTTCAAACCGTGCGTTGGAAT
TCAGATCTATCTTCATCATTGGATTCTTCACGATGAGATCTTTGAAATTAGATCCTGCAT
GAGTATGTTTCGAAAAATTTATACCAACTTCTGATGATATATGGTGCAACTTCAGTACTG
CATTGTGCAACTTTAGTACTACAAGGTGTATTTTTTAAAACAATTTGTTGGACATGTATG
ATCTGAATTCACATGAGGTTGCAACCTAGCAACCATGGAAACTTGATATGCATCTAGTCC
ACTGTCCCGGCAAATTATGTAGCAACCCTTGTCCCTACTTGTGGATGTGTAGTTCTTTTA
ACAGTTGACAAACCCTACCCCACCTTCTCTACCAATGATATGTGGAACTTAGTATGTTGT
TTGAGCCAACTTTCTATTATTTGATTTTCAACTTCTTTTCCTTCCTACTTGTGGATATGT
AGTTTCAGTTGGTGAGGGCAACAAACGGAGTTGCACAAAGTCTTTTAGGCAGTTGGCCAG
ACCAACATATAAAGTTGGACATCTCACATTCATGAAGGTAGTGAAAAGTTACATATTCAT
GAGGGTAGTAAAGTTGCATATAAACGGGGGCGCTAAAGTTGCACATCCCACTAGAGGGGT
GGTTCGGAGTGCTACTAGGGAAATTACACATCCATGAGGTATAAGGGATAGTTGCACACC
ATTGGTAGATAGTTGGCGGTGACAGCATCCGAAGGTGCACATCCACTGTTAGACAGTTGG
CCGATGCAGCAAAAAGTGAAAGCACAAACACAGACAGGAGAGAAGTTGCACGTGAACTAC
TAGGTAGTTGGCCTGAGCAAAACAGGAATTTAAACATCTCACTAGGAGGAGGTAGTTTGG
GGTGGATGTGCCATTAGTGAAAACTACACTTTCACGGGGTAGGCAGAAAGTTGAAGATCC
ACTGTCATGTAATTGCGGATCCACTCCTAGGCAGTTGCACAAAACGGAGGCCAAATTGCA
CAGAAAAAATATTACTGAACATACCAATGCGGGATTTAGTTTTAAAGATCTCGTCGCGAA
GAATCCACGGTGAAGACGTATATGAATTCCAATGTTTGAGTCACAAGTTATTGCTTTTTG
AAACAAACTGAAATCCAAATTAAATATGTTCACACCTATTTTATGTGAGCACTTTATTTT
TCTAATCAAAAGGAAGACAAATACTTTCCTTTTTGGGATGTTGGCTTCCGGCTACTAACC
AGTCAATGGTCACTCTCTAGACGTGTCCCAAAAAGTTTACTATATTTTAGGCTGGCCGCT
CGCGAAGGCCAGCTAGCAGCCGGCCGCTACCTAGACCTGTTCAACAAAGAAACACGACAG
GAAAGACTAGCAGGTGGGCCACACTAACGAGCAAGCGACGGAGCTGTGATAGTGCTTTAT
GTTTGCCGGCTTGCACTAACGGAAAGTGTGCAATATTTTTTGACTTATTCCTTTTTATTA
TCAATTTCGATGGGTACAAACTTTTATTTTCAAGCAGACTTTTGAAAAGCATTATGGACT
TGAGTACTGGCTTGAAATCATTTTATTCCATTTCATTAATTCAGTGGAGAATTATTTTTA
TAAAAACAATTGCCTCTGTTGCACTGCAACCATTTCATCATCTCATTAAAAAAATCACAA
AAATTTGGAGATGTCAAGGGATGCACGTGATTCACTTTTATGCAAAAACCCAGTGGTGTT
CTTTGAATTTGAGAAAAAGGAACACATTTTTATTCTGGTCCACTTTTACAATTTGTATTG
CAACCCTATTTTATCTTGCCCTTTTGGCCATGAAAATTTTCTTGGTTGAAGCTCATCCAC
TAGTAGAAAATAGAGCTTTGCTTCGGGCCTGGCCAGCCCATTAGTCCCGGTTCTTCACGA
ACCGGGACCCATGGGGGACATTAGTCCCGGTTCATGAGCC
