Contig Data
morexGenes
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Map Locations of contig_1570128 (4064 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1570128

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15202 3 3258 bp MLOC_15202.1 Available Available LOC_Os03g57780.1, FRAME:+2, EVALUE:0.0, 13103.m06336 protein protein kinase, putative, expressed





CDS Structure of MLOC_15202






Contig Sequence (4064 bp)

>contig_1570128 4064 assembly3_WGSMorex_rbca.fasta
GGGCGGCGCGCCGCCGCTCCCGCTCAACTTTTCGCTTGGCGCACTGGTCACCACGCTGTC
CAGGCTCCCCGACCTCAAGGTGCTCACGCTCTCCGGCCTCGGCCTCTGGGGCCCCTTGCC
GGGGAAGCTGGAGCGGCTCGCCGGGCTGGAGATCGTCAACATGAGCCGCAACTACCTCTA
CGGGCCCATCCCGAGGGGCCTCTCGCGGCTGCAGGGCCTGCAGACGCTCATCCTCGACGA
CAACATGATCGGCGGCGAGGTGCCGGGCTGGATCGGCACCGCGCTGCCTGCTTTGGCCGT
GCTCAGCCTGCGGAACAACTCGCTGGCCGGCGCCGTGCCGGAGTCGCTCGGGAGGACGCC
GTCGCTGCGGTCGCTCGTGCTCGCCTCCAACAACCTCTCCGGGAACCTCCCTGACATGCG
CGGCCTGGCGAGCCTCCAGGTGCTCGACGTCGGCGGCAACTCGCTCGGGCCGGCGTTCCC
GCGGCTCGGGAGGAAGGTGGCATCGGTGGTGCTGAGCCGGAACAAGTTCACCGGGGGCCT
GCCCGCCGCCGAGCTGACCTCCTTCTACCTGCTGGAGCATCTGGACGTGTCGCAGAACCG
GTTCGTCGGGCCATTCCCGCCGGCGCTGCTGTCGCTGCCGTCGCTCCAGTACCTGAGCAT
CGCCGGGAACAGGTTCACCGGGGCGCTGTCCGACAAGGTGCCCTGCGGCGACAACCTCCG
GCTGGTCGACCTGTCGTCGAACCTCCTGATGGGGAGCGTGCCAGCCTGCTTGAGGCCAGG
CGGGAAGCCGGCGACGGTGGTGCTCTCGTCGGAGAACTGTCTGGACAGAGGCGACGGTTC
GCAGCACCCGTCGCCGTTCTGTCAGAACCAGGCACTGGCCGTGGGGATAGTTCCTCGTCA
CAATGAAAAGAAGAAAGTTAGCCGGCACGCGGGCTTCATCGCCGGCATCGTGATGGCGGT
CGTCGTCGCTGTCTCGCTCTTCGGCGCCATGGCCTTCTTCGCCGTCAGGAAGATGACCAT
GGAAGGGGGGAAGACGAGACCCTCGGCGACATTGATGGAGGACCATACTTCCACTTCGAG
TGCCTACCCTTCCAAGCTGTTCGCCGATGCACGTATGATCGATCTCTCAATTTCATCTTG
TGACTTGTAAAATTAGTCTAACATACTCTGAATTTCATCTTGAAATCAAACTTGTTGAAA
AATCACTGACATTTGCTTCCATTTTGTCATTTGGGACGACAAATAAAAAGGTTACATATC
ACAGACAGTGAAGCTAGGAGCATTGGGGATCCCACCATATAGATCATTCTCTTTGGTCGA
ACTCGAGGCGGCGACGAACAACTTCGCAAACTCTTGCCTGCTCGGGCAAGATTCTTATGG
CGAGGTACAGCACCGCCGATCTCTCCACTAAATTTTCTTGAGTCTGTTCACAATTGGGCA
AAGGTGATGCCTGCAATTAACCTTGAATTGTTCTAGTTATTATGCCCATGACCATGAGTT
CATTATATCAGATGTATCTGGGGAAGCTAAGCAATGGTGCCGCAGTGACAATCAGGAGCC
TCAAGGTGAAGAGGAACCAGAGCTCCCAAAGCTTCAACCGCCACATCGAAACGATATCTA
GGCTCAGGCATCGGCACTTGGTCAGCGCTCTAGGGCACTGCTTTGAATACGATCTCGACG
ACTCCACCGTAACCCAACTCTACCTCGTGTTCGAGTACGTGCAAAATGGGAACCTGAGGA
GCAGGATTTCGCGTAAGTTGTTGGCCCTTATCTCCTTCATTTATTCAGTTGCTCTGGCAA
TCCAATGGCTGAATGTTTATGTTGCTTGTTTGAACTGTTCTTACCAGAAGGAACTGAAGG
GCGGAAGCTTACCTGGGGGCAGAGGATATCGGCCGCCATCGGTGTCGCCAAGGGCATCCA
GTTCTTGCATGGAGGGATCATACCCGGTCTATTCGGGAACAATTTGAGGATCAGCAACAT
TCTTCTAGACCAGAACCATGTCGCCAAAATAGGCAGCTACAATATCCCAATCCTAGGAGA
GGCTGCAAAACCTGAGGTAGATCAGCGAAATACTAACTTATGATGTGAAACATCCAGCTA
CACTTTGTAGAGTTTTATGGCTATTTGCTGACCAACAACAATGCATGCTGTTTGACAATC
CAACCAGGGAGGGGCTGGAAGCAGACACCAAACTGATAGGTAACTACAAATTTCAAGCTT
CAGTTGCTTCTCATTTAGCAGTTCCAACTTCCAACCGGCACAACTAATATTCTTCTTCAT
TCCTTGTTCTGTGTTGTCACTTTGCAGCACGATGCTCAGCGACAAGATCGACATATTCGA
TTTCGGAGTGATCCTGCTCGAGCTTGTGTCTGGGAAGCCGATCACATCGATATATGAGGT
GGAGATAATGAAAGAACTGGTATGTATGATCTATCATCACCTGTAGTTGTAGTAGCTGGT
AGTGCACAAACCCAACACAAACACACACCTGAACCTCATTGTGCTGCAGCTGCTGTGGGC
AATGGCGGAGGAGGACAGGGCCAGGAGGAGGAGCTTCGTGGACCCGGCGGTGAGCAAGAG
CTGTTCAGAGGAGTCACTGAGGACCGTCATGGAGATCTGCCTGAGGTGCCTGGCAAAGGA
GGCGGTGCACCGGCCGTCCGTCGAGGACGTGATCTGGAACCTCCAGTTCGCCACCCAGGT
GCAGGACGACTGGGAGGGCGAGATCCGGAGCGGCGACGGGTCCCCGGTGTCGTCGTCCCG
GACTGCCAGGTCCTCCAGATTCAGCAGATAGAGATATAGATGATAATAAACCAGCAGTTT
CTCCCGTCCAAATCGTCCAGCTCCCAGGAGGATGGATGAACATGCCGCTGCCGGTGATGA
GAGTTGTCCTCCAGGATGTGCAGAAAAGGAGGCTCCAACTGCTCCGGTTGTTTTCCCTCT
GTCAGTGTAGAGCTTTTTTTCTTCCTCTGCTGTGTTTCTCTATGAAGCCTTGATCCCAGA
AGCAAATTTTCCTTTGTTTCATCTCTATGTGTAATAATGTTGGGCAAGCATCATTCTGTC
AAAAGCAAAGTTCTGCTTCTACCGAGGAATAAAGAATAACTTTCATCAGTATAAAAACTA
CTCCCTCAGTTGCATAATTAGTGTCGTGGTTTTAGTTCAAATTTGAACTCAAAGCCACAG
CACTTGTTACTCCCTCTGTAGCAAAATATAAGACATTTTTTGGTGTAGTTGGCTACAAAA
AAATGCCGTGCATTTTGTTACAGAGGGGGTATTATGGAACAGAGGGAGCAAATTTCCGCT
TGTACGAAGCACCAAGGGTTAAAAAACTAGCAAGTTGCAACAACTTCTAGCTATATATAA
AATCTTTACAATGGCTAGCATGCCTTAGTTCACCAAACAGGTCACACGCACTGAAAAAAC
AACAGGAGATCAAGCACAGGGACACAACGGCCATGGTTTTTTTAATGTTTTAGTTCGGTG
GTACAGACCAGCAAAGCCAGAAATGGAGACGTTCCGGGCATCGCTTATTGCAGGACCTGG
TGACGCTAGTCCGCTGTCCAGCTCTGCTCCACGACCTCACGCACCTTGCGGTTGTACTCG
CGCTTGTTCTCGCTGTACATTCTGGCTGCTTCGGAGTTGGCTGGAGAATTCGGATTCGGG
TCGCACAGCAGGGACTGCAGAGCAAACCACGACAGAAATAAGTAAACTAAGTTGAGTGTG
TGGATTCAGGGACAGATAACCAATGGCGCCCCAGGCCACTACTTTCAAAGTAAGTAAGGA
AAATAATCATTACATCCACAACGGAACAGAAGAAAGGCTGTATTTGGTAACTTGCTATTT
ATGATCAAACTTTAGGAAGCTGTGTCACTGGTAACTATTCATTGGTCGCATGTTACCTAT
AGGACAGGTGGTTGTTACACAATAAAAGTTGTCAATAAAATATGAATCTAGCCTCAGTGA
CAGTACTGGCCCTGTTTGGATCCATAGGCTAGAGTTAGTTTGAGCTAGTTGGGGCTCAAA
TAGCTCTAAAGTATCCAAACATGAGGGTTAGATTGGAGCTAGTT