Contig Data
morexGenes
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Map Locations of contig_1569993 (4487 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1569993

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15156 7 2203 bp MLOC_15156.6 Available Available LOC_Os12g19590.2, FRAME:+2, EVALUE:5e-37, 13112.m02079 protein WD domain, G-beta repeat domain containing protein, expressed





CDS Structure of MLOC_15156






Contig Sequence (4487 bp)

>contig_1569993 4487 assembly3_WGSMorex_rbca.fasta
TACTTCTACTGTGCTACATCACCCTTTCCTNNNNNNNNNNNNNNNNNNNGCAAGCTCAAG
AGGTAGCAAGAGGGCAGATTGAATCCGTGTCTCCCATGGATGACTCGCCGTCGGAGTTAA
CATGGTATTTTCTTTGATCACCGGCTCATCCGACAAGTTGACCCGTGCGTAAAGCCAACA
AAGGCACAATGCTATCTAACCTGATGCTTGGCGGGTTGGGCGAACCGAGCCTGCTCGATG
ATGTCGATGTAGGTGTCCGACTCGGGCCCGGAAGCTCCAATATTGCCGATGAACACAGGA
ATCTTGCTGAAGGGGACCCGATAACCAGATCCGATTGAACCGGCCTTAGGACCCCAGTGT
GAGTTGTCCATGTAGCACTTTCTGTGGTCAGTCTTAGTCATGAGACCAACTACGTAGCTG
CCAAACACTGGAAGGGCTCCCTTTAGAACTCAACTCCATCGTGCGTAGGCCCCACGGTGG
GTGCCAAGTGTCGTGGTTTTGTCACGACAGTTTTCCTCGTGATATGACTTAGTGATGGAG
CCATCGCACCTTGGTGGTGACCCAAAGGGGTTAAGCGGAAGCGAGAGTCGGGTTTTACCC
AGGTTCGGTCCCTCTGATGGAGGTAAAAGCCTACGTCCTGTTTTGTGTATATTGACGGTG
GAATCGATTACAAGGGTGCGTATTCGCCTGACCTAGCTCTCGATTGATTGTAACTTTAAG
TCTACCAGCCCCAGAGACTCGCCATTTATATGCAGGTCGAGGCCGTGAGTTTACAAGAGT
CTGGGTCACATTACAATTCGTGACCCGGTATGTTTCTAAACCGCCTTGTCTCTTGAACAA
GGAAACTATGACAAGTCATCTCCTTCATGGGCCTTGAGTCGCCATCTTCATGTCTTGGGC
CGCAACCGGCTCTTGTTAGAAAACACCCCGCACCTTCCGTGTCACGGGTTAAGGCCCAAC
TTTGAACATGACCTTTTGAGCTGTCATTAGCCTGACCCGGCCTCTTAGGGCGGGTCATAC
GGCGGGTAATATCCCCAACATGTAGAAATTTCTACTAACGCGAACCCTAGGTTTTGCTCC
TCCCTTCTCTCGTTGCCTCGCCCACCCCCACTCCCCCGTCTGCCACCTCCGCTACACACC
CGAAGGGTGAGAAGGCAAGGAGGAAGGGGAAGATGCTGGCGAGGCCCGGGCTCCGGTCCC
GGTCTGTCGTCTACCCCTATCCAACCCCGACCCAATCCAATGAAGTAGATTCCCCATCAA
GCAGCTGCCAGCGACCCCAATCCACCGCCGGCCAGCGACCCCAACCCCGGCCATGACTCC
ATCGTCGCGCCACCTCCCCTCCATGACTGGAGATCCACTCGAGCTCCTCCTCTCCAATCC
CTTCGCTGACGACGACACCCAACCCCACACCCACCGACGACTGTCTCCCCCAACCCCATC
ACCACCGAAGACCTTAGGTTTGACTCGCAGGCGGGCGGGGTGACAGCGCCCAAAACCGTA
GCTCCTCACCTACTCACCCATGGATGGATGGATGGATGGGGACGGGGCAATGACGCGGTG
GATCCACAGCCGCAACCACCTTCTCTCGATGGGGACCTCGACACCGACGAACACCACTTC
TACCTCGGACTCCATGATGTAATCTCTAGCGAGACTTCATCTCCGACCGTGAGAATCCCT
CCTAATCCTCCCTTCTCCTGTTTATTTCTTCATCTTTGATCTGATCTGATATGTGCAAGC
TGCTCCTGTTGCTGCTGCAGGTGGACAAGGAAGCCCTCGTCCCCATGGTTGTTGCTGCTT
CAAGTGGACAAGGAAACCCTGACGGTGACGGACGTGGTGAGCTCCATGCCTGTAGATCAG
ATTTGATTTGATACATGCAATTAATTCTTGTTTTGGACAGACACAACTTGGTCTTGATTG
TTGTTGTTGTGCAATTTGAATGAAAGAATGCACGTCCTGCTTCCATTCACTTTGAATGTG
TGTGCAATTTGAATTTCATGCTTTCTTGAGCATATAAAATCCTTCTTAGAGCATTCTTTG
TTTGAATCGTGTGTTTGCGTGTGTTGTGTGAAGCTTAGTTGGTTATTACATATTCCCACA
CTTGGAACTTGAAAACCCAAATTGTTTTAGCTTCACATAGAAGATAATCATATATATATA
TATAATTTAGAAGAAAAAAATCAGGTCGTATCCCACAACACTACATGGAACATAATTTCT
GCAATTGCCTTCTTGATTTCGAAACAAGTAGTCCGAAAAACAATTTGCTGAAAATTTAGG
TGAAACTAGTAGTCTAAACTGCTATAAGATTGTAGATATCAATGGAAGTTGTTGAACAAA
TCAATCAACTACATGTTGGATTTATGGATAGATGCTTGAAGGTTGTCTGAGCTCTGAAGC
TTTTATTGTTTGGTTTTGACCTTAGATGATTCAGTTCTCAATTTAATACTATATATGGCC
TTTGTGGAAGACTTTACAACTTTAAAATCCAAATTACTTCAGCCTGCTCATTTATACTTC
ACAAAGAAGATACCGATTTCTGCTATAGTTAGCCTGATGTAATTGCTTGGAATAAATTGT
GGACAAATTTCTACTATGACATTGATACATGTATATGCTCATTGTTCTTTCTTGGAGGTG
TGTGTTGATTAAAGGGTCTGCGTGATGGAGGTTGGCAACATAGACGATTCAACGATGAAG
GTGGAGACAGAGGCGAGCCATTCATAGGGCCGGTCTTCGGTTCCCTGACCCTGACCCCGG
GCGGCGTCGCCTCCTCGGCGAGGTAGTTGGGCCTCAAGAACAGCATCGAGACCAACTTCG
ACGACGACCATGTCTTTCAGATAGCTTCTTGGTAGGTTTGACAGCAGATTCTCTTCTATT
TACTTTGGTTTATATAGAATTTAATAGTTGTTGTTTCTAGCAACTTTTTCCTTCCCGTTG
CTCATAACTTAATGAACCTGTTGATAAAAATATATGCTACTTACTTGGTATATATATATT
TGTATCTAAATTAGTGTATCTTGTGACAAGCCAGGAGATCTCAACGCTCGATGTGTCTCC
GTCGACGAACGCACTGAAGTTCTATTCTCCAGCAACTAGACATTATCTGGGGGACTGCAC
AAGCCATACAGGGTCCATCCATGAAATTGCCTTTTCAGCTCTGTCGTTGCCGCAAGTGAC
ATGCTCTAGCTCTGGTGATGGCACCATCAGAGCCTGGGCCAGAAGAATCTTTAAGCAAGT
TCTTTGTCCTACTAGGTCTTGATTGTTGAATAAATATGTTGGTTGAACATAAATATTATG
TGAATGTGCGTGACTGCAAAATTTCGTTAGTACCATAGTCTCATCTACACATTTCCTTCT
TTAGTATATATATATATTAGAGTTCATCAGTATGTTTCTCAGTTTGTGCACTTTAGATAT
TTGTATTCGCATAAAGATGTGAGGCATTAATTGTTAATTCTTGTGATGCTTGGTTTGGAC
TGAGGTTGGCTCGTAACCATTAAAACTTAAACATGAGCTATCATATCTATTTGAGTTTGT
TTCTCTACTATATATCTGGTTTGTTCATAGAGCCACTTTTTTGGAGTGAGATGAGAATAA
GAATTTCACTTTTGTAATGTTTGCTTGTATAGACATGTGAAGGTTTCTTCTGCATTACCA
CTAGTTTTGATAGCCCCAGCTATGATTGTGTTTTTCGATACAAATGGTAGCTTCTGAGGA
GCTCTTGTTCTTGGGGGATGCACGTTGTTCGAACCCCTACTGCAGAAAATAGATATTATC
CTAAATATTTCGAAATGTTAGGATTTAATTAATTGCTTCTAGATAGTGCCCACCTCAAGT
TAAATCATGTCATAATATCAGGACCATTAGTTGGATTTAAGAACAAACAATCAAGATATG
CAACTCTAGAAACATCTGTAAGGTGCCATGTTTGATCAAAGAGTATCAGTATGAGCTTCA
CACACTGCAGAACCAACAATACTTTTTAACTAGGTGGATAACAAAAAGCATGGTACTAGC
TCAATTTGTGTTATCATTCTAAATAACTGTCCTTTCCTTGAATGGTTTGTTCATAATATA
TTTGCCTCGTTTTTCTGATTCTTCTTTGCCGATTCATGTAACAAGACGACCGAGGAAGGC
ATGTTGCCATTTTGTTTGTTCCTAGCCCTAACTATGGTCGTCCAACCAGTCTGGCATGTT
GTTCATTGATACTTCTCTAATGTATCTTTAATTTTTGATGGTTCCATTCTACTATCTTGC
CAGCTTTGGATGTTTTGTATGCATGAATATGCTATTTTTGGGNNNNNNNNNNNNNNNNNN
NNNNNNGTGCCAGTTTCTGCTTTTTCCGTGTTTTTGACCTTNNNNNNNNNNNNNNNNNNN
NNNGAGTCCAAACAAAATAAAACCTGCGAGGTGACTTTTTCCATAATAGAAGATACGCAG
GGGACTTGAGAGCAAGGCAAAGGACCTAGGGGGAGGTCACAAGCCCC