Contig Data
morexGenes
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Map Locations of contig_1569973 (2594 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1569973

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15145 4 2153 bp MLOC_15145.2 Available Available LOC_Os04g59340.1, FRAME:+3, EVALUE:1e-87, 13104.m06253 protein RNA-binding region RNP-1, putative, expressed





CDS Structure of MLOC_15145






Contig Sequence (2594 bp)

>contig_1569973 2594 assembly3_WGSMorex_rbca.fasta
GCAGGCAAGATTTTATTTTTTGCCTGTTTGATCCGAGCGATGTGATGTGCTGAGCCATGT
CCATGAACTTCTGCATGGCTTTCTAACTTTCCCTCCCGATGCTGCTTGAGTAGTTGCAGC
TGGGGTGGCTGCTTGCTCTCTTTGAGGTGTTGGTGCAATTCCAGGTTCCTATTAATGGAA
AATTTGGGCAACTGCACTTTCTTCAAAAGGGAAATCCTAAACTGAACCCGCATGCCGGCC
CCTGTTTCTGTTTCTGGACAAAGCCTTGAAATTTTTGGAGCCATATCCCTGCCCTTACAC
CCAGGAGATAGATGAATAACCCTCCACTGCTGATACTCGTCTTTTATGTTTGATAGTTTT
TTATATAAGTGTAAAAACTGTAGACGCTTTTGCTGCACGATGCTTGTTCTTATTCAGATG
ATGCCCTTACCGTGTTGTTTTTGGATGTTTGCCAGCTCGGTTTATTAATTTTTGATGTTT
GCCAGCTCTGTTTATAAATGTAAAACCTGTAGGTGCGTCTTTCACAGTGCTTATTCTTGA
TTATTCTGAGGAAATTTCAGCCTTACGAGTGACTGTTGCTATGCGTCGTTATTTCCCGCA
GAGGCTCCTATGGCGACATCCGACGAACAGGCTCAGAATGACCAACAGGATATGAAGGAC
GAGCAGCAGGCTCACAAGGACGAAGAACAGGCAGAGAAGGAGTACGCTGACTTCGAGGCG
AGGGTCAAGAGGACGATATACATCGATCACCTCTCCCCCCTGGTCACCTCCCAGGTCATC
AAGGCGTCTCTCGCCCAGTGCGCCAATGTCGTCAGCACCGACTTCATTCAGAACTACACG
ATCCAGTACGAGATCCCCGCCGCTGCGTTGGTGGAGGTGGACAACGAGTCGCAGGCCCGG
GCTGCTGTGGACCTGATGAACAACTTCCCGTTCATGATCGGCGGGATGCCCAGGCCTGTG
AGGGCTGTCTTTGCAAAGCCCGAGATGTTTTCGGACCGCCCTAGGAAGCCTGGCTTGAAG
ATTGAGTTTAGCTGGGTAAAGCAAGGGGATCCAGGGTATGATGGGATGAATAAGCTCAAG
GGCCTTATGAGGAGACAAGAAGCAGAAAACATGGCACTTATCAAGGTGAAGTGGTTGTTT
CTTTACTTCGTTATTGTTCTTATTTATTTGTAGGCCCACTAATAAAAAAAGCTGCAAATC
TTTTTGCTTTCCTTTACTTGTCTAGAATGAGACAAACCACTTGCTCAGGAACAGGAAATG
TCAAACATAAATTGAGAATCTTGATGCTGCTGCTGCTGCTGTTCTTTAAAATGTCATACA
GTTGCTTTAATTTAACCTCGTCTGTTTTGTATCCGAGCCGTAATTCCGTTGTTCTCTTCC
TTTCAGAATCAATTGGAAGAGGAGAAGGAGCTGGCGGTGCAGCAGCAGGAAACCCTGGAA
GCAAACAGCAACAAGTATGGCATGCTCGAGAACCTGATGAACAACGGGGACATCACTAAG
CTCGCCCAGCATTACAAGGTCAAGCTGGGGGATGACTGATGGGTTGCGGACGCTCAAGCC
CCTCCCCCGGAAGCCGCGGTCCGCGGTGAAGCAGATCCCCTTTTCTGCCCAGTCGTGCTT
GACCTTGTAATGACGGTGTGATGGTGCGGCGGCGATCATCCACTGGGTAGTTCTCGTCTT
TTGGTGAGGTTTAGTAATAAAGCATTGGTTTGCTTGGTGCAGCCGCGCTCTAGCTGTGGC
CGGCTGCGAAGTATCAGTTCCTCGGTGTAACAACTGCTGATACGTTCCGATCCTTCATGT
CAGCAAGATGATCCATCGACATCTGATACCGTCTGTGTGTCCTGTATTGCATGAAATTTG
CATATACTGTGGTTCTGTGGCTAGCTTGAGATGTTTTAGTTATGTTGGTCCTGAAGGTGT
GCTGTTGGTTGGAGCAGGAGGGAATCATATCTCTGCCTTGTGTTGCCCAGGACTGGACAA
AGTGTCAGTCACAAGTGCCAATGTTCCCAAATCTTGCAACACAGGTAGAAGGTGCTTCTC
AGATTATTTTTTTCTTACACTCTGTTGAGTTCAAATGCAGTGTAGACCTTGTTTCTAATG
TTGTCAGGTCAAGTCACGGTGAACCGCAGTGTAGACCTTGTCTCAAAAAAATCATACACT
GCCAATGCCATAAATTGTTTGTCTCTCTCAAGTTGTCGATTTGTCAGATTACTTGTGCTA
GAATTACTTGTCGCACAAATGAATGAAAATGGATATATGTAGAACTAAAATACATTTAGA
TACATCCATTTCTATGGCAAGTATTTCCATACGGAGGAAGTACATGAGATGCAAAGAACA
TGCTCTCGATGCCATGGTTTATAAGGAAAAAAAGGCATTCTTTTTGTTGCCGTGACAGGG
GATATGAGGCGCGTCCCTCGCGGGAGTCGGCAGCTATGGCCCTATCAATCCTTTGGAAGA
TTTGCGACTCAAGGAGCACGACTGATTTCAGGAAAGAATTTCATCCGCTTAAGAGGGTGT
TTGGTTAGGCTGTGGGCTGTGGAGAAGCTGCTGTGGGCTGTGGAAAAGCTGCTGTGTCAG
GAAAGCTGCTGTGA