Contig Data
morexGenes
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Map Locations of contig_1569959 (5052 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1569959

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15135 2 623 bp MLOC_15135.2 Available Available None





CDS Structure of MLOC_15135






Contig Sequence (5052 bp)

>contig_1569959 5052 assembly3_WGSMorex_rbca.fasta
TTGGTGTTACCAACCGGGACTGAAGGTCCTCCTGCTTGGGCGCCCCGTAGCGGCCACGTG
GAGCACCTTTGTCCCGGTTCGTAAGCCAGCCGGGACTGAAGATTTGGGCCTTAGTCCCGA
TTGTTTAGTCCCGGTTGGAGAACCAGGACTAAAGGTCCTCTGAAACTGGGAGTAATGGCC
CTTTTCCTACTAGTGAAGATGTGTATCAACACGACATGATGATATAGACACCTCATCACA
AAAACCTTGGGTAAAAAATCAACTAAAATCTTTTATTTCCTACGCAAACCATGGGACCAA
CATTAACAAGGCTAGATCATCTGAACAGGTATCTATACTATTAAAGAGGAGTTGGAGATT
GTACATTGTGCATTGGTATCTTTCTCTTAGTTGTGTTAAATAAGTGAGGTTCTTAAGTGA
AAATATATTTTTAGTTGAGTGAAATCAATAAACTAAGTTAAGTAGAATCAATGATTCATA
AACTAGTGAAATCTTTTTCTTTGAAATGAGAGAATTATATTGTTAAAAAAGTGAAATTAG
TATCTCTAATAATGAGTGGAATTATTATTTTTGAATTGAGTGAAATAAGTCTTGTTTACA
AGTGAGTTCTGTTTTTAATTGAATGAAATATGTAATTTAAAACTAGTAAAATTGGTCATT
TTAAAAATGAGTGAAATTATGTATTTGAGTTAAATGGAATAATTCTTTTGAAATGAGTGA
AATAAATGTTTTCGAAATGACACCAGTGTTTTGAATATTTTCACACTAGTTTTTTAATTA
AAATGTGAAATATCTCTTTAAGCAAGCAGTGAAATATCTTTCATGTATTTTTAGAATCAT
TAAAATATAATCGAACCTGGTTTTGTTTTAACGATCTCGTCGTTAGGAATTCAAATATGT
GAATTTTTTATAAATAGATTTTGTATTGAAAAGATATTAATGAATTAGTATCTCACAAGA
AAAATTAAAAGCTGGTTAATTTTTCAGTGGGTGGAGAGAGATAATCTGTGTGCACGCAGC
ACTCCGTCCTTCTCTACTTTTAATAGACACAAACTATATCATCATGGACACATATCGGAA
TGTATCATAATGTATTCTTACAGCAAAGTATTTGGTACCTTTATGCTAGGTAAGTACAAG
AGTAGAAAATGCTTACTACTGATAGGCAACTTAACTCAACAATGGATATATGGGCCACGA
CCGTCGTGCGTGTAAAGGGTCACGATGCAGCCATCGTCTTTCTTCTTTTCCTCCCTTTGT
TCCTTTTCTGATGAAGATTTGTTTGAAAGAACTACAGTATATATTAAAGATCGGATATAT
GAGCCGTCGGACTCGTCACTAACCGCGAACACGTGGTACTAATGTAGCTCTATTAACACG
TAAAGAGTACTGTCTACGTGCCAATCTTTGCGGTAATGTGGACGGCCAAATATTGAAGAA
CGGGGGATATCCGAACCTGACCACCAGCATGCGATCCGGTGCTTCTTTTCTTGGGACCGT
TTGATACAACATTATTTAGATCTTAAAAGCACTCGTCATGGTATGGCAAGCACCAACACT
TGTCGATGGATGCCTCAAGCCAAATTACTTTTGAGTATGCAACTGCCGAACATGGATTTC
AAAGCACGGTCTTTCGGATACCCTTATCTTTACCCTTCAATATTGCTTTAAGATCCATGA
TGTATATACAACTAACTTACAATACCAGATTTTCTCTTTTTTGTTTTTTTATTAGAAAAT
ATCCTTTTTAGTATTTATGATGCACGAAAAATCTGAAAGTTTGATCTCACATTCTAGTTA
GAATGTTTTGTTGTGCTGCAAAATTTAAAGTTCATATGTTATTTTATATAGAAAGAACAA
AAAAGATAAAAATGTTTGTACAAATGGCGATGCTGAAATAAGTGGCTAGATAATTAAGAG
GGTGTCCTGCCTATGCTTTCTCAAATGTTTACCTGCAACTGCCTGTGTCGCCACGACATG
AGGCCTCCACCGACCCTGTCCGTCTTTGGATGTCACGTTGCCACGCAGATGCCGCGTTGG
ACTTTGACTGTAGGATGGCAACGGTAAAAGATGCTTGAAATGTGATTTTGCCATGGGCTA
ATCCTTGTGTAAAGTGGATTTTTCCCGTCAGCTAACCGTGAGTGCGCATGGGTGGTGGCA
GGCCTGGCTGTCGTTGCCGTCGCCGTCGGAGTCCCATCCATTCGGCGAGCTTATAAAACT
GCTGTTGAGGAGCTCCATTCTTGCAAACCATCCATCTAAGATCAGGAGCAATCTTGTCAA
GAGCAGCAGAGTAGTGTTTAATCACTCATCAAGGACCGATGGCGTTTCTGGGAGGATCAT
TGCGGAAGATGATGGAGGGGAAGAAGAGCCACGACGGTTCAGGCTTGTGGCGGCAGGCGC
CAGCGACCGTGAGGCAGCTGTTCTGGAGGGTGAGGTGCGCCATGGTGCGGCCGAAGCGCC
CCGCCGTAAGTTTCGGGTACGACCTCAAGAGTTACTCGCAGAACTTCGACGACGGCCTTG
TCCCTGTCCGTCACCTCTAGCGACATCCGCATGGTCTTCTTCTTCTTCTTCTTCNNNNNN
NNNNNNTTCTTCTTCTTCTTCTTCTCATCAATTTGACTTGCCGCCCAGCCAGACCACGGG
CTCGAGGCTGGAGAGTTTGAAGTGTCGTCACCTTGTAATTTGCTCCTCTAGCTCAGCTAC
CAGTGTACTAGTATTAGAGAAGTACTGTTTGTACAAGTTGCTTAGTGTTGAAAGTACTCA
AACTATCAATGAAATGACAGTGTATGTATGTGCTTCGAACTAGCCTCTAAGCCGTCACTT
GCCCCGATGGAATGGGATTTAAACTACCTCTATTTATGTCACGCTAGAATGCACTCTCTC
GCTGCTGCTGTCATTTTATTCTCGAGATGAAACCACTTGAGTATAATTGTTTCTGTTTAT
GCTAGCAAAGATGTTTGGATTAAATATATTTTTATCGTCCATTGTTTTTTAGATCTTACC
ACATTCATTGTTACAGAACAGGCAAAATTTAACATGCTCCCTCTTACCCCCTCTTTTTAC
ATGTGAGGTAAGAGGGTAAGACTTAATCAGAGCACTAATTAATGAAATCAATTACTCGAA
TCTATTATCTACTCTTACCTCTCATGTAAAAATAGGGGGTAAGAGGGAGCATGGTAAAAC
TGCTCTACAGAATATGTATACTCGTACTATTCCCTCCATAGATAAGCTAGAAGACCGGTC
ATCATAGATTTATCTTTTTGAACAGTCACGATAGAGAAATCCCCACCTGAATTTGCCCTC
ATACAATTTTTTTATCATGTTTATAAGGTAAACCGTATTAAAATCTTGATAAGTTGGCCC
TGTTTATAAGAGAAACCAGGCCGAAAACTGTACAAGCAAATCCGGGGCAAGGCACTCTAA
CTAGCAGAGAAGGATCATCGCGATGAAAGGCACTCATAGATGTGGGGTGTCATCGAGAGA
TCAGAATACTAAGACTTTAAGCGGTGTAATGCATCACACCGATATCCCCACGGTACAACC
CAGTAGTGTCCACAATCAACGAGTGTCACTAAACATGAACCTTGACCGAAAGCTCTGCCA
AGACAATTCAAAACGATTAACAAGTTGGGGAGGCATCTTGCACCATCAATGAGCAAAGAC
GAATCGAGACATCACCAAGAACATGGAGCTCGCCACGACACATCGACAAACATAGGAGGG
TTTTGAGCCTGCACAACAACATGGGCGGACACCATCATGAGGGGGAAACAGATGGCCGCC
CTGCGCACCCGAAGGCACCGCCGTTGAACCCTAAAGAAAACCACCAAACAAACATTGTCT
ACCTCGAGCCGGCTGCACGACCACCACCGTCAAACCAACATTGTTCCCTCCGGCTGATCC
CTACTCAAAAAATATTGTCCACAAGAGGGGAATAACGCAGGCACCGCCATCATTTGATTC
AAGAGAGCACGGATCTAAGGTTTCCCTTGGAGCAACGGACTATAGGGCATAGGCACACAT
TACCATAGCATCACCCTCAAGAAGGCAACGATACCCACGAACGTCGCCGCTGCCGGCACC
GGCTATAACCAGAAACGGACTTTTGCCCAACACCATTGCCCAACATTGTCACCTATGCCT
CTAGCCAGACCAGCGGTCCGCCACGTTTACCAGCCTTCATCAAGGCTAGCCGCCACCAAT
CTCCGCCTGATCTGCATAGTCTAGCTCTCAGAAGTGAGTCAACACCTGGTTGCTGAGCAG
CAGCCACCTCCGCACCCCGAGATGCTAGATTGGAACGGCACTGCACCTAAATCATCGACC
CACCTAGTCAACGAGCAACAAATACAAAAACAACCGCTCATAACCAGGCTTGCCAAGCCC
GCACTACACGACACTCCATGTGATGAGCGGCAGGCGATCCCCGTTATTGCCCAACTAGAT
CCGGGTCAGACGCCCGTGCCCCAACATCATTTCTGGCTGATCCTGGCACCACCGCACGCG
GCACCACACCCCCACCGCACCACGACAACGACAGTAACACCGGCCGCTAGAGGATCCCGC
ATGACCCCAACCAACATCAGCCAAAGGCTTCAAGCAACAATCAGGCACTTCCATGCCGAC
CTCCAAATCTAGGGAAGACTCCACAAATCCATGATGCCGTGTGGCCAAGCTCTCGCAGCA
GCGCACCATCGAGCATCAACACCAGCGTAGTTGCAACCTCCCTGTCCACCGGCGGTACTG
ACGTCGCACCTTGTTCCACCGCCGGCCAAACGTGAACCAACGGAATATCCAAAGCAATGA
CCCACGCCCACAACCATCATCGTCCACCACCACCTTAGACCTATGCGATACACGTCGTGG
GAGCGTCGCGTTGTCGGCCACCACCGAGCTCCTACTCGAGGGGTCGTGTTTGATAGATCC
CATGGATCTTAGGCTAGATGTGTTCGGTGTGATGTGGAGATTTTATTACCTTGTAGCTTC
TCGATGAGCTCCCTCCGGTCGTCCATGGTGAGGACAACGGTGGGGAAGGAGAGGGAGATC
CGGTGGCGGCGG