| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_1569771
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_15081 |
2 |
2800 bp |
MLOC_15081.1 |
Available |
Available |
LOC_Os02g56100.1, FRAME:-2, EVALUE:0.0, 13102.m06442 protein ribonucleoside-diphosphate reductase large subunit, putative, expressed |
CDS Structure of MLOC_15081
Contig Sequence (5835 bp)
>contig_1569771 5835 assembly3_WGSMorex_rbca.fasta
AAGTTATTACGGGTAATACAACATCATAAATAGCTTGCAAGCATGTGACTAATGAGTTTA
GTCACGGTATCTTGTATTACAAAACAAGTAAAGAGATTTGCCAATAACAAGATTAAACTA
GGTATGAAAATACCGATGATCGACAATCCTACTTTGTGTATTAGTGGCACGAACGAATAT
TGTTCGGAGTCTCAGATAACATCCCGGACATCACGAGGAGATGCGAGTCAAGGATAAACT
TGCAACCGAGACAAATACACAAAGCTACAACACAAGTTGCAAATTAAGAATGTACTTGCT
CTGAGACAAATAGAAAAACATTAATCCTAGTGCTTAAATTCACCGGCTAGAAATTTAGAT
TGAGATAATATATTGCATCTAGATGTGAAATAGAATCCTATTTATTTTATCCCTTTAATG
ATTTTTGCAAGCACAAAATCACACCAAAAGTTCAAAAAAAACATACCTAGGACAATTTTA
TAAATTCAGAATACAAGATACTGTTCAATCACAGCCTTGTTTTTTGCCTTAAAAGCTACT
GGAATTCTTCAAGTTGGACAGCACAGAATAACTTCTGGACAGTACAAGAACGAAGATAAG
TGTTTCAGGCATATATTATACACTTAGATATATAGGTGGCATATATATATACACGCGCAA
TAGCATAGTGCGCAGAGGTTCCGGAGCAAGGCTTGCTTTTAATTCAGAGTTCATCATGCA
TAGACAGATTACCACTACAGATATAGCATCGAATCGAATGACAAGCCAACAGTAAGAGGA
TAGTATAGGTTAGCGTAGGGTGCCGCGGACGAATCTAGCTTCCACATGCCAGGCAGTCCT
CCCGGTTGTTCAGGGAGCAGGTCACCTGCGCCATCTTGGCCTCGAGATCCTCTTCCTCCT
CGGCATTGGCAGGCTTCTTATCCTGCATGTTCGGTGTCGCTCAAGGTAAGGTAAGGATCA
TGCCGAAGCAGTTGAGTGAAGAAAAATATGGTTCTGCAATTCGGTGAAGTGTTCACCTTG
AGAAGACTAGTGTCCACTGTGAATTTGATCGCATCCGCAGCAGCCCGTGTCCTCAGATAG
TACATCCCAGTTTTCAGGCCCTGGCACACGAAGGAACAACGAAGCAGTGGCATAAAGAAC
AGTGTTATATCATGCAAAATTACAAGCTCAACGCTGAGTGCTGAACTTTTCAGTAAAATC
GCATAGTGCTAGAACAGTATTGAAATTAACAAGCAAACCTTGGACCATGTGTGGAAGTGC
AGGGAAGTTAGCTTCCCGGAGTTGGCTTGATCCATGTGGATATTAAGGCTCTGACTTTGA
TCGATATAGCAGCCACGGTCCACAGCCATGTCCACAACAGTTTTCTGCTTGATCTCCCAA
ACAGTCCTGGTTCAATGATAAAGAAAAGTTAGAAACGTATGAACCGACACCTTGTGAAAC
TAAAGCATGGGATGATCTTATTTCACATACTTGTAAATTGCTTTCAGATCATCTGGGATC
TCAGTGATCTTTTGGACAGAGCCATCGTCATAGATAATATTGTTTTTCAGGACAGGAGAC
CAGATACCCATCTCGGTCAGATCATGGAGGAGATGCTTGTTCACTACAACAAACTCACCA
CTGCCAAGAGAAAAATAATTGTGTTGCATCTAAGAATGGAAAAGTCAACAGCTCGGAACT
ACAAGGAGCAGATATGCAAACCTTAGGACTCTTCGACTGTAAATGTTTGACGTGTATGGT
TCAAAGCACTCGTTGTTGCCAAGAATTTGACTAGTAGAAGCAGTGGGCATTGGAGCCACC
AGAAGAGAGTTCCTTAATCCAACTTTGGAAATCATCCCCCTTATTGCTGGCCAGTCCCAT
CTGTCTGATGGCACTACATTCCACATATCAGGTTGAAGAATGCCCTGAACAAAAGTGTAT
TGAGGAGAACCTTAGAAATAATATTGGCTGCTAAAATGCTATTAAGGAACAAAAGGACCC
CATTCAAGAAACAATATCATCGTGTGAATACACTTATTGCACTAGCACAAGCACAAGTTT
TCAGTTAAGTGGTTAATTAAGCTCAACCTGATGGGAACAGCAGTGCTGAGAAGAGCCTAT
CTCACAGGTATAATTGTTTAATTCTTCAAAGTTGTAAGTAAATCATGCTAAAACTGCATC
TCCTTAAATAACTTACCACTAATGGTGAGCACAGAAATAATTTTATTGTTTTCTACCATC
AATTAAAGTTTATGTGACAAAATGTGTAGTTCAACATAATCACACCATATATTCAGCACA
AATGACAGGTGTATTTACAGACATGAAACAAACCTTGCTGACTGGGCACCCATCATAAGT
TTCATAAGGACCTTCTTTTGCAGCAATTTCAGCAGAAGCTTTCAATGCATGATAGTAGAT
AGTCTCAAAGATATCCTTGTTTAACTGCTGGGCCTGAGAAACAATTCCATTATAATGAGT
ATCAGTTAAGTACAAAATGAAATGACCATACTTGAATTAGCTTGAAAATGTACCTCTGGT
GAATCAAATGGCATGCCAAGTAAAATGAAAGTGTCTGCTAAGCCTTGAACACCTATTCCA
ATTGGCCTGTGCCTCATATTTGACGTCCTTGCTGTCTCAATAGGGTAGTAGTTGATATCA
ATAATTTTGTTGAGATTCCAAGTAACAACTGAAGTAATCTGTCATATATTCAACAGTTTG
TTAGTTAGAACTCAGACTAATGGTACAGGATCCCACAATAAAGATGAGCCAGACAAACCT
CAGCTAATTTATCAAAATCGAAATATCTATTTTTTGACCCAATGCTGCCAACAAGCTTAG
CTGGATGGGACTCTATCGGAACACCCTGAAACATCAAATGTACAGGGTCAAGTAATGCAC
ACACGTTGCCAGGTTACAACCGCTAACGAAGAAGCTCAGCAGCCATCAGCACATACCTTT
TCTCTTACAAAACGTGGCAAAGCAATTGATGCCAGATTGCACACAGCAGTTTCAGTGGGA
CTTGTGAACTCAACTATCTCTGTGCACAAGTTGGAAGACTTAATTGTGCCCAGATTTTGT
TGATTACTTTTTCTGTTGCAACTGTCCTGCACATCATCATCATCAAGGACTTTTTAAGCC
AAACCATTGGAAGAGAAAGAAGTGTTCAGGGACTTGCAAAATTTAGACAAACCTTGTAAA
GCATATATGGTGTTCCAGTTTCTATCTGTGCCTTCAAAATTTCAAACCAAAGGGACTGTG
CTGAAACAATTTTCTTGGCTTTGCCCTGAAATCACGCAGCTATGTTATTACATGTTTTGT
CACTTCAAGATATATGTACCATCTAGTTCAGCTTACTTCTCTTTCATATTTATTGTACAG
ATTCTGAAACTCATCTCCCCAGCAATCAGCCAAACCTGGAGCTTCACTGGGACAAAATAA
TGACCATTGCTCATTTTTTTGCACCCTTTCCATGAATAAATCAGGAATCCAGAGAGCATA
GAAAAGGTCCCTGGCACGATTCTCCTCCTGTAAATTACACATATTGAGGGTGAGATGGGG
CAGTACAAGATAATAGCATGAGGGTCATGACCAAATGCCAAAAAAAGTAAATCCAAACTG
GTAATCAGTTTCTAGTATCTCTGCCTGAAAGTGTTACATGTTACTTCAAGTCATTCAAGA
ACGTTTACCTTTCCATGGTTCTTTCTCAAATCAAGGAACTCATAAATATCAGCATGCCAA
GGCTCCAAGTATATAGCAAATGCACCTATAAAAATAGGAATCTGTGAGAAATCCTTAAGA
ATATGCAAACTGGGTGGGACTAACTGAGTAACTGATGATATTTACCTTTTCTCTTGCCTC
CACCTTGATCAACATAGCGTGCAGTGTCATTGAAAACACGTAGCATGGGAACAATTCCAT
TAGAAGTTCCATTTGTTCCACGAATGTAACTGCCAGTAGCCCGGACGTTGTGAATTGAAA
CACCAATCCCTCCAGCTGATTTGCTTATGGAAGCACATTCCGAGAGAGTATCATAAATTC
CCTCAATACTATCGTCTTTCATGCAGACAAGAAAGCAGCTGCTTAACTGCATCACAAATA
ATAGGAATATGAATACACAGCTTAACCATCAATATTGAATTGTTTTATGGTAGAAGGTGC
AGTACTTGAGGCCTTGGAGTGCCAGCATTGAAAAGGGTTGGGGAAGCATGAGTAAACCAG
CGCTGAGACATCATGTGGTATGTTTTGACAGCAGACTCAATATCATCCTTGTGTATCCCA
ACAGAAACCCTCATTAACATATGTTGCGGTCTTTCCACAACTTTCCCACCAACTTTCAGT
AGATAGGACCTCTCAAGCGTCTTAAACCCAAAGAAATCATAGTCAAAGTCTCTATCATAA
ATTATCTCACTGTCCAGGCGTGTAGCATTCTGAAATGATACAGCAATCAGAAATTCCATA
AGCATATATATTCTGTTTTTTCAGAAAAGTAATTTTGTATTTCAATGAACAGCACAAATA
AACCAATATGAAATGAAGCATCTGAAAACTATCAATGCACAAGACGGAGAACAATGTAAC
AAAATGGTCTAATTAAGGACAAAATCATCAAACAACTAAAACGAAAAAACAGTAAGTACA
ACATTGCAAATTGCAACACAACACATGAACAACCAGCTACTCATGTAAGTGCAGACTCAC
TAGCTAACCAATTCACATGTGTGCCAGAGTGCCAGGCGATCATGTTTAGCATGTTACAAG
CGGTGGCATTCTGAAATAATACAGCACTCAGAATTTCCATAAGTAACATTGTACATCTGT
TTTTTTAGAGAAGTAACACTACTGCATATCAGTTAACAACACAGATACTCGCATATGAAC
TGAAGCATCTAAAAGATTAAAACTATCAATGCACAAGACATGGAACAATGTAACAAAAGA
GTCGGATTAAGGACAGACTCATCAACAAACCAAAATGAATAATAAGTACAGCAAAAGGCA
TTGCAAATTGCAACACTAACATGAAGATAGACGGCTACTTATGTCAGTGCGACCATAATA
ACTAGCCAAATCCCGACAGTGCCAGAGTGCCAGGTGGTCATGTTTAGCATCTTACATCTA
CAATCTCCTTAGTTACGATATGTAGTCAAACGACTCAGGCCATCTAAATGACAGGAATAG
AGCATGTTCCCACAGAAGACACGGTTAGCATCTAGACCGCACCTTCATGATGATCTCGTA
GACATCATCTGCGATCAGGGGAGCCATCAACCCAGACCTCTCGTTGAAATGTGTGTACAT
GACCTTCACCCTGCACACGGAGAGCAACACTGATCATCAGTCAGAGAAAGGGGGGGGATG
AAACGTATCATCAGGAATTTCGTCCTGTACACGAGAAAGAAGGGAAGGCGCGTACGTCTC
TGAGAAGGACTTCATGGTGTTCTTGTGCAGGTTGGAGACGGCGATCCTGGCCGCGAGCTG
CACGGCGCGAAGGAGCGGCAGGACCACTTATATAGTTAACAATCATCGAGGCGGCTGGGC
ATGGGATGGGGAGAGAGGAGTGGGAGTGGGGTACCGATGCGTAGTCGGGGTGGGAGGCGG
TCATGGCGGCGGCGGTCTCGGCGGCGAGCTCGTCGAGCTGGGAGGTGGTGACGCCCCTGT
AGACGCCGGCGCAGACCTTCTGGGCGACGAGGACCGGGTCGCAGTGGTCCTGGCTGAGGC
CGTAGGCGAGCTTCTTGAGCCGCGCCGTGATCTTGTCGAAGTGGACCGCCTCCTGCCGCC
CGTCGCGCTTCACCACGTACATCGCGCCGCCCGGCCCCCCCCCCCCCCCCCCTCCTCAAT
CTCTCTCTCTCTCTC
