Contig Data
morexGenes
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Map Locations of contig_1569752 (4614 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1569752

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15072 3 1106 bp MLOC_15072.2 Available Available LOC_Os04g08320.1, FRAME:+1, EVALUE:5e-167, 13104.m00749 protein YIF1B, putative, expressed
MLOC_15073 3 1922 bp MLOC_15073.1 Available Available None





CDS Structure of MLOC_15072






CDS Structure of MLOC_15073






Contig Sequence (4614 bp)

>contig_1569752 4614 assembly3_WGSMorex_rbca.fasta
CTCCTCCTCCTCCTCCTCCTCCCAAGCACCGCCGCCGCCACCGCCGTCGTTCCAGGACAA
GACAAGAGGAGAAAGAGTGAGTCTTGCTGTCCTCGTCCTCATCTTTTTCTTCCTTTCTTG
CCGTGAGCGAATCGGGATCCGGAAAGCCCTCCTCTTCTCCGGTTATCCACGGACCGATAA
TACTAGTAGTATGACGAGCCTGCGATTCGATTCGTTTCGATTCGATTCATCAGCCTTGTT
GCCAGCGATTCGATTGGATCGGGTATTCATTTTTCCTTGTCCACGATTCATTCCCTTGTT
TGTAACAGAAACAAGACTCACTAGCAGCATCCAACATAACCTCTGTTTCCCCCCTCATAC
AGTAGCACCTTCTCCTATATAGAGTATGCTATTGTTATGTGCAAAGTTTGTTTCGGTTAA
ATTTCCGGTGCACGCGAATATATCTATATAATTGTCATCAATTCTTCTTCCTTGTCTGCA
GCCATGTATGATAACTACAGAAATCCTCATCCTCCCGGGATGCAGATGCCCCCACCAAAC
ACTCAGCCTGGCCCTTACGACAATCCATTGTATGGCGCAAGCTCGGGTCTCATCAAAACT
GGGTTAGGAGTCTACGGGGAGAAGTTCCTCGGCTCAAGTTCAGAATTCATGCACAGCAAT
GTAAGGAGCCTCCAAACAACCTTTGATCCCCCGGGCCGGCTGTTTTATTTAATTATTTAT
TGGCTCTACAACTCTTGCAGATCAGTAGGTACTTCTCCAACCCACAGTACTACTTCCATG
TGAATGATCAGTATGTCAGGAACAAGTTGAAAGTCATACTGTTTCCGTTCCTTCACAGGG
TATGTATGTTGCTTGTCTTTCCCCAGCTGCACCTTTCTTGATATACTTCTGCTTCTTCCG
TCCATCTATTTGGTTTACTGAAATCAAGTCTTTGCAACGGCATTTCAGGGGCACTGGACA
CGGATAAGCGAGCCTGTAGGTGGCCGGCTGTCGTACAAACCTCCAATGTACGACATAAAT
GCGCCAGATCTGTACATCCCTTTCATGGCGTTCGGTACCTTCATAATTCTCGCAGGCTTC
ACACTAGGCTTCATGGGGAAGTGAGTTTTCCCTTCTTCCTTTTTAACTCTCTCCAGCCAC
AAAACAGTGAGGCTTCGAATCTGCCGTTACTAACGCACTTGATATCGATATGCAGGTTCA
CTCCAGAAGCGATAAATCTCCAGTTCACAAGAGGGCTGATCGGATGGGGCCTACAGATCG
TGTTCCTGAAGGGGCTCCTCTACTCGATGGGCGGGGGTGAGGTGCCGCTGCTCGACCTGG
TGGCCTACAGCGGGTACCTGTTTGCGGGGCTATCACTAGCCATCGTCGCTCGGCTCCTGT
GGGCATACTCGTACTACGTGATGATGCCGTGGATGAGCCTGTGCATGGGGATCTTCCTGG
TGAGGACGATGAAGCGGGTGATATTCACGGAGATGCGGGGCAGCGAGAGGCACTCGACGC
GGCAGCACTACTTCCTGCTCTTCATGGCCATCGTGCAGTTCCCCCTCTTCTTCTGGCTCG
GCAGCATAGGCGCATGAGACGGGTAGTCTTGTCTGTAATTTTGGCACTAGAAAAAACAGC
CACCTGTGAAGCTTAGGCGCATTCGGTATAGCATATCCAGTAGCCTGTGCAGGCTCTCTG
AGCATCATCATATATGTTTTATTGACAGGGTTTTGTGTTTGGCTTTGTATAAAGTTGTGA
ATTTTGCAGTTGGTCACCATTTTGTAGAATGTTTGTTGGAATAGTCTCATTAGTTATATG
CATATTTATAGTTTCTGTTATACATGTTTCTGTGTATGTTGTTTCTAAAGTATAAATGTT
TCTCTGTATGTTGTTGGACCTATCACAATTCATTCGATTACACCAGGAAAGACTGTGATT
TACTTCAGCTTGGCATATACTATGTTGCACAAAATAAACCACACAAGTATGCATATTATT
TCTTTCATGTACATATAATCTTTGTATTTTGTTGCTTCCACCATTCATTCATTCTCCCTT
AACTTATTTCCTTTGGATTTTTGGTGATGTGCGCGGATTTATACACTTCAAAAGCAGTCA
GTTTGAGTGATTTTGTGTTTGGTTATGTAAAGCTGTGAATTTTGCAGGATGTTTGTTGGA
ATAGCCTCAAGTCTATTCATATTTACTGTTTATGTTATTTATGTTTCTTTTATATGGTGT
TGGATCTACCCTAATTCACTCATCCTACTTAACTAGCATTATTTGAATGCTTGGTCATAC
CATATGGATTTGCGCTGATAAAGACAGTCAGCTTGAGTCTGCCATTTGGGACTATATGTT
TCACAAAATTCACCACATAAGTATGCAAATTTATATGTCATATACATATACGATTTTTGT
ATTTTGTTGATTCCACCATTCATTCATCCTCTTTCTTTGAATTTTTGGTGAGGTGTGCTA
ATTTATGCTTACAAAGCAGACAGTTGACATACTGAAACATCTCCTGGTCAACAGAGAATT
TGTTTCAGTGCCAAAGATGATCCATGTTGGTTTTCAAGGCGCCGCGGATTCTATTCATTT
AATACTTGATAATTGTTCTAAAGTCAAAGTCCTTTCATCAAGTCAGCAACAGGTGAACAA
TTGCTGCACAAAAAGGTTCTGTTGATGTATAAATTCTCAGCCACCAAAGACACGAGCAAA
ACCATTGCTTAAGAGGGAATACAGAAACAAAATAGATTCCAGGTTTCATGTCGCAAACAC
GAGAACAAATGCGGTTATCATGGATTTCATTTCACAGCATGGAGTTGCACATTCCAACAT
CCATTTGTCAAAATGTAGTAGATAGAAACTTCAAAGGGCGCGCCGTTCGTATTAATAAAG
AGTACAAAGGTACGACGACTATGAGGACAAGAGCAAGAAGAAACTTTGGCATCTCACAGG
CCTGGCAACAAGCAAATACCCTGTCAAACTTAATATTATTACAACTAGAGACCCCTTTCG
TCACTGTCGCAAATCATATTGGCACGGCCATCTTCTTCTTGGTTATAATGACTCCAGGGT
GATCTGTGAAGACTCATCAGAGATTGTATCAACGAAGAACACCACAAACAGACCCACCAG
TCCAGGAATTCGGATCATCAACTGACAACAAAACAGAGCCTTGGTTAGCAACAAAAGACG
TAACGATTCACAGAAGGCAACGGACATCAGGAATTATCATCTCTAATATATATTCTGTCA
TCAAGACGATATCAGTGTGATCTAATATAATAGAAACATAAGAAAGAAGGTAGTAGTATA
TCTATCATATTGCTTTTTACGTACTTGATAGCTTGTTAAAGGAAATAGTCTGAACAGTTA
GGACACTGTTACAGGTTAAGGACCTAGGTAAACTGTATGTATGTTTCCCACATAGAAGAC
TTGTATGATACTAACAATGATGAGATACAAAAATGTTAATACAAGAAGGTTCCCATATGA
TACTAACAATGATGATATGTTAACAATTTTAATGACAAGAACCAATTTACTGACTGCATA
AAAAGTTAAGAAAATGATACTACGGAGTATTCCACTGTAAATATAAACATGACAGCAAAC
ATGTTGCATTAGATAGAGATGAGAATTGGATGTCCTAATGTTGCAAAAGAAAGAAACTTG
GCACACTGCCGGTGTAAAGTGTAAACTAACTTGATATCTAAGGTGCTGAAATAGCCTCCA
CCACTTTTAGGCAGACTAACCACTCACATCATACAAATTGGGTAAGAATCCCACTTTATG
TACCACATAAACTGTAAAAGGATAATAACCATTTCAGGATCCGTACTACCTTCAAAAAGT
AGCAACAAAAAAAAACTCTCATTACCCATACTAAATTCATTCCAAGTTCAGCAAAATCAG
TGGTTGCTATGAATATTTAACAGTCACTGTTTCGTAGTTCATACTCAACCAAAGTGAAAT
CTGAATCAAATCCTACTTTGCTCTAAATGGATGTATATTTGCTGTCTGCTATGCAATATT
GAGCATGGGTAAAAATAGCAACGAAAAGTTACCTCATTATCCGTACTAAGGTCATGCTAT
ATGAAGCAAAATCAGTGACCGATGTGGATATTTAATATGTAATTCATACTATAACCAAAG
CTGTATCTCACAAGTCACAATTTCGTAAGTAATTAGCTATCCCAACAGTTCTTCTAGTTC
TACTGCTCATTTTAAACATGCCACACAACATCTCTATAAAATTTAAACAAAAAACTATGC
CCGCTAGCTGGGGGAGATGCTGGGCCATGATGAAGGAATAAACTGCCCAGGAAACATAAC
AGGGAGTCCAATCAGTCTTCAGGCCCATGACCGAGCAAGAAAAAACAGAAACAGTACCTT
ACTGCACAAGATAAATTTTGCTAGTGCTGTTCTAAGGAACACGATGCTAAGCGTCAAAGA
AATTTGAATCATTATTCATGCTAAGCCAAAGTGAAATCTGAATCAAATCCAATTTGCTGT
TTTTTATGCAATAATGGACGTCAATAAAAATAGCATCAAAAAATTAACTCATTATCTGTA
CTATTTAATACTCCCTCCGTCCCCCACATCTTTTCTTTTTTTTTTTTTTAAAAT