Map Locations of contig_1569647 (9318 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1569647

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15026 2 2254 bp AK366097 Available Available None
MLOC_15027 3 2450 bp MLOC_15027.2 Available Available LOC_Os12g38920.2, FRAME:-3, EVALUE:0.0, 13112.m04023 protein heparanase-like protein precursor, putative, expressed





CDS Structure of MLOC_15026






CDS Structure of MLOC_15027






Contig Sequence (9318 bp)

>contig_1569647 9318 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCGCCACTTGTGCCAAGAGGTCCTGGGTTCGCCGCAGCCTCTAGGC
TTGCCTCATATAATCCTTCCCCAGATCCCACCTGGTGTGGTAGCTTCAAGAACTGGGTCT
GTCCTTAAGCCATGAATGATAGCTATATGCAACGACCCTCGTTTTCTATGTTACAGGAAT
CATTGATATCTTGCGCTGATGTTTAGATTTGGGAACCGCTACAGAGAACCTTTGTTAGCT
AAGTAGAACTCTGAAATCCTGTTTTTCTGAAACCTTAGTTCTTTGTATCCCAGAGGAATG
CTACCATCGTTTCTGAAAAATCAGGAGTTCGCTCTAAATGTTATGTCCAGAGAAAATGGA
CCCGTTATGTCTATGGGCCTATTATCTTAGGCATCCCAATGGCTTTGTATGTCCCATTTT
AAGCTTTTCTTCTGTTCTATTGTTTAATTTACTTGAATAGGATACCTATGTTATTTACTA
TCATACCTCGACTACGATTATTTTATTTTACGTACTTCCACCCTCATTATTTAGCCGTCT
TCTCAAACATGATTTTTCTTCAATGCTTAACTTATTCACGATTGTATAATTTGTCCAGTC
AATCACTTGCTACAAATTCGTCACTGATTGTTATCATTTACCAGATTGTCTGGGCAGACG
GTTAGGTCCACGTCTTCTCGGTAGGGGTGAAGATGGCTCCATGGTATTAACATCTGCTTT
GCACTTTCCTTTAATCCTTTTGATGTTTTATTTAGTTTTTAATCGATCGCTGCACTCGAA
TGTGCAGAGGCTTGTAAGGGATCTGTATAGGATGCTTGATGAAATAAACTCGGAGGATGT
TCCTGTTGATCTAAAAGTGGCAGAATCTTTTGATGATTTCATCTGGGATACAAAGAATAA
TGATTATGATTTGAAGTCATTTGCTTTGAGGCTGAAGGCCACGGTAAGAATTGATGCTTA
CAAATGTTGTGTAGTGATCACCTAAAGTTGTCAAACGCAAAGAACATCACTGATGCAATT
AGTGATCAGTAACTTAAAGTTTTACCTTTCATCCACTCCTCTTTGTTCAGCAAGTTGCAA
ACCTTATTGTTTACATAATGACATGCAGATGGAGACCATGGATAAGGAACTGAGATCATC
CAGGTTATCAGAGCAGCTAAACAAGCATTATGCAGCAATCGCAATTCCTAAAGGCCTTTA
CTGCCTTTCATTGCGTCTAACTGACGTATACTCCTCAAATGCCCTTGCGAGGAAACAACT
GCCACCCCCTGAGTTGGTCCCGCGTCTTTCCGACAACTCCTATTTCCACTTTGTTTTGGC
GTCAGACAACATCCTTGCAGCTTCGGTTGTGGTCAGATCAACAGTTAGATCTGCATTGAA
GCCTGAGAGGATAGTCTTTCATGTCATTACTGACAAGAAGACCTATCCTGCCATGCATTC
ATGGTTTGCATTGAATCCTCTTTATCCTGCCATTATTGAGGTGAAGGGTGTCCACCAATT
TGAATGGTTGACGAAAGAAAATGGTCCAGTTCTTGAAGCTATAGAAATTCAGCACATTGC
CAGAAGCCGTTACCATGGAAATCACCTTGCAAGAACCACTGCAGGTGACAGCCCAAGAGT
TTTTGCAGCCAAGCTGCAGGCAGGAAGTCCAACATATACCTCTGTGCTCAATCATATTCG
TATATACTTGCCTGAGGTATAAGAACTTTCTTCTAACTATCTTCTGAAAAAATTAACATG
TATAAAATGCGATACAACAATGTGGTGAAACAATGAACTGCAAAGATTTATTTTCCTTTC
TATAAGATTGGCTACTTGTGAATATATTTTTAGTGTGGTCTTTTGGAGTCAGGAGGCAAC
CAATATTAAATAAATACTTTTTGATGAAATGTATAGCAATTGAAAGTGCTTTGTAGCTAG
TTGGAAATTCTCATTCTCCTTTTGTTTGTTTAGATATTTGGAATTTTGTAAAACTGTAGA
GAAGATTTTTATGGTGGTGCATAACTGCATGCTTGTTAATGCTTCTTTTTTGTTGAATAT
TCAGTTATTCACAATCACATAATAACATGTACAATTGTCAAAGCAGTTATTCCCAAGCCT
CAGCAAGGTTGTATTTCTTGATGATGATGTTGTTGTCCAACGTGACCTGTCATCACTTTG
GGATATTGATCTAGCTGGAAAGGTAAATGGAGCTGTTGAGACTTGCAGAGGTGGAGATAG
TTGGGTGATGTCTAAGAGGTTCAGGAATTATTTTAACTTCTCCCATCCGCTCATTGCCAC
CAACTTTGATCCATTGGAGTGTGCGTGGGCATATGGCATGAACATTTTTGACCTTGCTGC
ATGGAGGAAGACAACCATTAAAGATAAATACCACCATTGGGTCAAGGAGGTAAAACATAC
TCCTTTCGTTCACTATTATAAGATGTTCTAACTTTTTTCTCAATCGCATGTATTTTATTG
TGTTTGTTCACTCATTTTAGTCTGTATGTGGTCCATATTGAAATATCCAAAACATCTTGT
AATGGTGAACGAGCGAGTATATATCACTATTTCCATTTTCATATGTACATTTTTAGTTAT
TTATAGATGCACTTCTTTTCTTTTTGCCATTTCAACATAACAAGTTCATTTGCAACTATT
GGATGTCCAGCACGCCCCTTGTTTGACCATAGGTTTTTAACTGCACCAACTTAAACTGTA
TAGAGCACTGACTTCTCAAATATTTGGAGATTTTGTCTTCGCTGCTGAAAAAGTATAGCT
GTACTGAGTGGTGCGGAATTCCATTTTATCAGCATTGCTTTCTGCTTCACATGATAGTTG
ACACTCTGCTTGTTCTATATTTAAACATTTATAAATTTTAAATTCATGTTGGGGAGCTCC
AGTCTTATTCGTTGTATTTATTTTGCCTGCAGAATCTGAAGTCAAACTTCACGCTTTGGA
GGCTTGGAACTTTGCCACCTGGCCTTATAGCATTTAAAGGCCATGTTCATCCAATCGATC
CATCATGGCACCTTTTAGGTTTGGGGTATCAGGAGAAGACAGATATCTCTAGTGTTCGGA
AATCAGCAGTTATACATTACAATGGACAAAGTAAACCATGGCTGGATATTGGTTTCAAAC
ATCTCCAACCATTTTGGACGAAACATGTGAACTACTCGAATGAATTTGTAAGGAACTGTC
ATATAATGGAGCCTCAGTTGTAGATTGGCAAGACAAAAGATTCAACAAATAAAGGCGTAA
ATTAAGTGGAATTAAATTCGTTATTTTGGAGACCGGCATCGAAGGGTATCCAGGGAATGA
ACATAATTAGTTACATGTGCAGATGCAGCATATTCGATGAATAGAAAGGAATGTTTTGTT
CCCATTTACACGAGGATCCCTTTCCTTTTGTTTATTCCATTTGTATCATAGCTCATGAAA
TTACACTATTGTTTAGGATGGTTCTTTTGTACTTGATGGAGTATTATAAATTGCCTGATT
TGGCAGAGTTGATGATAGTCCCATCACTACTGTAATTGCTGGAGAGTGAGTATACAGTTC
GCCATGTGAAGAGTGTCAAATTTTGATTTTGCAAAAAACATCCCTGTACATTTTGCACCC
AATGTGAAGAGGGTCAAATGAAATACTTGCTTTTCATACCATGTACCTTGGGTCTTTTCT
ATCTGAAATTTCTCAGGTCATTTTGCATGCTCTTGCATGTGACTATCGGTCATTTGATCA
TCTTCTTAGTGTTCACAGTAGAAGCAGTGATTTCAATGTAAGCTGGTTAGCGGGTAGATC
AGTAGCAGTTTATAATTACTTCTGTTTACAGCCAAATTATTATTTGAATCTGTATGATTC
TTGTTCTTCAATTTCTTATAAAGTAGGAGACGATCTCTTTCTGAAAGTTGTGATAAATAC
CAGGAGAGTTTTTGAGCTTCTTTATTGTGAAAGTGTTGAACATCAAGTAACTCTATATAT
GATGGCCCAATTGGGGCAGAACACATCAACACATCATTTTCAGTATCCGTATATAGTTGA
GAAGGGCTATATTGTTGTAGCTGAAAATCTCGCATGGTATCCTATCTAAAAACTACAGTT
GATCATTGCTAGCAAGCGTCAGCCTCAAAATCAGGGAAGACGACGAAGGCAATGGACAGC
GGGGCGACATAGATCGGTGAACTGGCTGAAACCTGCACCGGGTACATCGGAGGGATGTCA
CCATCTTCAGTGAGCTCCAGAGGAACTCCGTTCAGCAGCATGGTGCGCGCAAGAGGGTTC
CCATCTTGAGCCGTCAGGTGATATTCTTCCCTCTTCTCCAGCCCATCAGAGGCTTTGCTC
CCGACCCAGGAGACCGTCCTCTTCAGGCCATGGACAAAGGAGCTGTCCCTTGTGATCCCC
TGCCCTTGCGCTATGCCGACGTTGAGGTCGTTCCTGACCGTGACCATGGACCCCATGTTT
TGGCTCAGGTTGATCAAGAGGAGAGCGATACCGCCCTGAAAAAGAACATTTTAAGAGCAT
GGCGATCAGTTTGTATGATAGCGGGTGTGCCAGTGACCAAAGTCACATCACTCTGCTATG
TTTACCAAGCCTAAATCAATCTCATGGGGACACTCTTACCTTCTGCTTTCCGCAATGCGC
ATAGGCACGCAAGTATGAAGTGCCGCCAAAGTCTATGGAAAGAACTCCGTTCCCCATTAA
TCGGTGCCACAACAAGGCACTGAAAAAATATCAAAGTTTAGTAGTCCGAAGTATATGCGA
CCGGTAAAGCATGGTTCTGGCAGGAATATACAGTACAGACACTTGCCTGTAGTAATCAGG
GTTCGGCACGTAAGTATCGGTGTCGAGAAGGCCATAGTTGCCTCCAATCAAAGTCTGTCT
GCAGTAGACCTTGGTATCATACTTTGCTGACTGGCCAAGTTGATCAAGATACCTAGTTAA
AAGAACAAACTTCAGGATCAGAAGACACGGGAAGAATGATGGCCATGACAGTCAGTTGTT
CTTCTCGCAAGTAATTACCAGAAGCTATCCAGGAAAGTATTGGAAACGGTACGGCTGCCG
CTGTTATACGCTCCGCCAGCTTCCCCGACCCACGGAGCCGACCATGGCCCATGTCGTTGT
ATCGTGAGCTGGAGATCTCTGAATGTGTCTGAAACCCTGCTTAAATACTGCGGGTCCAAG
ATTCTATTGGCCACACGTGGATCATTACCTAATCAAGATAGAGTAAATGATCTTGTGTCA
TCTTTGATATAGGAGAGAGAATAGAAATTAATTAAGGAGTACTACTAAGAACTGAAAAAC
ACTCACCAGCACCAAGATTGTAAATATGGTGAGTCATTCCTCTGACAACATTTGGCCCAG
AGACGTCAAGGAGCTGAGCAAACCATTGTTTGTCATAGAATCCTCCTGGGGCTAGCACCA
ATGGTTTGCTAGAGTTTTCATATAACTGATCGACGATCTTTTGAAGTTCAACCAGATCTT
TTCCGTATTGTTCGGCCCCCACGCTTGCACCGATTCCACTTCCACTCAATTCATTACCTA
GTAGATGAGCATAGTTACTTATACAGCGCTTTACACACATGAAAGATGTTCCTTGTTTTG
CGAGTACCAAATATAGTTTTGGGTTTGACAATGTATTACCAAATTCCCATGAATCAATAG
GATAATTCATTGAAACAGTATATTCCATAAATTCCTGAGCATTGCTCGAATTCCAAGCAC
CTCCCCAAACACCTTTGCGTATCTGCTTCCGCCCTCGAAGTGCATTAAGACCAAAAGTAA
TAACTGCACTGAAGGAATTAAACAAAATAATAATAAGCAAATGCAGTGCGTATATTATTG
TAGACTCTTTAACATTTTGAAAGGAAGATGATGGGGGTATTCTTAATGCACTAATACTTT
ATATCCCATAATAAGGTCTTATATGTGGCATGCTCAGCAATCTATGATGTAACCAGTCAC
AACTCTTTTTAGAAGAAAATATAGATGGCGATTGCTAAAGATAAACAGCTGGCAAAGGCA
ATCACCCTGTATTGAGGAACAGATCATTCATAGCATCCCATCTTTCCATGGTTATGCATC
CTTTAGAAAAGCCAAACAAGCCACTTGAAGCTTTTGTAAATGGTCTGCATGGAGATCCTA
AATTTGGTGTTTGATATACCACTTGATCTTGTAAGGAGCCTCCGACTCTGATACGTAGTG
GGCTAAAGGCTGCAAGAAAAAATTGGGCAGGAATAATTCATTAGGGGAAGAAGATGAGGT
GCCATCAAGAACATAAACCTGACTATTATGAAAAAGAGGGTAAACAAAAGAGTGAAGAAA
CTAGGTACAGCAAAAAGAAAAAACTTGGTATCTTTTTTTGAGCGGAAAAAACTTGGTAAG
TGAAGATAGTTAAGGCTCCTAGATAGTTCATTTGAGTGGCAGATCATTTATCATTAGATG
TTAGGTCTAGTAGCCATTCCCCTGTAAATGACTAACGAGGATGTTTTACCCTTCTAAAAT
TTTAAGAATAAACTGAGCCTCCATAGGGGAGTTTGTAACTGAACAGTAGAGAATTCTTCA
ATTGACAACGGTCAGAACACTAACCCTGGATAGCTTTAGCTAGCAACGGATTAGTCAAGT
CCTGGAAATTCACAGAAAGACCGAAATTAGTAATTTGTGTAAAATCCAAATTCATGTGAT
TAATAAGAGTATTCTTGGGATTTATGACCTACCATATTTAAGACAGAAGCCTTTCCCCAT
GGGCACTGATCATAGTTGCACTTCTCCGGAGGCCACCAATCCAAGGTAGCGCAAATAAAC
TCATCACTGGTCGCAGCGATCGTCCTGGATCCCCGTACGATGACGGTTACGTCGGAGTAA
TCTTCCGACATGATCAGTGTAGGCAAGCAAACAAGAAGAAGAAGTAGAGACCATAACCTC
ATGCTTTCACCACCTGCAAATGGTGTTGTCCACCAAATAGACAACTTGAGCGGTTCAGGC
TTATCATGCTCTTTAAATAACGTGATTAGTTGGTATGGATTGGAAAGGTCCAAATTCCTG
CTCTACTAGCATAGCTGAAAGTGACAGCCACAGGCCCATTTTCTTCCATATGTCACCTTT
TCCAAGTTTTAACAGGTCAACTCGTTACCAGCTTAGCTTTATTCATGTAAGATAAAACAC
TTCGTCACTGTCTCAATGATGAAACGCCATGTTAACTCAAATAAAACTAAAAATTAAAAT
AGTTTTCACTCTGCATATATTTCTTTCAAAAAGATAGCCTTTATCAAGAGAGTAAAGTAA
AAAAATAAAATTATATCAAATTGTCCCAAATACTCTGAAGAAAGGGGACCCTTTTCACAT
AGAAATGATCAACAAACCTGTACTAACTGTTCCTCTAAAAAATTTGAGCACATGAAAATC
CAGCTGAATCTGAACCTCCAACGGAGCAAGCAGGCCTGGGAGCAAGAACACGCTCTACCG
CTCTGGTAAGTAGGTTCAGAGAATGAAACTAAGCTACACCAACTCCCTTCCCAATATACA
CCTAAACAGCATCGAATCCATTGAAGCAACCAAAACGAAGCTGGGCGCAGTGGCGATCCG
CTACAGATTTGCAAGCTAGGCAGTACAGAGAAACAAAAATGGAGCCGAGGGGCCATTAAT
TACCTGGAGATCACAGCCAACCCAAGGGACTCCTCGGAGAGTCTCAGGAAAAAGAATGCT
CGAAGAAGTAGCAGGTCTCTGCGACCAGAATGGGGCCCAGCGGATCAAAGGAAAATATGG
CGTCCTTCGCCCGGAGATCCTCGCCGGCGCCGGCGCCGTTTGCCAGAGGCTGCCAAGAGT
AAAGCGGTGCTTCTCCTCCGATGCAGAGAGAGAGATAGAGAGAGAGAGAGAGAGAGAGAT
TCTTAAAGGAAGAAAATTAAAATCTGGAGGTAGTGGTTGTTGGTCCTCTTTATATCTCTC
GCTTTGAAGCTACTCCCCTACAGAAAGCTGTGCCTTTCCTAATGACCTAATCAAACACCG
GTCTAAATCTATCTGAAATCTGAAGACAGCAGATGGCGCTTCTTGCAAGTTGAAAAAGAT
GGGCACGTTTTCACTCCCCGCCTCTGAATTCTTTTGCGGTTCCAACCCAAGCCATTTTTA
GTGAGTAATTAGATTGATCATGTGAGAGTGATGCTAGTAGATTCCCTTTGGAAATATTAC
TATCATATACTTCCTCCGGCGCATCATATAGGACTCTTTTTGACACTAGCGGAAACATTT
GTGTTTTTCTTCTTCAAACTAGTAGTCATGTACATGCTGTGCACGTTAATATTAGACAAT
TTTTTTCACAAGTGATATTAAACAATAAATGAATTGCATCACATAAATATTGGGCAAGTC
TTAATTACACGCTGATATCAGGTATACTATCATTTTTAATTGGTTGGCACTGCTTTGATA
TTATATATAGTACTCCCTTCGTCTTAAAATAAGTGACTTGATTTTATACTAACTTTAATA
CAAAGTTAATACAAAATCAAGTCATTTATTTTGGAACGGAGGGAGTAGTAATTAGGGGAG
GGTGCTAACCTTGTTTAGTGCTAAATAAACACGTTGAACGCCAAGCATCGGGGCAATATA
GACCATTGGACAGATGTGGCTCAATGGATGAGATATGGTTCAATCTTTTTTGAGGACAAA
TATATTAAATCTTAGCAACTCACTTTTTCTATATTGACTAGATAATTATCTGTGTGTTAC
AACGACACTATAAATATACTATATCACTAAGCTTCCTAGAATAGGAGATCTCTCATTAAG
TCGAGGTCATCAATTTAGAATTAGATCATTGATTTTGGCCGGGTCAACAATCTATCATTC
AATTATTTAATTAACTATGCTCTCTTATTTCATTGAGAAATTAAATATAGATTTTTTCCC
ATGATTTTAACTGGATAATTTTTTCAAATAATTTGGAAGCCACGGGCCTATAAAAACTTA
TCAATCCTAGCCACCCTCTCATCATCTAGCAAAAAATAGCATCAGCATGTGATACTGTAG
CATAAATATAATACATATGGCCACCGACGCACCCCCTCATAAGTATGAGTCGATTTGCAG
ATCACAAAATCACACCGCGGAAACCCACGAGAACACCACATTAATTATATGAATAAAAAA
GAAAAGACACTCCGTCATCTTTCCCACTAACTGAAAGTGCGTTATATCGNNNNNNNNNNN
NNGAATAGGCGATTTTTAGAATTTCAATGAATAACTTGCAGCGGAAACAACNNNNNNNCA
GAAGTGCAAAGACTACAACAACAGTTTTCTCGATGAGGATTANNNNNNNNAGTTTGCACA
GTACGCATGCACAGAGTA