Contig Data
morexGenes
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Map Locations of contig_1569544 (4526 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1569544

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14971 1 697 bp MLOC_14971.1 Available Available LOC_Os05g41110.2, FRAME:-3, EVALUE:3e-68, 13105.m10397 protein ribosomal protein L7Ae, putative, expressed





CDS Structure of MLOC_14971






Contig Sequence (4526 bp)

>contig_1569544 4526 assembly3_WGSMorex_rbca.fasta
CTACCTATGTTACTCTAATCCTCTCTCTCTTCTTTAATTATTTGCCACATCACCATGTTT
GCTAGTCCCAAGACTATGTTACTAGCTATGTTACTCCTACTATAGCTAGCCTAAGACTTA
TTCTATTTTTGTTACACTTGGGTGCTTTTTCTTTGTGAATGTTCCGTTTTATATATCATT
GATAGTGGAGCTCGATCTATTTTGAGACTAAATGTGCAATAAAAATGTAAGCACACGTCT
ATTCCCATCCTTAGAGCATTTATTGTCGGATTAAGCAAATATGATCTCATGTTTCTTATT
TATCTGTCCGTATAATGACAGAAAAAAATTAAATAAAGAAAAAGAAAAGATGGTTCGGGT
GGGGTCATGAATGAGAGTTCGTTCGAGGTATCGGGGTTCTAGATGCTCTAACGTTGCAGA
TAATTATGCAGCTCAAAAAGGCATGTGCAAGTCGAGTTGGTAAGTGGTAGGACGGGGTTG
GTGGACAGCCAAAGTTCTGGGCCTCCATTGGCTGCGTCGCGGTCAACTTTTCTTTCCCTT
GTGGTTTTTCCTCAACAGCATGGACTGTCGTATGGAGCAGGCGGAAATTCGGAAGAGACG
TGGAACGCATCAAAAGCGTACTCCAAAACGAACCTTCCTTCTCTTTTCCTTCGGATAACC
TTCGGATAAGACGGTGATCCCGTCAAATTCTCTCGAGAAAAAGAGCGGATGCGAGTTAAC
GAAGCTACTCCCTCCGTTCCTAAATATAAGTCTTTGTAGAAATTTCATTAGTGAACTATA
TACAAATGTATATAGACATACTTTAAAGTATGGAACGCAGGAGTAGATGAGATAGACGGC
GTGATGACACTTTTTTCCCCTTAGCTTTCTTTCTCTTGCGTGGGTTTAGCGCGTTCTCGT
ATACACTGAACAAATTTCGTTGCAACGAGAGCATTATTCTCTAATTCCAATCCCAAATTT
ATTTTTATGTAGCATAAAACAAAATCTAATTCAGTTCAGCAATTGGTCTATCTCCGTCCA
ATAAACAGTAACTATTTTCATCAACCAATAATAACTAATAAAAACATGCAAAAGATATTA
ACACAAACAAAAAACACGCAAAAGGCATTAACGCAAACTAAACCAACAATGGACGTTAAA
GAGAACACGTGCTAAGACAAAGGCCCAACCGTCCAATGAAAAAGTAAACTACAGATCGCA
TCTAAGCTAAAGGCCCAACCTTGCATCGACAACTAATTTCATGATGTCATTACGAGTCTC
GGGCCAAGGTTACTCTTTTCATAAGAATCAGAGCATTTCAAGCCAAATCTACTGATCACA
GCAACACCATGCTTGCTTACAGCAGTGCAACAAAGAGTAATTAAGCCAGGAACAAGAACT
TTTGATCCAAACCGATAGTCCCATGAAACTTGATTGACTGATAAATGATGTACACAAGAC
CAAATCAAGTCCAGCAAGAACTACACTCTAGAACACCCCAGATGACACATCAGACAAGAT
ACTGAAAATGGCACACAGGTTTACTGGCCAGCTGGTGTTGCGTTGATGATGTCGGAGTCA
CCTGAAATTCAACACAATGAACATGATCACAAACCAAGTTGCTGTATATCAAGGTATGAA
CCAAGTAAAACAATGAGAAATGTGATGGAAAATACCAGGGTCAATGATGCTCAAGCAGCA
GACTCGGAAGTATTTACCACAGGCAGTTCCCAAATCAACATTGTCTGGAAATCAAATATG
GCATGGTTAAGTTTGAATGGTATATTATTGAACCAATAAAGAAGTTGAAATCATTACGAG
TGTTAACCATCTTATTCACAGTTTCAAACTATTTATTAGCTTCCTACTGCAACTACAGCA
AATACTTCCACAACAAGGAATAGCAACAAGTAATAGACAGGATTGTGAGCTAAGGAAGGT
TTTCGCAGTGTCATGGGAAGAAATGAACATTATTTTACAGTGTCATGGGATTAAATAGGA
ACACAAACTTACTTCCATGGTAGTGGTGGACAGTGACCTTCGCCAACATAGCATAGTACT
CAATCTCGGACTTGCGAAGTGGAGGGCAGTTATTAGCAAGGATCACTAGCTTTGCTGTAA
ATAGGATGTAAACACATTATTTCATATCCAACTGTCAACCATCAAATTTCAAAGAAAAGA
ACATGAAATTGCTGGGCCAAACAGAAGATATCTCCTATTAATAAACATGAATATAACAAA
ACCATTATACAGCAGAATATCAGGGGAACTATTATGCATTTGAATTATCCACCATAGCCA
TAGAAATATAGGAACATGCAAAGGCTAGGAGGATCAGAATACTGGCTTGGTTTCTCTGAA
GAGAAACAATGGCGCTCAGCATGTTCATAGTCCATCATCTGGGAAAGGATCATCACATCC
TCCAAACAGAATGGCACAGAAAAAACAAAAAGAATGGGTAGTATATCTATCACACAGATT
CTCCCTCTTGCTAGTATTAAACAGTGACACAAGCAACACAGGTTACATTTGCAGAATTTT
GAGAATTATTATGACAGTGACTCAATACTCCATGGCCATATGAACAGATGCACTGGTGAT
CAGTTTTCAACACCAAGTGGGCATATCAAACCATTAAGAAACACATCCATGGTGCCAAAC
ATAAATTAAAGATAACAAACCACAAAGCAGTAGCAAGCAATGTAGAACAAAAAAACTGAA
CTACTAGGGAGGATCAGAGTCCTGGCTTGGTTTCTCCAAAAGAAATTACAGCTCTCGGTA
TGTTCACTGTCGATCATCTGGGGAAAGGATCATCATATCCACCAAAGTAATACATCAAGA
TATTTGCAGATTCGTTTTGGCTGAGCTAGATAATTGTGTAACATCTAGGTAAAGGATCGT
CCTTATCTAGTTCATACCAAAGGTACAGCATACAAATCTAAATAACAATAAATAGAAAAT
ATATCAACACAATACAGATAATAGTTGCTCCGGATATCAGTTGAGATCACATCTTAAAAG
CATGAGATAATTTAAGAGCTCTAACGAAATTTCCAGCACCTAACTGGGGTACAACACAAA
ACAGAACAGAATGCTAACACGTTATCAAATACAAAAATGTTAAATAGCAGGCACTAGCAG
TCAAATCCCTGATAAATCTACAGAAATGCCCAATCACTGGGATGTACACCACCATCAGCT
ATTGGACCAGAGCAGTGAGCCCGTACTATTAGAAGGGCAACGGTGAAGCTAATCACTATG
GCATCGACTCATACACAGCAGCAATGAGATCCACTGGTAATCAGTTTTTGCGATGCGCAA
CAACACGTTTCAACATCCATTTAGCCAAAATCAAAGCCCTGACGGTCACACACCAACGGT
AACTCGAGCGTTTCCTGAATCTAAACAACATATTTCTGGTTCTTCAACTAGCATATACGT
CGCATACAATTCGCACAGACCAACACATGCCATACCGAGCGCGCTGAAACTAGGGAAGGG
AGGTTGGGCTCTTACCCTTGGAGTTCCTGAGGGTCCTGAGGACGGTCTTGTAGCCGAGCG
TGTACTTGCCACTCTTCATGACAAGCTGCAGCTTGTTGTTGATGTTGTCCCCGGACTTCT
TCTGCGCCATCACAACAAATACACCGGAAATCAGCGAGACAGAAGAAAAAAACTAGGTGA
ATGGCGGGATCTGTCAAAACTACGAAGAGCATCGCAGCAGGTGGACATAAACATGAGGGC
GAGGAAGGGGGTTGTTACCGTCTTCTTCGTGGAGGCCACCATGGTTGCACCCCGAGGAGA
AGTAGCGGCGTCGCGAGGAGCGGCGTCGTCGGCGGCGGCTTCTGCTCGGGGATGTCTGCG
AGGTGGAGGAGCCAGTTGCGCTCTAGGGTTTGGATTATAAAGGCCCGGGAAGGGGAGGGT
TTTGCTTGGTGTGGGCTTAGTGAGTTGGGGCATGGGATGGGCCAGTGGGCTTTTGGGGCG
AGTTTATTGGAAGATGCATCCTTTTGGGCTTGTTTCACCAAAGTTGAGATCGGTCACAAA
TTATTATTATTTGCATCTTCCACCAAAGTTAAGAATATCGGTCAAGGCCAAAACCGATGA
GATATCGGGATTCTCGTGGGGAGATGAGGAGGACAGAAAGAAAATGCACTAGTTCGTCTG
ATGAAATATTCCAGTCTCCTCATCTTTCATCAGAAGATTCCGACTGGATGAAGATGACAC
TTAAAAAGTCACTCGGTACGTAAATATTCGGACTACATTCCCATCCACTCGACGACGTGT
TTCCACTCGAAAGGATTCCAGTCGACATTGAAGACCAGAAGTCACCCACGAGGGCCAACG
GACATGCGGCCAATGGTCTTTAGTAGCATTTATTACTTGCATACGTTATCATTAACATAT
ATCTTTAACTCATATTGATCAAGCCCTTAGATGTTGAGACCTTGATGAGGTGTGGCGCAC
TCTATATAAGCCACCCNNNNNNNNNNGCACAAGGGTTCGCACCCCCTATATTACACAATC
CACGCTGCAAGAGCTCCCGAGCACCT