Contig Data
morexGenes
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Map Locations of contig_1569480 (2666 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1569480

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14951 1 254 bp AK357524 Not available Available None
MLOC_14952 1 477 bp MLOC_14952.1 Available Available LOC_Os02g58300.1, FRAME:+2, EVALUE:2e-13, 13102.m06753 protein expressed protein





CDS Structure of MLOC_14951






CDS Structure of MLOC_14952






Contig Sequence (2666 bp)

>contig_1569480 2666 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGGGAGCATTTGGACTCAATCATCCAACGAGTGAAGGATATGGA
ATATGGAATCGGAATGATGCTAATTAATGTCAGATATGGAATATGGAATCGGAATGGATG
ATGGTTCTATATATACGAGTACGACTGGATCACATACATGTTTCCACGTAAGAAATGTCT
CGTTTTTTAGCTTGGATCTTTGTTCCATCGTCATCCAATCAAGTGTATACACATGTTACT
CCCTCCGTTCACAAATCTATGTTTTTACATATTTTATACTAGTACTATACGTATGGACTA
CATACAAGCTGAAAATGAAATAAGTGAACAAACATAACATGGTAAAGCATGTCTACGATG
AATGATACACAAGTACCCCTTACTTCCGTTCATAAATGTACGATGTTTTACATATTTTAG
CATGGACTAGATACATATAAAATTCCAATCATTAAGTTTTTTTCCCCCTAGGATTGGTTG
TCAGGTCCGCAGGATTGCAAATCATAGGTATTTTTCTTACTTAGAATTCATTTGCACTAT
ATTTCATAAGAAATTTTCCATCGACTCCCACATGTTTGAAAGAATCCTATATCTAATCGG
TCAAACATCCTTATTGCAGTCCCTTTGTCCCGAATTACTTGCCACGTAAATATATGCATT
TAGACGTACTCCCTTTGTTTCTTGTTAGTCCGCATATAAATTTGGTCTAAGTCAAACTTT
GTAAAGTTTGACTAATTTTATAGAAAAAATATCAACATTCACAATATAAAACCACTATTA
TTAGATGTGCCATGAAATTAATTTTCATAGCATATAGTTTAATATTGTTGATATTGATAT
TATTTTTTATATATTTGGTCAAAAGAAACGGAGAAAATATTTTTAGTTCTAGATAAATTC
ATTTTTGCGATAAGTAATTTAGGACGGAGTGAGTAGTATTTAAGGTAACATTCCACTTTA
TCCCTACTAGTAAGGTAGATGTGCATTGCATATGAGAACTTACATAACCAAAGTGCCATT
GAATATTGACATACAACAGAACACAAGTAAATATACAAATTTACAGTCACACATGCATCA
TTTATGAGATGTAGATTTAATTCTCGTAGTTCATGGCACTGAAAAATAAATAAATTATTT
TATGAACGTACTGTCATAGCCTTGTGCAAGAAGTAAATAAAGCAAAAGTGAAAGTGAACT
CTTACATATGTATGTTACATTGCTATGCTACCATAGCAATGGAGTTTTTGTGTGTGTTTT
CTTTAATAAAGTTATAGGGTTTGTGCATATTACGTGTTGATATTCATAAAGTAAAAAGGC
ATTAGCAATTCATTTGGAAGAAAAAAGTTGACAGTGTTAAGATGTGACAGATTCTAGAAG
AAAGGAGAAGCGTAGTGCTTTGAAGTTTGTGTATAGGTGCATTGTGCTTAAGCTTAGTAA
TGAAATATTCTAGATAATATGCATGCATGGCAAAAGCTGAATAAGATATCCAATGGCCAA
CAATGCTCGGATTTGCCAACTTTCCACATTTTGATTTGCTTCATCCAACAACCAATATTC
AAAGTTATTCCTATACCATATATCGGTATAGTTATAGACGTTTTTCTTATTCATGCATTT
TTGGAAATCCTGTGAATCAAAGAGGTCATTAATTGTTTTGCTGAACAATATTGCACAAGT
TGATGTTGGATAGGCCCGTGAACCAGATGACATGAACCATCTCTCACTTTGTTCTCTACT
TGCACAATTGCACCCCTACTCAAGTTGGCGAGGCCCACCATGGACTCCGCCTCCACCCCA
TGCCATCGTGAACACCCCTCCCGCCGCACACCATTGTGCTCACACTGACACACTCGTCGA
TAGCGCCTATGCATTTGATTTCCAGCGAGGTCATGGAGACCGGCTAGGTCTTATGGGAGG
TCGCCCCGAGCAGCAAATCTAAGCCCTCACACGCCACAGTTCGCATGTCTACAATAAACC
ATTTTAGAAGGGTTTGTTGATGGTGTTTGTTCGATTTTCGAGACTCTAGGGGTTAAGCAT
CCGATTTCTTAGCTTAGGGTCTATGTAATCGAATCGTGAAACCTCGGCTTCTTTCAGCTT
GCACCTATTTTTTGCAAGCTTTGCAGATCGACATTGCGAGTGGAAGAGAAATGCTGAGAT
CGGGGCAGCCGTTGGATCCCAAAGTGAACGGGCCAGATCATTCCTCTGCTCACTCCTGTT
CTTATACTAGCAGTGGCCTCGCCAAGCAAAACCCATTGCCCTGATCGATCTCGCGTGCCC
TCCTCCCCCCTCCAACCCCTTCCCCGATGGCCGCCGCCGCCGCGCTCCGCCGGGCCCTCG
CTCCGGCACCGGCGCTCCTCCTCCGCCGGCAGGCCCTCGTGCGACTCCTCTCCACGCAGA
ACCAGTCCCCCGCCGCCCCCACCATCAGCCCCGCCGAGCTCGTCCGCATCAAGAACTCCA
TCCGCAGCGCCGCCACGCCGCCCGACGAGCTCGCCGCGCTCTTCTTGAAGGGGATCCCGC
ACACGCCCTTCCTCGGCGACCGCTCCATCTTCTCCCTCGCCGTCTCGCGCCTCACCGCCG
CCGCCCGCCCCGACCTCGTCTCCTCCGTGCTCTCCGCCTCCCTCACCGCCCTCCCGGCGC
CGCACCCCTCCGAGGGCTTCCTCATC