Contig Data
morexGenes
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Map Locations of contig_1569365 (4301 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1569365

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14901 1 562 bp None Available Available None
MLOC_14902 4 2790 bp MLOC_14902.4 Available Available None





CDS Structure of MLOC_14901






CDS Structure of MLOC_14902






Contig Sequence (4301 bp)

>contig_1569365 4301 assembly3_WGSMorex_rbca.fasta
TTCATGTCATTGATCCACAGAAGTTTCATTGCCAAGCAAATGTTTCCATCGAACATGAAT
ATAGTTTTTGTTACACAAAAAAATGTCTCCAAAGCATCTAAAAAATTGTAGCGCAACTTG
AATAATGCTTCGCTGAAACAAATAAATCAATCATAGTATCAAATATTCTATTTCCTTAAC
ATATTGCACTATACTTCCATCAACAAAATAGGACTTTCCATGCCATACATGCCCTACATA
TGAAGCATCTACAGAAATATTTATTTTCCGTAATTTCAAGGAAGCACTAATTTATATATT
TATTTGGTAGAAGCAAATCACGACTTACCAAAAAAACAGAAAAATAGAGTTATTATCATA
ATTTCTGGGAAGCAATTTTTGATTTTAGAATACGTTGATGCATTCATGCTTCCCTAGCTT
AATCGACAGTGCTTCCCTGGCTTAATCCAGGGTTCAAAACAATTCAATCAAAGGGTGATA
GACTAGTCTGGTTGCTAGTGGTTCCCAACAGTTAAAGCATGTTGATAATGTGAAGAAAGA
TCAGAGTAGATCAAACTTGACAGAACCATAAGTTTGTCGCAAAAACTAAAACACATATAG
GTAGCAAAAACTAAAGCACATCTAGGCACATGACAAGTATTCTCTGTCCAAAAACTAAAG
CACATCTAGACACATGACAAGTATTTTCGAACAGAGAAAGTAGGTCAGAGCAGACATAAC
AGTAGAGTAATAACAGCTAGCTGGCAATAACCAGTTGAAGAGAAATATCATGAATACAAG
ATTCGGAACAAAGCGCATCCACATTCCACAGGTTTTAATCAGAAGCTACACAAGCATATA
ACAAGCCCCATATCTCATGCTCATACAGAAGTTTCCAGAGGCTGCTAATCAACATCAGCA
GTATGCACTAACAACTAACATGGGTAGACTCAAGTTCGAGCTGCTACACCTACCACAGAT
GTCCTAAAACTACAGCATTTACCAACAATCCTCTTGAAGAGGATTATTTTCCTTCTTCGC
CCTCAGCAGAAACGATCTCAGATCAGCCAGAACAAATTGACTATCGCTTTGAGGGAGGCT
TCTCATCATCATCACCATCATCATCACCATCGTCGTCATCATTATCTTCATCCTCCCCGC
CAGACCTCTTTCTCTTTGAAGAGGATTGTGCCTTAACAGAATCCTCACCATCTTCTTCAG
CATCATCATCCTCAATCTCCTCATCATCAGCACCATCACCATTTTCTTCTGGCTCAAAGT
CACTGGAATGCTCTTCATCTTCAGCACGGCCAAGTGGCTGCACGAGATATTTAGTTCCTA
ACTCCTCCTGCCAAACAACAAATAGTACAAGTGTCAATTAGTCTGACTACTCACAACTAT
GCTAGTTGCATATTACAGTTAGTGACAGATAGATTCAAGTCACAACAGATGAGAAACGAA
AACCAATTATTTGGGGACAACTATCAACATAAAATAAGCTAGTGACAGATGGATTCAAGT
CGAAGTTCAACAAAATCAAAGTTTAACAACAGTTTGGAATCAGACTGACGTGCAATTTCT
CATCATTCTGAATAATCCATAAAGGACATCTGAGATGAAACAATCATCACTTTCCAAATA
AGAGTGGATACCACTAACAATTTAGTTTACAAAACTATTAGGGGATCAGACTGACGTGCA
ATTTGTCACCATTCTTTAAGAAAGCCCATTAAGGGCATCTGTGATGAATTAATCATCATT
TCCCCAAACGAAAATAAAACCCTCATCTGACTACAAGCCAAGAAAAAAAAATCTACCACT
AGTGCTTTGGATCAGATAGGCAAATCAGTTATTGTGCAACATAGGGAGAGCTCTAGGCCC
ATCCTCAGAAACAGCCTCTGATGTTCATCATCTCCTTTACAAAATAAATAAGAGAAAACA
GAAGTATTATGGGCCAGATCAGAAATTTTGCAACATAGGGAGAGCTCAAGGCTCATACCC
GGAAGCAGCATCAGATATTCATCATCTATTTCACAAAATAAATGAAGAGAGAAAATTGAA
AGTGTTTGACTAGTCCTTTGGATCAGATAGGCAAATCAGTAATTTTGCAACATACGGAGA
GCTCTAGGCTCATCCTCAGAAACAGCCTCTGATATTCATCATCTCCCATGGCCAAATAAA
AATAAGAAAATAGAAAATATTTCTCTAGTGCTTTGGATCAGATAGGCAAATCAGTTATTT
GGCAACATAGGGAGAGCACTGGGCTCGTCCTCAGAAACAGCCTCTGATATTCATCATCTC
CATGAGAAAATAATGAGAAGAAAATAGAAAGTATTTCACTAGTGCTTTGGATCAGATAGG
CAAATCAGTTATTTGGCAACATAGGGAGAGCTATAGGCTCGTCCTCAGAAACAGCCTCTG
ATGATCATCATCTCCAAGCACACATAAACAGGGCCAGAAAGAAGCCTACTATCAAATCTG
ACAGATCTACACCAGACAATTTGAATATCTAGGTGTCTTTGGATCTGAGTGTGAAATAGC
GAGATTTCCTGAGGACCATCTTAGGAACACCACAAGGCAAATTTAGTATAGCAAGATAAC
TCATAGACCACAGGATATCTTAGCAATACCACGAGCCAGATTTAGTATAGTAAAATAATT
CATGGACAGCATAACATGGCCCGGTTTCTCTTTTATCAGTTGCACAAGGTTTTTTTTCTT
TATATTAAAGGAAAAAAGGAAGCATATACTTTGTCCTCAACTATTCTCGAAAAGGGACGT
GCTACCAGTCTGACGGCCTACACTAGACACCACACAACAACGGAAGGCAGGTCGGTATGC
CTACTGAATATCGATTACCACAACAGGCTGAACAGATAAAAAATAAACGGTATAGCAGAG
TACAATTGACAAGATCTAAACAAACACAACAGAAAAAGCTGCAGGTTGAGCAAAAGAAAA
AATTCACAGTTCCTAAATCTATCTACCTAACCAGATGCAACCCGTCTGGCTCGCTTTTTT
TCCAGATCTGAACACATTTATCGCCAGCTACGAGAAATACGGCAACTTAAGAAAAGCATA
AATCGACAAGATCTGAAGACAGATCTGGAATTTCTCTAACATAACGGAACCATATGTTCA
TAGACTAAACGTAACCGAAATTACTGATAAATTTGAGATGTTAAAAAAATACGAGACGAT
GAGAAATTTATACCTCGGGGTCCTCCTCCTCATCCACTTCATCGTCGTCCTCCTCGTCAT
CGTCGTNNNNNNCGTCATCGTCATCGTCATCGTCACCACCGTCCTCTTCATCGCCGCCGT
CGTCGTCCTCGTCGGAGATGTCGACCACCTGCTGCGGCGCCGACCCCTTCTCCTCACCCT
CAACCCCCTCATCATCGTCCTCTTCCCCATCGTCGTCGACGTCGTCGTCGTCGTCGTCGC
CGTCAACCGCCTCCTCCTCGTCATCCTCACCTTCATCGTCCACATCCACCACCTCTTCCG
CCGCCTTTTTGGCGGCGGCCGCGGCGGCCTTGATGCGGGCGATCTCCGCCGCACGCTCGT
CGCCTTCAACCGCCGGCTTCATCTCCTCCACTCTTCTACTAGACACGAACTCTCGCAAGA
GAATTTCTTCCTCTGGTTAAAGTTGGCGTTGTGGTTGTGGAAAATTCAGGGGAAATTTTG
CGCGATTTGTAGCCGGCGGGGAAGAACAAGAGGGCCGAGAGGCCTCTAGGTTTGGGCGGA
TGGGCCAGAACAGATCCTGGTCGTTGGGTACAAGAACAGGCACGCGGATTCATGACGTGG
CGGAGCATCGGACGGCTGCCAGGGATTTGTTCGTGGGTGGTGAGAGCTCGTGAGGTGGGG
CAAAACGGCTAGGGCTGACGGCAGCGTGAGGATTTGGACGCGACTAACGCCACTGTGAGA
CTAGTGTGCTTTGGGCCATCATCCGTCGCTCTCTAGGCCCATCCCACAGGTGGTTGCCTT
ACCCACATATGTGACCAAAAGTAAGCCCACGCAGCAAATAAATTCCATCGCAAGTCCCAA
CAAACCCGCGAGAATTATGTCTCACATTAGGCGTGACGGAAGTTTCTTGCTGAAGGGAAC
TGCTCCTCGCGCAAGCAACTGGACCGGCCCATCAGCAAACTTTTATACCTACTAATAAAG
GAAATTGGTTTCTTAGTCCGTCGTGGCGTTTTGCAATATCCTTCTCAAATCTATACCTAA
TAATAAAGCGGCTATTGCTTCCTTCGGAAAACCCACCACGATATTTTTATAAAAGAGCTC
CTGTAATTTTTGTTATTCAATCCGCGCTCCATCATTTATCT