Contig Data
morexGenes
Links



Map Locations of contig_1569328 (6907 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1569328

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14884 1 1231 bp AK252668.1 Available Available None





CDS Structure of MLOC_14884






Contig Sequence (6907 bp)

>contig_1569328 6907 assembly3_WGSMorex_rbca.fasta
ATATATAGACACACACACATACACATATACATATTTTTCTGAGCATTTAAAGAGAGGAAT
TCATCGGTAGCTGAGCTATCATCGGTTAAAGGAAGGGAAGAACTCGCCTCGCAAGCCAAA
GCTCCGATGGCGTCATTAAAGGAAGAAGATTTCAATGTTGGATGCCAGTTTGGGGGCTAC
TAAGGGAGTCCGGGATTAAGGGGTCCTTCGGTCGCTAGCCTATTCTCGTGGGTCAGACTC
CCGGGCTTGTTCGACCATCAGCAGAAGCATCAGACTCAAGATGGAATCTTTCAAAGACTT
GGCGTACAATCCAAGGCGATATAGTAATCGGCATATTCCTTCTCTGTTGTAACCGACTTT
GTGTAAACCCTAGCACCTCTGGCATCTATATAAGCCAGGGGGTCATAGCTCGTAGGACAC
ATTAAGCTCATTACGATTAGGGTTTAGACTACAACATCTGATCTCGCACTAGATCAACTC
TGTACTCTGTACTGTTCCATCAATAACAACAAGAGTAGGAAGTAGGTTTTTCCTCCATCA
AGAGGGCTCAAACCTGGGTAAAACACCGTCTTAATCGTCTCTTGACACCCATCGAGCCTA
GATCTGCAGATCAGATCCCCTACTGGAGATCCAACGGTTTTGACACCGACAAGTGTGTCC
AACCATGGAAGGATATCCTGATGCAAACGAATCAGTCAAGAAATAGATTGATATATCACA
TGCTAGATCAATGCCGCTCCTTGCTGCTACATATCAATGTGATTACCTTGCTGCACACCA
CCGCACACCTCACATCAACGGTTGGGGGTCGAGCATACCACAATCACTGTGCTGCTCCTG
GTCGCTAGAGTGGTGGATGCCGTCGGACCCTTGCGTAGTGGTGGAGGCCGGATCATGTCG
GGAGTGAGGATACGAGATCAATGACGAAGGGATCTGGATTGGAGGTCACGGCCATCATGT
TGCTAGTGGAGAACGTGGTTAGGCGGCGATGCGTGCATAGTAATCAGAAGTTTGTGACCG
CTATGTTGTCCTTGGAGAACCAGGGTGGCGTCGCAAGTGGAAGGGAAAGGGTAGGTGTGC
GATTGTGCGAGCGTGGGGAGGATTAGGTTTCCTCACGCGGTTTTTATGCGTTTTTTCCAT
CGATTCCTGTATATACGGGAATAAAAAGCGGTGAGGGCATGGGTGAGAGTGAGGATCGAT
GGGAAAGGGGGTTGATGGGAGTCCTGGCGAAACGATGTACGGACTCCCCAATTAGAAGTA
GAGATATGCGGCAATCAATTTTGAATCCTAACTTTCCTAACATTGTTAAGAAAGTTAGGA
TTCAAAATTGATTGCTACATAATTGAATTTCATTGTGTGATAACGTATATTGGTTCCTGC
TACTTATAACATGGCTGGTTAGGAAAGTTTGGAAAGATTAGGGAAAAAATTATTGGAAGG
TGAAAAAATAATATGAAGGGGTGATGATAGGAGATGAGACGAAAAAACACACGAAAAAAC
TGTTAAATGCTATTCATTAATTGAGCAATTAGAAATAGAGACTTATGAAAAAGTCTACTA
AACCTTATATACTAACTCGCTCTTTTCTTTCATCTAACTATTAATCCCTCCTGATTTTCA
GTATGTGTGGGCCTAACCCTCCACCTTAATTCAATCAAACATCATCAAATCAGCTCAACC
CATAAATGCACGGAAGTCTTTACATGGATATGGCATCTTTCAAAATTAACGCGTAAACAA
AATTTGCAGGAGCCGTTTATTTGCCACTTGCGTCCCTACAAAACCCAGTACTATCTTCTC
CACATCAATACACAGTACACTTAAATCTAAGAATAGTTTCATACTTAAACTATATCCATA
CATGTACCTTTTAGAATCATACTTAAATCATACCCGTTTAATGTCATTTTCAACCAACTA
AAATTAAACTCATTATTTTTTTCATCCAAACCAAGTTAAACCCAATACATAACCATGAGT
TTAAACCCAATATATAACTATAGGTTTGCTTCAATTTTCAAATAATTGCATAAATTGACA
TGTTAAAAAGAAAATGAAATAGAAAAAATATATGTGCATCTACAACAGTTTAGGAACAAA
GTTATTTTTGAGATAGATTCAGGACAAAGCAAGATAAAAAAAGACAATGTTCATGGCTGA
AAAGCTCACTCACAAGTGTATTAAAGTCGATTGCTTAGCCAAAACACAAACAAACACTTC
CAATTTGCATGTATTGTTTTTCCATAATACAATACTACATACTGCATCGCAGCAGCATGC
ACGTGAATCAAAGATATCTGTATGTCGATGCATCATAGGTTATTGCACATAACCAAGGCC
CATAAACTGGTTTGGACCCACAATTTATAGCCGCTAAAACCAAACTGTTTAAACCCATAA
TCAACTATATCCAAATTGATTTCTTCACATATCTAAACCAAAACTAAACTAAAAATGTCT
TAGCCCAATAAAATCTAAGCCAATCAAATTCAATATAAGAACCGAACTGTTTCATTCGGT
TTTTTAATAATCATTCTCGGGTTGAAGTACACTGTCTTTGGAACAACAATTCACAAGAAT
ACAGCGCAACAACATACTGTATATATCTTCACAAAATGCAACAATATATACTGGGCGGAA
ATCTTTAATATCAAGGCATAATGCCCAGCAATAAACCAATACACAAAGTGCCCGTAATAA
TAAGCAAATAAACTTAAACAACATCCAGGACCTGACTCTGGACCAAACTGAAGCCCGTAT
ACCCAAACTGAACACAAGCATCCGTCACCTAACGGGCTTCACAGACCGGACCTTCAAAGA
CGATCAATCCCTCCATCTTGACACGGACTTAAACTTAAAGCAAACACGACACACGCCAAC
AATTTAATGGAGGTCCGGTGATGAGTCTCGGGGCACGGCGGCGATCAAGCTCTGGGCTTG
TGCTCGCCTGAAGGGGCGGCGGCCTTGTCCTCCTCCCCTGTCTTGTGGTAACCGGGCAGC
TTGTCCATGATCTTGCCCAGTAGGCCCTTCTTCTCCTTCGCGTCCGGGCTGCTCACCTCC
TCGGCGGCCGGCGCAGGCGCGTGCACTGGCGCTGGAGCAGCGTGCGTGACGGGCACCGCG
GCAGCGTCCTCCGGCTTCTTGTGGCCGCCGGGCAGCTTCTCCTTGATCTTTTCCAAGAAG
CCTTTCTTCTCCTCCTCGGGCACTGCCGGTGTGGCCTCTGTCTTCGCGTCGCCGTCGATC
TTCTCGACGACGACGTCGGTGTCATGGTGAGTCTGAACAGACGCGGGGGCCATCGGTGCG
GGTAGGCCCGTCACGTGCTCAGCCTCGTTGTCCTTGTGGCCGGGCAGCTTCTCCTTGAGC
TTCTCCTTGAGACCCTTCTTCTTCTTCCTCTTGATCACCTCACCGTTCTCATCGATGACC
TCCTCCTCCTCCTCCTCGTCACTAGACTGTACAGACGATCACACACGAGGTCAGTAATTA
ACCGCAACAACCATGTGATATCTTAATCTTAATACAGCAAAGCGCTAGTAAATCATGTTT
ACACTCACCGAGCTGGAGCTGGAGCTGGATCGGTGCAGCTTGGAGAAGAGAGTCTCCTTC
TTCTCGCCATCCTCCTTAACCTCGGGCTCTTCCACGGAGACCTTCTCCATGCCGGTGACC
AGCTCTTCCTCCTTCTTGTCCTCCTCCTCCTTCTTCTTGCCGAGGAGGTTGCCGAGTAGG
CCCCTGTCCGTCACCTCCACCTGATCGGCCTCAGCTCCCTGGTATGACTGGGTGCTCCTC
TCATCCTCCATGATCGAGATCGGTCGGTGCAGCTAAAGACTCGTGGGAGCTAGAGAAAAC
AGCGGATCAGCAAAGACTATTGGTTCTTGGCTTGTGGCTTTCTGAATGATGAAGGTGCCC
AAGCTATGACTCGTCCTTATATAGCCGCTGTCAAGTAGACCGATCGAGATCGAGAGCCGG
TGCCGAAAGGTGCACATCAGTGGCGCTGTACGTGAGGACACAAGCAAGAAAGAAGGACGG
CTCGGCGTTGCGAGTGACAGCGTGTCGGCCGGAAATAATGGCGTGACGGGGCAGCGCGTG
AGCCAGTGGAGCCCCGACGCATGTCGTGGGGCGGTCAGTCCGACGTGGCGGACGCGCGAT
CGACGGCATCGGGGGAGGTCGGCGGGCGCCATGTGGAGCGGTGGGCAGTTACGGTCACCG
AGGCGTGGCCGGGTGCGAATGGTCGGTGGGGTGCTCCCTCCCCCCTCTCTTCGTGGCGTT
TCCTCCGCATCCCGCTGCCGACTGGACGCTTGTCCACGGCCGTCGCTGTCCGGCAATACT
TTAGGGTGGATAATTCAACCAATTGATTAAGTGATCCATCGGTTTTGGAACAGTGGCGTG
AGCCATTTTGTTGATATACGATTGGCCGGGATTTTATTTAGGTGGCTGTGTGGCATTAGC
ATTGATTCTTTCGGATGCTCAATCACCAGTAGCGGACGAAGATAAGAGTTCGTGGTGGAT
TTCGTTACTAAATCAAGGGCTGCAAGTTGGCATTGGATGCACGTCGGGAGAGTGATTGCA
CCCGGGTGCATGACTAGGACGACGGGAGGGCTCTAGAGAGCCCGACGTTGACATGTGGGG
TCGAAACGGCAATGGGATCTCATCAATCCGTCGTGCAGAACCTAGCAATTAGCAAAGCAG
GTGGGGCTTCCTTCCTTCTTTGCCTTGGTCCGGCGGGGTAAGCAGACCGATTAAACTGCC
GCCCCGATTTCCAGGGCTTCTAATCAGATCGATCGGGCTGGCCGTTCATTTCCCTCTGCT
TTCTCGCTTTGATAGATGATAGCTTTCGTAGGCAAATGCCGGTGGCATGTCGGCCTTTCG
ATTTCTTTTTCACCGCCAATTCCTGGAGAACTCACCGGCCAAGTTCGGGCACCGACCGTA
CGAAAATAGCTGGAGTCATTATTGGGCGGCTTTCGGTGCACGAGATGCCGTGAAAAACAG
CGCTGCAAAGTTTGGCGCGCGGGGTCGATCGCGATACGCAACATCGACGGATCAAAACGC
CTCCTTCCTGATTCGCAAAAAAAAAAAGAAACGCCTCCTTCCTGAAGCTTTTGTTTACGG
CGGCGAGTGGGTAAATCAGCGTGCAAGCAGCTCGCCGGATGCATCGGCCGTCGTCGTCGG
GACTCGAACGGATCGGCAGATAAACTAGTCAGCAGCATCGGATCCTGCCTGGGCGGGCAC
TGGCAAGGGGCTCCGGCTTTTGCACACGGGTCGTACGACGCGGCAGACAGACTCATGGAT
CGATTCAGTTCAGCGGCACGCGAGGCGATGGCTTCATAGCTGTTGGCCCCCGCCACATGG
CTGCACAGGGCGAGACCGTGCCTTCCGCGCATCTGGCTCGCTCCCCGGCGCACCCACACC
TACGATTTGCCGACTACGTGGGCCACCCGGAATCGCTGCGTCGTTAACAGCGCGACCGCC
CGCACCCAGGGCTGACAAAATTTCATGTTTTAACCCTGTTAGGCCCTGTTTGGTTTCAAA
TAAGTCATCAACTTATAAGTTGAAAAATGCAAAAAGTGACTTATTTTATCAAACAGACCC
AACTTATAAGTCACCCCAACTTATAAAGCATAAGTTGCTTCACCCCAACTTAGAACTTAT
AAGTCATCCACTTTTGCATGAAAAGGTGACTTATAAGTCAGATGACAACCAAACAGGCGT
GACTTATAAGTCACTGGTTTTAAGTCACCTGACTTATAAGCCAGGTGACTTATTGAAACC
AAACAGGACCTTAGTCAGGTATAAATCGAGGTCTGATTCTTGTTAGTAAAAATTTCAGGT
TCTGCCCCGTTTTCAACCGTCGGACCCATGACGCTAAGGTATAACAACCTATTGTTAAGG
TATAGAAAAAGGGTCACGTTAGTACAGTGCATCCCTACCGTCACACATGCTGACGATAGC
ATATGTAACACTACAGTCAAGGTGTTTGACGGTAGGATGCGTGCGCGCACATTTGAATTT
TTTGCGGTAGGGTATGCAATCCTATTGCCACGAACCTTGGCGGTAGGTTGTTATCCCTTT
CGTTATGGGGCATGACGGCAGGGAAAGGGTCAGATCTTAAAAAAATTGTAAACGAGGGTC
AGATCTTGATTTACTTCAGCAAAAAATTAAAACACGACATTTAGTCCTCAAGACTATGTC
GACGGTGGACAAAATTACTATTCCGACCTATTTAGCAACCTTTGAATTGGCCTGTTTTGA
AAAAGAAAATCATATCTACCTTTTCTGGCCAAGCCAACATACTCCGGGTTTGGTTTGCAC
GTAAGATATCCCCTTCACGGGGTATTCAACACAGAGATCTGATATCCCCTTATGTATTCT
TGATTGTAGCAGATGGTCCTTCATGCCTCCTCAAATCGTGTTCTAAGCCATCTGTGCTTA
ATGGGGCCATCTGAGGCATCCCAAGCTTAGACGCTTGACTTTTTCTTCAATGTTACCTTG
GGGTGTATTGGGCGTATCCAATCTTAGGATCTTGTCGATCCGTATTCTTTCAAGCATCGT
GATCGCACAAAAAACTTAAAACTTCAACACACAAAACTCAACCGAAACCTCCTAAGATCC
GTTAGTATAATCAGGAAACCGTAAAATTAGGTAATGTTATAAAGTCATTTAGAATTGTTC
TTTCATAATAAATATTGTATTATACCCCTACCATGAATTATACCCGTGGATACAATTGAT
AGAATAATTAAAAGAGACACACTATACAATAAAAACTGAATATGTCTAAAATGAACAATC
ACTAATGACCTATACTAATGTTGGAAATATACCCTAGAGGCNNNNNTAAATTGGTCATTA
TTATATTTCCTTATTCATAATAATCGTTTATTATCCATGTTGGAATTGTATTGATTGAAA
ACTCAAA