Contig Data
morexGenes
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Map Locations of contig_1569236 (4341 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1569236

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14859 1 1671 bp MLOC_14859.1 Available Available LOC_Os05g08460.1, FRAME:-1, EVALUE:7e-75, 13105.m00933 protein OsFBX164 - F-box domain containing protein, expressed





CDS Structure of MLOC_14859






Contig Sequence (4341 bp)

>contig_1569236 4341 assembly3_WGSMorex_rbca.fasta
ATCCTGCTTTAATAGTAGAGATATCATATCACTAGCTCCGTGCAGTGGCTGGCGGCGGTG
ATATTCAACCCGTTCCTACATGAGGGGTCAACATTGGTGTCTCCCTCAATAACCTCGTAG
GATTGTTTGAAAGTGGGCTGCCTTTTAGGAGCAGGGGAGGCAAGGAGACCTATAATTCGC
TCATGGGGCTGGAGCTCCTCATCGGCACGGTTCGTGGACAAGCTATGGTAGCAGCGATCA
TGGTAGATTGTCGGTCTTCGCAGCCACATCATCAAACCTTATGGTCTAAGGGCGACCAAT
CTTCTTCATCTTGGCCTAGATGTCAAAAGGGAGGCAATACGGCTCCAACTTGGAGTCCAT
GATGTGTAGGTGGTGCTATTGTAGAGGTCTCGGCGACCCAAATTGTCTCATCTCACTCTT
GAGGACAACATAATCCTCTATAACACCAAGCTCCCTAATTTGAAAAGCCCACATTCAATT
GAAGTTTCCAATTAAAATTAGGACACCCGATTTTGACCAGATCAACAATTTCTCAAGGAG
ATGAAAGCGGCTCACTCATCTCTCTATGTGATATGCCTCCTAAGTTTAGAGGCCTCTCAA
TCAACTGAGGTGTTCAATTTAAAATCTGACCACTCGATTTTGACTAGGTCAACTATTTCT
TCATGAACATTCTCGTTCTTTTTTTAACTCACTGCACTCTTTAATTTTGAAGCTCTCCCA
TTTGGATTGAGGTGCTCAATTTTAGATTTAGTTTATATATGGACCGACTCAACAGTTTTT
ATAAATCAATCGATAAGAACTGGCATATAAAAACATATCAATCGCATGCACCCTCTGGCA
CCTAAAAAAAGGAAGCCAAACATGTGACTCGGTAACAAAAATATAGTGCATGCAGCCATC
AATGTGGAATTTTTTTCACAAAAGTATGAGTTCATCATCAGATAACCTACAATCACACCG
CAAAATGTCACCAAAAACACTGCGTTATAAATTAAAATAAAACACACTCCATCATTTCTC
CAACTCGCCAAACGAAATAATCCATCGGTTCCAAAGTATAAGGTGTATTGTTTTTTTTTG
AAAGGAGAAAATTCTATAATATTGTCCAAGTTTAGAGCCAAAAATATCGACATCTATAAT
ATTAAATAAATAAAATATGATGTTACGGAGGTTCATACATTAGAAAGCCTTGACAATAGA
CCGTGTTAAATTACTACTCCCTCCGTAACTTAATACAAGACTGACAAAAAAGGTCTTATA
TTATGTTACGGAGGGAGTATTACATTACCATATCCCAGTTTCAGCAGACACGAAAATATA
ACACAGACATGGTATGGCAAAAGGAACTGAGAAATGCTACAGCAGTCTTGGCCATTCCAG
GTCCAACCCAAACAGCAAGATAAGTTACAGGCTATATAAGATTAAGAACCTGAATATTAT
AACCATTCATGTACTGTCGGAAACACATGCTGGTATACCGTCAAATTATTCACAAACAGA
GAGATAACAGAGACCAGACTCCAGATCTTAAAATATTCATACTAGTTTCAACAAGACGGT
CACATATCCATGATTAAGTACAGAACTACAAAAACACAGGCAGAGTACTAAATTGACTGA
AGAGCTAGCAGCATAAAGTCAGTCCATGACTTCACTCAAGCAGCAACAGCTTCTCAGAAC
TTACCCAGATTACTGTTGCTCATATTCAAGAATCGAGATCAAACTCCACAATCATCATCA
GAAAGGCGGACAACCGTGAGGCTCTAATACACAAGACATTTAGTGCCCATCTGCCAATGA
CTCTGAGAACAAAGGAACATATGGAAGATAAGGGCGCCTCGAAGTCCATCCAAGATCACA
TATGAAACGCAGCTCCTTAGAATCAATTTTGTATGAAAATAATTTCATCTGTAATCGGTG
CCCCGATAATGTAGACTGTACCGTTATGAATATCACATCGTCTTCTGGGTGGGCTGAGAT
AACACCGTAATATTCCTTAGAGCTTGAACCGAACAGTTGCAAGTAGCTCACATTGTACTT
CAAGGTCCAATACCGTTCACTACTAGAATCTTCAAGTACCCAGATTGATGCTTCAGCAGC
GCCATAATTTGCGAGAAACAATTGTCCTCGTGATACATAAACATAAGGACCACAACGAGC
ATCATGAAAAGTAGGAGGAGGAATGAAACGGTAGTTTCCCTCGACGTCGATGACTGCAAC
CAAATTATCATAGGAACATAAATACAACACGCCCCTGAGAAATGAGCCACCTGAAAAGTT
GCGTATTTCAGTTGGATGGTCCCATTCAATTTGATGTGTCCAGCCTCCAGCTTTGGAGGA
GTAGATCCCCACCTCTTCGATGTTATAATCATACTTCAAATTCGCATTGAAAGCCACGCC
AGGTACCAACTCGAACACATGGAAATGTGAGGAGACGGCAGGGTCGAATCCCAGGCGAGC
ATACGAGAACTCGGACCATTCGTTGGCAGGGACAGTTACCCAATTCTCAGTGGCAGGATT
GCACACCACGTAATCTGGCGTCTCAGGATAAGGCTTCGAACATCGACAGAGGAGAAGGCC
GTTGCAGCAGTCCAACAAGTCGAGCTCCTTGCATTTGGGCAGGAATGAGAGGGAGGCGTC
AATAGGACACCAGTTCCCTGAGACGCTGCTGTAACCATGAGATCCAAATGGACGGCTGTC
CATGTCGTAGGTCTTGTAGAAGAAGCCGGCGAGGGTCGACCGGGGAAGCTTGTCACGGTG
GTCGGGGTGGGAGATGAGGTCCCGCCAGCGCGTGGAGACGCACTTGCAGCAGCGGGTGGA
CTTGTACGGCACGCGCGACATGATCTCCACCAGGAGGTCGTCGGGGAGCTTGGCCGTCGG
ATCGCTCATGAGGGCAGTCTCCATAGATCCCGCCGCCATCTCCGGGGAGGCAACGAGCGG
CTAATCTGTAGATCAGGGCGCAGGAGACGTCAGAGAGATACGTCCTGCTAGCAGTGAGTG
GAGAATGGAGGAAGAGAGGACCTACCAGCTGATGCGTGGCGCGCGAACGGCAACGAGAGC
AGCGGCGAGAGCGCCGGCGTTGGGTGCTCCAATCCGCGCCGGCGAGTGGGTGGCGGCGAG
ACGGTGAGGGTTTGGTTCGGATGCTGCGGAATTGGAACGGGAAGGACGGGCGCGTGGAGT
TATCTGGGCTTTTTACTGGGCCGTGTGACTCTCATTATTTTGCAATAAAACACACTTCCA
TTTTGCATTCCTATATAACAATAAAAAAAGCCGCCCTGGACGAAACCCTACCCACTGGCA
ACCTTCGGCCACCATCCCTCCTCCCCTCCCACCGTCGCCGGCGAACACCGTCGGGCAAAC
CCCGCATGGCGTTCGCTCCAACGGGCCCTACCTGTCTCTGGGAGCAAGTCGGTAGCCAAT
TGATCCGACACACTCGATTTGTCTTACTGGAAAAGCACTTTCTCTCCTCGATATTCCGCT
GCAGCAAGCTAAAGTACTCCCTAGGCATGCCTGGATGCCGTTGGAGTTGGGATTTATCAC
CTGTGCAATACCGGCACAGCGACCCGTCGAGACGATGGGAAGGTAGGGGCATGAGGTGTT
CCTCGGTCCCCTAGTTTGTTTTATATGGGCATGGAGCAAGACACTTCTTGGAGTCGATGA
TCCTTCGATTGTCGAAGCCATGGCGCTTCCGGAAGAAGTTATTGTTGCTTCACGTTCGGT
CGTGGCATCAATTTTGAGAGTTATGTAATAATGTTGATGTTTCTATACTTCGTCGTCTAT
CTAGATCAGCTAATGGTCCTCCACATCTATGTGTCCAGCATGCGTGTATATATGTTAGAA
ATGACTGAAAGCTGGATTGATAGACCTCCCAGTTTTCTGATCAGTAGCCTTCTCGGAATA
AAGCTCTCATAATTCTCTGCAAAACAAAAAGACTATGCAGCAAAAAAATGGGAAGCGTGC
ACCCACCCCCTCTTTTCCCCATGCGCCCACATGGGTCGGCCGATGTGCAGGGCGTGAAGA
CCTTTTTTTTTACTTTGTTTGACCTTTTTCCTTTGGTGTCTATTTCCCTTTTTCGGTTTT
CGGTAGTTTCCTTTTTCAAATAATTGGGACTTCTAAAATTTGTGAACTGTGAAAAACATG
TTCATGAATTCAAAAAAATATATTAAAAATGTTTGGGAAATAATAAATGTTCACGGGTTC
AAAAATTGTTCGTGCTTCCAAAACAATGGCCATGTCTTCAAAACATGTTCACAAGTATTA
AAAATATTCATGAAGTTTGTTTACAAAATGTTCATGACACTAGTGAAAAACGGGTCTTTG
GCCGGGACCATTTAGTCCCGG