morexGenes - Barley RNA-seq Database

Contig contig_1569178

Source Contig contig_1569178

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_1569178 (2682 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_1569178

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_14841	1	985 bp	AK375934	Available	Available	None

CDS Structure of MLOC_14841

Contig Sequence (2682 bp)

>contig_1569178 2682 assembly3_WGSMorex_rbca.fasta
GTGCAATCATTCCTGTGTTTCCAAATCTCCCATAGAATCAGTATGATCATCGTCTTGGTA
GCCTTGCNNTGAAGTGGTTGGGCCGCCCCGATCATTGCGGTCATTTTCTCGACTGACCCA
GTCTTCGTCGCCCATAAGGGAGGAGACAAAGAGGCGCATCCAGCCCTGGAGGCGGCCTGC
GTCCAAATCTGCAGCGTCATGGGGCATTCCCAGAACAGATGTACTGGTGTCTTCAGGTTC
CGTAGGCATAGCTGACAGAAATAGCTGACAGTTAGAAGTTTGAAAGTACTAAACCTATAC
GCTACTCCCTCCCTTCCTGTTTAGAAGACGTACTTAGAAATTCTCTGAAACCTAAATGAT
TATTGATTAGCTGCGAGGTGGACTGAAAAATAGCATTCACACTATGCATGCATGTAGAAG
TAATACAACGAAGTACTAATTAGATGCTGGAATTAAATACAATGCGTCCTAAACCTTGCC
TATTGTGAAAATGCATATATATTTAATCGTGCCTTCTAAACTGTGATGAAGAGAGTACAT
AATTGTGTTTATCAATGCATGCATGACCAATAAATAACTAAGAACTTTTACATGCATCGA
TGAGTTTTTTCTTAATACTCCCATGTCGTGATTTAATGCATTTTGATATTTGAGTGTGTG
AGGGCAAGCAATAGAAATGAGACTAATAAAACGGGAAAACAAAAGTTTTGAGTTAAACTC
TGCAAACCGTAAAGGTGGTAGTGTATTTTAACTGAAATGATGTTATTATGAGTTTGTTTG
CCTACTTATTAGCCCATACCATCCATTCAATGCCTGCAACGCGTGGAGATGTGTTTGCAT
GAGTGGGTTTGAGGTCGCAACATAGCAACCCGTACAACCAAATCCCTTTGAGAAAAGCGC
CGGCATGAGTATTATGTTTGCTTATTTTAGATTTGACATGCTACCACGATTAAGACGTTA
AAATAGAAAATCATACCTATATTCAATTAATCATGAACCCAACACATGTTTTGTTTTTTT
GGATATCGTTGTCCATAATCTGCATCCATTCCTGAACTATCTCCCAAACTGCAAATATCG
TCAGAACAACGAAATCCTAAACAGATTGGTTTCTAAATTCATCCTCAATTATATGATCAA
TGACCTCATCAAAAAATAATCTTTATTTAACGTCCTCATCGTCGCCTTCAAAGCAAGGAT
AATGAACAACCTAAAACCCTAAACAACGAGGAATAAAAATGATCCACATGCGTGGATCCA
ACGATCCTCCTCATCACTGATGACCGAGGTCACTAGCGGAGGGGACTCAGGGGAGCCGCC
GCCGGAGGTTGAGCTGAAAGATTGTCCTCCTGACGGCGCCTAGGATCCGGACGCGAGGAA
CGAGAGGAAAACGGCAAAATGGAAAATTTGATCCAAAAACCAAACTAATTCAAAAACTGA
ACTACGTTTGAAAAAAAATTCACCCAGCTGACCCTTTTGTGTGACGCTTTTGTCTTAGGC
GCCACACTATACTGTGTAGCGCCCGACACTACGTTGTGTGACGTCTGAGACCTAGTATGG
CGTCTAAGACATAGGCGTCATAATATACTGTGTGACGCCTAAGACAAAGGCGTCACATAA
TGTAGTATGGCGTCTAAGACAAAGACGTCACATAATGTAGTGTGGCGCCTGACTATCGGG
CGCCACATAAAAGGGTCAGCTGGATGAAAAAATTTCAAACGTAAAATACTTTGGCTCCTG
GATAAAATTTATTAATTTTGCCTGCTACTGTTTTTCCATATGCACATATATGTAGCTAGT
TCTCTCAGCAGCCGTCTGCCCGTACGTACGTAGACCAGATCTCACAAGAGATCCACTTGC
TAGCATTCCAAGTTACCACCGACAATGAAAAGGGATATAACCCGTGCATGCACTGTCGCA
GTCATGCATGCACAAGCATACTCCTAGTCACCATCGATGTCTAATCCAATCACGAGTGGT
CACTCCGGAACAGCGTTCCAGCCCCTGTGAATTATTCATGACATGGATTCTCACCTCTTG
CATCAAACCACAACAGACAGACCTAGCCAAACACAAAATAAAAATCACAAAAAAGAAAAA
CACTCATCGATCGATCCATTCATAGCTAGCTGATCGATCTTTCTTCTTGCTCGCTACTAG
CTAGTAGCTCGTAGCCGACGACGTCCGACACCCTCTCATGTCGATCCATCCATCCATCTC
CAAGTACACTGACTCACCGAGCTTAGCTTGGTTAGAATTAGATGGAGCAGGTGTAGCCGC
GGGGCGGGGTCTTGCCGCAGGTGAGGAGGAGCTGGACGGCGAGGGGCAGGACGAGGTTGA
TGTTGAGGAGCTTCAGCCGGATGGTGGTGCACAGGCACGCCGCCGCCTCCAGCTCCGCCA
GCCCCTCCAGCAGCGGGCAGCACTGGTTCACCACCGGGTCGCCCAGCCCGATATGCACCA
GCCCGCCCAGCAGGTCCACGCACGCCCCGAGCTTCAGCGTGTCCACCGGGCACGTCTGCG
TCGCCGGCGGCGGTGGCGGCTGCGACCGACAGCCGCACGATGTGCCCCCCGGCGGCGACG
GGGGTGTGCTCCCCGGCGTCGACGGGGGAGTGGTGGCCGGCGGAGACGGAGGAGTGGTGA
CCGGCGGCGACGGGGCAGGAGTGGTGACTGGCGGCGACGGGG