Contig Data
morexGenes
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Map Locations of contig_1569108 (3837 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1569108

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14818 1 1023 bp MLOC_14818.1 Available Available LOC_Os04g53850.1, FRAME:-3, EVALUE:9e-43, 13104.m05558 protein leucoanthocyanidin reductase, putative, expressed
MLOC_14817 1 412 bp AK373696 Not available Available None





CDS Structure of MLOC_14818






CDS Structure of MLOC_14817






Contig Sequence (3837 bp)

>contig_1569108 3837 assembly3_WGSMorex_rbca.fasta
AGCGCGGCTGTTGAAGATGCTCTTAAAAGGTACAAGTAGATCCCAGAGAATTGCATGCAT
GGTAGAATTAAATATATTGACTCTCTTCTCTCCCACACTGCTACACAACAACCATACATT
TATCATATTTATGCTAGTTTAAATTATATGGCAGAATTGCATGCATGACAGAATTAAATT
ATATTTTAAACCATAATTTTATTTTTGAAATTATATGTATATTCGAACTTCTGGCGTCAA
GACCTTTAGAATGAGATCCCTCTTGAATACATTTCAAACGTGTATAAATTCAAATGTTTG
AAATGAGTGAAATCACTCTCCTGAAAGGAGTGAAATAGGTTTTTAGAATTGAATAAATAG
GTTTTTAGGAGTGAAATAGGTTTTTCGTGATTGAGTTGCAAAGTACTGCAACGCTAACGG
TGGGGTGGACAGGATCCGAAGTCTCCTGCGGCCGAGAGCGAGTTGTCAGAGTGTGAGTGG
TGGCTGAATGGCTGATGGCTGACAACTTAAATGGTGTACCTCGTGCCAACAACCACAACT
CCAACAGTCGTACACATGAAAACGAAACTTTGGTGGAGATTTTATGTTTACCTCGGGATC
TGCTGAGCCGATGTTCATCGGGGCGGCGACGAGGAAGGCGTAGTCGCAGCCGGAAACTGC
ATCGTCGAAGCTTCCTTCTTGATCCAGCCGGGCACGGATGATCTCCAAGGGGCCAAGTGC
TTGCAAGTCCTTGAGGTGGGAATTCTTCTCCGTGTCATCTGCATACAGCTTACAGTAGGT
AAGTTAGTGGGTTGAGACCGAAACAGTTTGCATCAATTTCAGCGTGATGATTCGGGTAGA
CAAACCGATGCTGCCCTGACTTTATCAAGGGAAGCTGAATGGATAAACTAAACATGTTTA
GAACCTACTAAGAGGTCGCTTCAAAGTTTAGAGCCCATGATCTGACCTCAAAATCGGAAA
GAAAAGTTGCTGAACTAGGCACGAGACAGAACTAGAGGCGACCAAACAAGAAACGAACCG
GGGTCTCTGACCGTGGTCTTGACAGCGTAGCCTTTCTCGAGCAACAGCTTGATGAGCGCC
GAGGCGATGTAGCCGCTCCCTCCGGTGACGCACGCCGTCTTCCTTCCCTCAGCGGACGAC
ATCGCCGGCCAGTACTCGATCGTACCTCTCGTGCAAAAGACAAGTATGATTCGCTCGCTC
ACCTCGCTTCAAGAACAGAGGTTATGAGGTAGTTCCTCTGGAGTGGTTGTTGGCACACTA
TAATGGCCTGCAACCTGCGAAAGAGGAACCCGCACTAGACAAGTCGCTGGCTAGTATTAC
TCCCTCCGTCGCGGTACATTAGGCATATTACAAGATGTACTATAACCTAGGCATGTAAAG
ATTGGATAGGAGAAGAAATTAAACTGTAGAGGAAGCTAATCACACTATTCCTTTCTCAAC
GAAAAACACGCTATTAATTAGAAGACCTCTTCAAATTCAAAAAATATGACGCATATATTA
CATGCATTGGTCCTACAATTAATAGATGGGGTCTAATTAATATGCATGCAAGTAGTACTA
TTGTAATGTGTCTTAATGTTTTGGGATTATTTGATTTTCATAAGATGCTCAATGCACCGA
GACGGAAGGAGTACTACTAGTGGCGTAGCTAGAAATAAAATGAAGGGTGTGCACACTATT
AAAATCTTAGGTCTATTTTAATTGGCTTAGATGGGTCTTCAAAATCTGCTAATTTTTACA
TGCTAAAATAATGTTTTTTAAAATTTTGGATATGCCATGGCACACTCGACACACCCCTTA
GATACGCCTCTGAGTACTACCAACGCAGAAGGGGTTTTCAAGAAGTTGAAAATTACACTC
AGAATTCACTGCCGAAAAGTGATGATGTCGCTGGTGGTTGGTCACTAGGTCTGTGCAACA
TCTTCTATACAACCCACCAGCTCAACCGTGAGCAATTTGGTGAGCGTTTCTCTTATGTGA
AACGATATTTTTCAGCTGACGGATTATCACCTTCGTGGCCATCGCCTTGGTTGCATGATG
TGTGTTCCACGTGACATGGTCGACCTAACTTTTCATGATTTCTCCTTTCTACTTCCTTCA
TAAAAAAATATTGTCTTTAATTTGTCTAGATATAAAGTATCTAAATGTTCTAATCACATT
TTAGTACATTTAAATACATCCATTATTAGACAAGCTAAGACAAAAAATTTAAGACCGGAA
AAACACAAGGTCTCTGTTACAAAAAAAATATGAGGACTTGCGAGCGATGGATGACACAAT
ATAAAGTACAACCAAAGTGACGAGTTTAGAACATATATAACTGGATCCCTTTATCCGTTT
GAAATGTTCGGACAGGCCGTTCGATCAATAACGAGTCACAAAAACGCGATTCAATTAGAG
CCTCATATCCGTCTCAAACGACTTAACTAATTGACATTTTTTATATACATCTCAAATATG
AGGACGATATAAGGGCTCGCAAAAACGTCCGGGCACGTCCGGTCAATCCGTCACCTAGGA
CGCGATCCCATCTCTGATCACATTTTTCTTTTTTATATATTATTTTTCTTTCTCTCTCTT
CTTCTTCATCAATCATATGCAAGTGAACGAACATATGAAAAAAAATATGAAAAATGCGGC
TGCATAGTAAGAAAAATAAAGACTCAAAATATACATGGACGATCACTAACCGGACACATC
CACGAGCGTATAGGGGTCATATTTATTAAGTCCGGCTGTAGATGTTATTACATCCCGTCT
CCCCTTGCAATTTTCTTCAATATAAATAAGGCAAAACGTATCTACAATTTCACGTAGACA
AAATGCAGTCATAAGACTTCACTCACATGAAATCACATTTTATTGTTCCCATCGATCACA
TATCGGTCGGTGTCTAAAGAACATGTCAATGGCGCAAAATCCCGGTGCTCCTTCCATACT
CGACAACGTCATCGAATATCTCACCAAGGCACTCATGCTTGAAGGCAAACCCTTCTCCGA
CGAGCTTCTGAGACGACATGCGCACTCTCGGTTCCTCGGGGCATCCAGCGAATCTGCAGA
AAACTTGTGTCAGTGGCTCACTCAACTATGAACACTTGTGCATGATGGGAATTTCTTCTT
GTATACCGTTGGGCATTCACGTTGTACTGCGGGAATTTTTCTGCCAGGAGACGGGTGATC
TGCACGACGGTGGTGTTGTGGCTGCAGCACATGTACCTCCCCGACGAGGTCTCGTTCTCC
GCGACGAACACCTCGGCGCGGCAGAGATCCTCCACGTGAATTATCGACACGGAACCGGTG
ACAGACTGCACGCCTTTCAGGATTGTCAGCCGCGCTTCGTCGCCTGAAAAATATGCGTGG
TCACGTGCCAATATCACCGGTCACAAGGGAGCAATGTAAAAAAAGTCTACCATCCATTGC
TATCTCCAAGTTTCAGTTCGCAACACGCGAAAATAACAGTGGGCTATAGTTCAGGGCTCT
TTTGCTGCACCTTTCAGTTTGTAAACGGTAACTGATCAAGTTGAAAAATGGGTAGGGGTT
TCCCATGGTTCACTTTTTGTGACAGAGTTCATACTTTATTAAGTATAGTTAACACTATGG
TCAAAGTTTGATACTACAAAATATGAAGGGGTCGACCCATGGACAAGGGGAGCTGGTTAG
AGCATCTCTAGTAGAGTCCTCAAACCCTCAAACCTTTAAAAATAACCATTTTTTTTACGG
TTTTTATCGAAAAACGACGTGGACTACAACCCTTAAAACCGTAAAAAAAATTAGAGGTCC
AACCCTCAAACCCCTTCCCAGCCTGTAGAAATGAGGGTTGGGAGGGAAAACTCCCCC