morexGenes - Barley RNA-seq Database

Contig contig_1569010
Source Contig contig_1569010
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_1569010 (7406 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location	No map location
Predicted Genes from contig_1569010

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_14781	8	5074 bp	MLOC_14781.3	Available	Available	LOC_Os10g32850.1, FRAME:-1, EVALUE:3e-155, 13110.m19363 protein hypothetical protein
MLOC_14780	2	1731 bp	MLOC_14780.2	Available	Available	LOC_Os10g32830.1, FRAME:+3, EVALUE:3e-70, 13110.m02877 protein kinase, pfkB family, putative
CDS Structure of MLOC_14781

CDS Structure of MLOC_14780

Contig Sequence (7406 bp)

>contig_1569010 7406 assembly3_WGSMorex_rbca.fasta
TTCGGGGGCCCCTAGGGGAGGCGACGCGAGGGGGTACCAGAACTCGGTGGTCACAGTAAC
ACTACATAAAACCTGCAAGATAAATATATCCCAGTTGAGTGTGTTGCATGATCCACAGGC
TGATCTGATGAAGATTCCAATCTTGGTTGATGCGGAACCAGAAAGAACAAAGACAGAATT
GGAAAGTTTGCTCGGCCTAGCAAGTTACATTGTCTGTTCGGGAAAATTCCCAGAGGTATT
GTGAGGTCACATTTTAACAGAAGTGAATATTCCTTGTAACAACTTTCATTGGCTTTTTCA
CACACTAATTTCAGTGATGTCTTATTTTTTAAATAGAAATGGACATCGATCTCATGCATT
CCCTCTGCACTACTAGAGATCCTTGTACAATATCCCCGTGCGAGATTTGTAATCGCAACC
CTTGGAGAAAACGGTTGCATGATGCTTGAGAGAGGCACAGGTGATCCATCCTAAACTTTT
GGTCTTCTCCCGATAAGACTAACACCAGAAAGGATCAACATGCAGGCCTTTGAGATTTCA
ACCTCATTTTATTTACTTTCTTGTCATCCGGCAGGTTATTCTGGAATAGACACAGTAGAT
GTAAACAGTGTTGCTGAGTCCCTGAGGCCTCAAGTGCATAAAGATGAGAGTCTGCCAACT
TGTGTGTCATCCAAGGTATGAAAAATCGACAATATTTGTGGTCCTCTCAGCTGTTTGATA
TTGTCGGGCCATCGAAATTACTGAAGAAACTGACATTTGTTAGGATTTTACCATTCTGAA
ATTTATCATTCTAGTTCATGAGACTCTCTGGAAGAGGGCATGAGACTATATACGGAAGAT
TGCTCACAGGAACAGCAGAAAAAATCCCCGCTCCGGAGCTTGTTGACACCACCGGTTGTG
GCGATGCGTTTATAGGAGCAGTGCTTTACGGTGAGGCATATTAACTTCTTCCTTTTTCAT
TAATGATGATATTATCTTTCGCGTATAGTAAAAAGATTAATTGCTATGAATAAGCAGTAC
TGATATATTCACTGAATTGCCGCGAGAGTAATCTCTGATGTATCTTATATCACTGTTGGG
CTATGATGTGGAGTCATTTGATGTACTTTGAACTCTCTCTTCCTTAATTAATGAATGGGG
CAAATCTTTTGCCTCGGTTTAAAAAAAATCACTGAATCGCTGGCATAAGTTCCATCCAGT
TATTTTTTGCTTTCAAATAGATAGTGACTGTCCAAATTTCCCCCTGTTGATTCTACACAG
GGCTGTGCACAGATATGGCTCCGGAAAAGATGCTGCCTTTTGCCTGTCAAGTGGTAAAGT
AAACCGATGTCCAGTCTGCTAATGCCACGGAAGAAGTGGCTTTATTCCGACTGAGATGTA
CACTGAGGGCCTGCTTGATTTGGTTTGCTGTTCATGTGGCAGGCAGGTATCAAATGCAGA
GCGATCGGCGCGCGCACCGGCCTGCCGTGGCAATCTGATGCCCGCTTGTCCAAGTACTTG
CGTGAGGCACCCTGAAAGAATTGTGTGGAGAAAAGGACGATCTGATGCCCGCTTGTCATG
AGGCACCCTGAAAGAATTGTGTGGAGAAAAGGAACGGCTCGGGGAGATGCACCATGTTCT
CGGCTGTCCATCATGGTAGTGGACTGAAACATGCCTGATATGGTGCAGTACAAGTGTCAT
TGTAAGGAGCTCGCGTGTCGATGCCATATTTGTATGTTTGGTTGAATAAAATCCATCCGT
GATGGGGGAATTTGGCCCGTAATTTATGTAGAACATATGTGAAATTCTTGGTTCTAGCAG
AGAATTTGGCCACTATATCTCCTAAAATTAGGCCACTTTCCAACAACTTCGCAAAGATAC
CCAGTAATCCTCACCTGTGCCTTCAGTCCTCGGGTGTTTCACTTCACTTTCACCTTGTCC
CTTCCGTAAAAAAGATAATCGAGAGTACCCCAATGACATACCATACTTTTATAGAAGATT
ACTCCAATGGCATATCATACTTTATAGAAGAGAAGTAGGGTTTCAATTGACATGCCATAC
TTTTATAGAAGAAAAGAGTACTCCAATGACATATCATACTTTATAGAAGAGAAGCAGGGT
TTCAATTACAAGAATCAGACGCAAACATGCAAGCAATAGCGCCTCAATTCACCCCACACC
TACACCACACTAAGTAGGCTAACTCATCACAAATCACCCAACGATGAGGTCCAACACACC
CGGGACAGATCGTTGCATGTTGAGGTTAGCGGACACTCACATTTCTCTGTTTTCTCAGGT
TGCAACATATGAGAATAACCAGGGAATCAAACCCTTGGCGATCAGCCATAGGCATCATCG
TAGAATGGAAAAGTTAACCAGGGAATCAAACCCTCTGTCCCTGGTTATTCTGTAAAAATT
CTTAGCTGGAGAGTAGTCCCTAGTGATTTTTTTACAGAATAACTAGTGAATAACCAGGGA
CTACTCTCCAGCTAAGAATTTTCACGAGGCACTCTTTTCTCCTAATACTATCAAGCACGC
ATAATCAAATGCCTCACAACGCCAGCTGGCAATTAACATGTATCACAAGCACGCATTTTT
GGCACTAGAATATAACATGGCCCATAGAAATATGACCAACAGCTAGGGAGTGGAAATTCT
GCTCTTCTACTTACGAAAGAACGATACCGGTTACTTACCATCTAAGGCCTTCTAATAAAA
AGACCTGTAGTACCGATAGGTTAAAAACCAACCCATCTAAACAAAATATATCCACCACAC
AACCTAGTTACTGTACAAGGAACATCTTCACCTCTCATGTGAAGAAAACCCTACGGACCA
GCTAGTAGTAACATCACCGGTTTTATTATCCACGAGGTCCGCCAAATGCAAAAGACGGGA
CAGCCTCTGGCTCTGAGAGTGCTTCTTATGTCCATTCGTCGAGCTCAAAGTCAAATATAA
GGCCTGTAGAATCCAATCCGGAAGAGTCCCTTTGATGAGCAGCTTCTAACAATAATTCAT
CTGCAGGGGGGCTCAAAAAACCATCAAGGTGAGCTTCATCTGGATCAAGACTGCTACCAT
AATCCATAGGATGCAAAGTTTGGTTAGGAGCATTTGTCTGGGTACCACCACCTGTTGTAT
GAATGGGCAAGCCATGCCCATTAGAAGTCATCAGGTTTATGGATGACGCAACAGACTCCG
CGTGAAGACCCTCCTCCCCTTGGTTCGTACCGGCATCTAGAAGTTGGGAGGAAGTCCTCA
CAGGCTGATGGGACTGTGATGTACTGGTATTGTAAGCAGAATCATCTAATACTCCCAGAT
CAGATGCCACACTAGCAAGTATGTCTTGCCAGCTTTGTGTGGAAACATCGATTACTGGTT
CTGGCAGGAATTGTCTTCTCTGATCCATAAGCGAGGTGCACCGGGAAAGTTGAGGTCCTA
CGCCATGCAGTCCATTTGAGGTGACCTGACAAGATGGTGCCGGCTGACCTTGTTGCCCCT
GCGATGCTATTGGCGCACTGAGAGATCTGTGAGGGGCATTTTTCTTAACAGTACGACTGG
AAAGATTGGTTCTTTGTATAGGCTGAACTTGCTGAGACACATGCGGAGTATTAGTTGCTG
GTATAGCTTGAACTGGCTGTGATACATGTGGCAATGCATTGTTCATAAGGGACGGAATAC
TGACTGAAGCAGTAGAACCAAATTGATTAGCATTTCGGATTGTGTGAGCTGGAGAAGCTG
TCCCTGCTCTTTTGAAGTTTCCACGTGAATGGATGTTTTGAGCAGTGTGGACATTGTTTG
TACTTCTCCCCAGTTTTGTCGCAAGGGATGCTCTTGGTGTACTAATAGTTCGTCCTACAT
TCAGTGAGACTCTAACTGAAGTGTGCCTTTGTTGGTTTTGGCTCATGACATGCAGAAGTG
AACTTTTGTTTGGAAAAGATGAGACTTGACACTGTATATCCTTATTAATGGATGATGCCA
TTGTTGGGTAGATGGCATTCTGGCATTGTTCTGGACGAGATGCCGGAAGATTATTGGACT
TGAATGCTTGCCGCAGCTGTTTCCACTTTGATTCCTTATCCGTAGCATGACAATGATCGT
TAAGCTGGATACCTTTACCCCAATAATTACATGGAGCTGGAGCATCGCATACAAAACAGT
GGCACTGCATTTAAGAAGTAACATTGAAATGGCATAAAAATGTACATAGTCTAATGATAT
TGTGCCAGTGTTCACCAACAGCATTATGTAGTTAACACTTGTTACTTACCATGCTACAAT
GCTTCACATGAGAAGTAGCGTTGAAGGGCAAGTTAGAACATAGATGGCGCGAATGAGGGA
AGTCCCTGCACGCTACCTGCAAAAAATTGAGGACTTGTGTAAGGTTAAAAAACAAAGGAA
TGCTACTGAAGCCTGCCTACAGGTAAAACTGTAGCTTGTATGGAAAGCACTAAATTATCT
TCTGTTAAATTTAACATGAATTAAAAACCACAAATATATTCAAAAGCAATAAAGACAAGT
AGGCATGAATTAATGTGTGGCATTAAGCAAACCATCTACATGTTGCAAGTTGAATAATGC
ATCTAACCACATTCATAGTATTTGAAACAACATGAACGTTCTGTGGCAGTGTATACTAAA
TTAATGCAAGCTCTCTAAACAATATCCATGACCCGATCCGAAGTCACAGATACACATCGA
ATGAAGTCAGCACAAGATGGTCATACACAGCACAACGCATTTCATCTCCATACATAGTGT
CAAACATAAAAAGATAGTACTGTTTATATGGTATGAACAAAATGCATTGACGTGCATGAA
ATGGAAGGAAACAAATACCGGTCCTTTCTCCCCAACTATCTGCAATTCGTCCGAGCTGCT
ATCTCCCGCACTCCCCTTGTCCTCCCCGATGGTAATCACCTTATCAGGGTCACCGTCTAG
AACCACACAATCATCATCATCATCCTCATCACCGCCACCGGGGTTGCCCTTCTTTTGTGG
CGGGGAGAACTCACCCATCACCACGAGATCAAATAAGTCGTCCTCATCTGGCTCATCATC
GTTCAAAAGCTTCCCAAGCCAGTCGGCAGCCGGCTTCCTGGGCATGGGAACGTCCTCCTC
GTCGGAGCTGATCTCCACAACATTCCCGGCCGACCCCATCCAGCCCCCCGAACCCTAACA
CAGCCGCACCCCGGGGTTGGGGCCAGATTGCCCAGATTGGCAAGAACTTGGGAGGGCCTC
CGAGGAACCAAGAAACCCTCGCGAGGACAATAATACTAGGCGGGGAAAGGGGGGCCCAAG
ATGTGGTCGGCCGGCATGGATCCGGAACCAAATATGGCTCCCAAGAAACGGCCCCAGGAG
AAGGCCTAGCTCGCCAGAAGGAAATCCTTGGATTCTTTGGCTCGGTCGGCGGTCGCCGCC
GCCGCACTCAACGGTTTTGCCGCTAGAAAAGGTCGGGAATTTCGGCGGCGATGGGGGTGT
GAGGAAAGCGCCTGGAAGAAGGATAACCTGGAGATAAAGCGCAGAAAATTAGAACAGGGA
AGATCGGGAGCGGAAGCCCGGCCAAGCTTAACTAGAAATGGTTCGATGGGGCGATTAGCG
TAGCGGAAACACGCAAGAAAATAAATAAGGGGGAGGGGGAGCGGGAGAGAGCCAGAGAGG
GGTGCCCAACCTGAAGCAATCCTCTCCTGGATGGAAAAGAGGAGAGGAGGAAGAAGAGGG
CAGAGCAGAGGAGGTCAAGCTTAACTGCTTCTTCTATAGAAAATCTTTCAAGGGATTTCG
CTCCTTTTTCCGCGCTATATGTATATTATATATTTCCCTCTCATTTATAACATCGTATTG
CCGATATTTCTATGTGCCAAAGACATCCAAAAGGGTTGGTGATGAGGTCATGTGGTGGCT
CGTGGGGACGGGACCTATCGGGTTAAGGTTTATATTATACGGCTGACCGAGTTGGTATCG
AACTGGTTTGATTTGACGTCTCTCGAACGACCATCCGTTGCTGGTCTAAGGGCCGGTTTT
TGTTTGTTATGATTCTGTGGAATTAAGATTACTGACTTCAATTCTTTTCTGACATTGCAA
TTTTAGATTTTGGCTTGAGTTATGTACTGGAATGTTTATATTGCACTTAAACATAAATTG
GTTGGCGAGTTGCTATCGTTTTGTTGTTTTGAACAGTTTTTTGTTGAATACAAGCACAAC
AATGATTTAGAAATATTGTAGCTAAAATATTGGCTAGTCGATCGATCGGCCGAAATTTGA
GTTTATCGCTGCTCGACATTTCGATTCTTTCGCTTTAATCATTTCATTGGCTTTGTTCCT
CTTACACCCCCTTCCGCTGGGAAAAACATGGTGACCGCCCTTTCTCCCACGCGTCACACA
TCTTGAATTCATGCCCTCGACGCTCGCCGTCGAATATCACCGTCGTCAAATGCAACAGAA
AAAATCTGTTGACCCCGTAGCAGCATTTTTGTGGCCTTTCGAGGTGTCCTTGTGGTGGTA
GCAAATACTAACAACATATGGATCAATCATGAACACCGTAGTAGCACAAAAACAATAATA
GTTGCAACAAAAACACATAGATGTGGGTCTCAACGTGTCATAAAAATGAATGTAGCAATT
GACAACACTGATAGTACCAAAACACGAAATGGTGGTAGCAAAAAAGTGGTACACTAGTTC
CAGCAAACAAAGACATGGTAGCCTTTTTTATTGGTTCTAGCAAAAAAAGATGTTGGTGCA
AAGTTGATACACTAGTTCTACCAAACAAAAGCATGGTAGCAAAATTTTGGGTTAGTTCCA
GCAAAAATCAAACATGGTGGTAGAAGATGGGTACGCTAGTTCCAGCAAAACATAAACGTG
GTGAGAAAAAAAATTGGTTGGTTCCATCAAGAAAAGAAGACCATGGTAGCAAAAATTGGC
GTTGCTTCCAGCAAAAAAGAACTTCGCCGGAGCTCCAACACTTGTCATTGTGGTTCCAAA
CGCCCTGAACACCGGCCACCGCGTCTCTCAAGTACTTGTCGTCGCCGTCTCCAACACTGG
TGGGTGCGAGTTGCACCACTTGTCGTCGTTGTATCCAATCTTATGCCACCGTCCCAGCAC
CGTGTAGTGTCGATCCCAGCCCTAGGCGGTGCCGGTCCCTGCTCAGGCACTGGCGCTCAG
TTGCCCCGCACTTGATGGCTTGCAGGACTGGATGTTTTTTTTAAAAGACATGGATGTCAC
CTAGAGGGGGCTGAATATGCGCTTTAAAATAATTACGGTTTAGGTTTGAACAAATATGAG
ATAAAACTAATGTTTAATTTGTCAAGTACAAAACCTAAATCAACTAGGCTCACTGTAACG
ACCAAGATGTGGTCCTTTCCGATCTGGGGATCGAGGGCCCGAATTGGAAAGGAGCGCATC
TAAGCGCCTCGCAAACAGGTAACACA