Contig Data
morexGenes
Links



Map Locations of contig_1568778 (4520 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1568778

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14727 2 1516 bp MLOC_14727.1 Available Available LOC_Os08g13920.1, FRAME:-3, EVALUE:1e-155, 13108.m01491 protein glycosyl hydrolases family 16, putative, expressed





CDS Structure of MLOC_14727






Contig Sequence (4520 bp)

>contig_1568778 4520 assembly3_WGSMorex_rbca.fasta
CATGCGACGTTCCCCAACAAAGTGATCACGAAGGCAATTGAGGTGGAATAAGGTCCTTCT
AGCTCCACCCTAGCCTAAGTGATGTCTTTGTTAGCACCGAAGGGGGTGGATGAGGTTTCG
TTCTAGCCGTGGCTCTTCAAATGTGGATTGGTTGGTTTTAGGTTTGTCATCTTTTTGTGC
CGAAGTGTTGCTTCTTCAATCGTGGCGACTTGCCAAGCGAAGAGTGATTTCCCATCCAAG
AAGCATTCATTTTCTTCAAGTTCACATGTGTTGGGGTGGGCTACACGTGTGCCTACCAAA
AATCTACATGTTTTTATGTGTCTCCAGTAGTGGTTACTCGCCGACCCTTAGGGTCTTGGT
TGTAGTTTCATTTTCTATAAGGGTTTACTACGATAAGGGATATCTGACCCTGTTTGCGTC
TGTTGTGACGTACCTTTTCCATCTTTTAAATAACTCGGATGTTGCTCTATTTTTAAGAAG
CTTCCATTCTTAAAATAACTTCTAAAAACTACCAATAAAGTCACCAAAATCCATCTTAGA
TTGGCTCTAAATTGGAAAACATAATTTTTCATCTTGGATTAACTAATGGACTTGATTTAC
CCCACGCACGCACGCCCACACACACACATTGGTTTCACATATCGTCTACCGTAAAAAGGC
AGGTGGATAGGGCGCCATTTTCAATTATGTCTATCCGACTAGAGCATACTGCCACACATC
TGTTTACCTAACAAATGATGGCATTTTAGTCTGCATATCGGTCCTCTAGGGCCCTAGTTT
TTTTCCCAATGTCAAACCATGTCGAAATAGTATTTCGTTGGACATGTTACTAATATTGTA
CATCTAGTTATGCAGAGGTGGATTTGGACTAGGAAAATTTATATCACTTTAACGTGATGA
TTGGTGGAACTCCCTTTTTTGAAAATCAAAATACATTACTTAGGCAAGTGGTAGAAGCTT
TATGCCATTTTTCTAGCATCCAGTGCAGCAATGGCCCCTTGAACAACTTTCTTGGACCAT
TCCAGGGCCGTCTTGATAAGCCATTCTGGAAGCTGAGCTGAAAGATAGGCATTATTCCGT
CTTCCACTCGCTCAAGTCATTGGCACTTTTGCTTAGCACCAAATGCCTTGTATCTCTGGC
CAATCATTGCAACAGATGGCATAGAACAAACAAGAGGATTGGTATACTCCGTTGTATTCA
GACCACAGGTGATGCCTTTCGATCTTTCTGTAGAGGATTGATATACTCCGTATTCAGACA
ACGAGTGATGCCTTTCGACGGAAGATGCAATTGGAGCCCGAGCTACATGAAGCTCGTTTC
CAAAATTCTATTTTCCAGAGTGCAACAAAATTCGAATTTATTTGTGGACACGAACACACA
TGCATACCGCATATGTGCAAAATTTTGTAGCATTATACTCCCTCCGTTCCTAAANNNNAG
TCTTTTTAAAAATTTCACTAGAAGACTACATACGGATCAAAATGGATGAATCTACATTCT
AAAATATGTCTATATACGTATGTATGTAGTCTTCTAGTGAAACCTCTCAAAAGACTTATA
TTTAGGAAAGAAGGGAATACTTCCACATGTGGCGTACAGAAAAAAGAGAAATACACATTT
TTAACATACTTTATATTGCTGTTGTTGGGCTGGAGTTTTTTTGTACAACCTACAAATCAC
AAGATTTTTTGACGAAATTTAATACGTTCTTGCGGAACACATATATCTTTCAGAGGAATT
ATTATTGGATTTTTTATACTTTTAAATATACTTTTTGATTTATTCTTTTCAAAATACGGA
GGTGCCTAGAGCTCGGCCTCCAAAACTTCGCGCACTCTGCCTTTCGATTTCTTTCATCCG
CCAAGTCAAATCGTAAGATCTAGGAGTACTTTGTATAGAACCAATCATAAAACGGAAACT
AGTCCTCAAAATTTCCCCTTGTACTTTAACAAAAAGAAAAAAAAGTGATTTTTGATTTCA
TAAGCTTTGAGTTTTCTAATCCACATACGTTTATGTATGGTTTTAAATTTGAATGTCCTT
CTTGTTCTTGCCAGGAAGCCAGGTCCCCGTCTTTTCTCTCTTTCATCATCGGTGTATTTT
GATTCAAATTCAGCCAGCTGAAGATGCACCCCAATTTACTGACGTGAAATACACAGTCAC
CTTGCTAACTCCCATCTAGATTGAACATGGTAGGGCAAAGTGAACATAAAAATCAGGCCG
TTCAATGTGTACGACTGAAGGCAGCTGAACAGCGAAGCGCGCAGCTGTTGCTTGTCTACT
TGCGTCACGCAGCGACAATTCAAACTCACAAGAATCCACAACAATATCTCAGAGAGATAT
AATTCCCCTCTCAAAAAAAGAAAAGGAGATGCAAGGATTATTTATAATTTATTATGGTTT
GTTCATACATACATAACCGATCGATCACATGTCTCTCTCTCTCTCTGTCTCTCCAAGCAG
AGAAACCCACAAGAAGTCACCTTAACTTTCTCTGTAACTGTAACACTCACTGTAACAATC
AAATCCATGGTAAAATGTACTTACATGGGAAATGAGCCAACGTGTGTCCGTCTCGCTCCA
ATCGAATGGACAAACAAGAACACCAACGACGAGGAGGGAAGGAAGGAAGAAGAAAGTGAT
GATGGATCAGTTGCGGCGGGAGCACTCGGCGGGGAAGCCGTTGGGGAAGCGCCAGCCGTC
GGTGCAGTAGTCGTAGGACATGTACTTGCTCTCGGCCCAGGCGACGGTGCCGAGGGCTTT
GGCGTCGAGCTCCGTGCTCATCCAGGCGTCGCTGCCGGCGGGGCACGCGGAGGAGCCGCC
GTTGCTGACGCAGCCGTTGGAGGTGTAGCCGCGGTAGTTGACGACGAAGGGCGCCTGGGT
CCAGTCGATCTTGACGTCGCCGTGGCGGGTGGCCCAGTAGCTGCCGTCCCAGAGCGTGGC
GTGCACCGTCATCGGCTGGCTGCTCGGGTACGGCAGGTCGTCGTACTTCTTGAACGTCCT
CACCGGCACGTCGTCCACCTGGAATCTGGTTTTAAGATCAATCAATGGAAGAGTTATTAG
ACATGGAACTTGGATGCAAGACCAAGATGGTTTGGGGAATGGATGGGCGGGGTGCGTACA
TGATGTTCTTGGGGTTCCAGACGATCTTGTAGGTGTGGAAGTCGGCGGTGGGGTCGAACC
AGAGGTAGAACTGGTGCTCCTTCTTGCCGTCGCCGCTGGCCCAGACGTTGGTGTTCATCA
CGTAGGGGTCGCCGCTGAGGTTGCCCATGAACTCGATGTCGATCTCGTCATGGCCGTCGC
CCTCCCCAGACGTCAGCTGTGCACCACACAAGCACAGGTCAGCCAGAGTCAGACCATAGT
CTTCCCTCGCTTGGTCCTCTGAAAAAGACGAGACTTACGTAGAAGGAGGTGACGGTGCCG
GCGGAGTTGCCGCCGATGAGCTTCATCTGGACGCTGAACTCGCCGTAGAGGTACTTGTCC
TTGGAGCTGAAGCCGGAGCCGCCGTTGCCCTGGTCGAGCGTGAGCGCCACCTGCTGGGCG
ATGCCGTCGTCGTTCACGCGGACGTTGTTGCCGGAGCCGACCACGTCGAACTGGTCGTAG
AACCCGGCCTCCGACGCGGCGGCGGCCAAGGCCAGAACGGCCAGGCACAGGTGGAGGGAG
AAGGACGGCCTCGCCATGCCGGCAACTCGCACGTTGCTCCTCTGCTTGCCTCCTCTGTAC
CGCACCAGTGGAGTGCAGTGCTGGGATGGTGGTGTGCCGTCTCGGTGCAGGAGCAGGTGC
AGCTTTATACTGCCACCGTGCGGTGTGCGCGCTACGCCATGGCCGTCGGCCCCCACCGCG
CAAACGGTTCTGTCGGGTGGAGCGCGAAACTTTTCCTTCGGATCTGGGCAGTGGTGTCTG
GTGTGGTGGGTATGAATGATGCTCTGCTCTGCTCTGCTCTGCTGGTGTAGTTTGCTGCGT
TGCCGAGAGGAGAGGGTTCGATGTCTTGATATTCAATTTTTTATGCTACCAACAAATAAG
TGCAATTTTTCACCTGAAATACCGTCGAATTGGATCCTCGTCGTTCTTAGGTTGTTAGGG
CATCTCCGGCGAGACCCTAAAAACGATTGAGTACTAATTCATCATCCAACACGGTACCTC
ATCTATATGCATACTACTTCCTCCGTTCCTAAATATAATTCTTTCTAGAGATTCCACTAA
TAGATTACATACGGATGTATATAGACATACTTTAGTGTGTATATTCACTTATTTTGTTTC
GTATGTAGACGCCTAGTGAAATATCTTAGAAGACTTATATTTAGGAACGGAGGGAGTAGT
CCGGTTCTCCAAATTCTTGTAATTCCCACACAAACTCAAGCCTTTCTTCCTGTCCACTTT
TCTTTCATTCCGCACTTCTACCGTTTTTTTTTGAATGTTGGCAGAAGAGCTACCAAATTC
GTTGATCAGAAGAGGTATTACAAGTAACACCCCCAAAGGAGGAATGCACCGCATAAGGCG
AGTGCCAAAAGAAGAAGAAT