Contig Data
morexGenes
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Map Locations of contig_1568744 (2631 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1568744

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14712 1 1181 bp MLOC_14712.1 Available Available LOC_Os12g42090.2, FRAME:+3, EVALUE:2e-165, 13112.m04418 protein methyltransferase domain containing protein, putative, expressed





CDS Structure of MLOC_14712






Contig Sequence (2631 bp)

>contig_1568744 2631 assembly3_WGSMorex_rbca.fasta
TGTTTGCTAATTCAAAAAATGTTCATGCATTTCAAGAAATGTCCTAAAATTTGAAGGACG
TAATATGGTCAGCATCCTTGAAGATTATAGTTATTTTTCTCCCGTTGCAATACACGGGCC
CTTTTGCTAGTAAAACATAAACTAAAGTGTTCTCTACAAAACAAAAAAAATACTCCCTCC
ATTCCTAAATAAATATAAGAACTTTTAGAGATTTTACTATGTACTACATTGATAACGAAA
CGAGTGAATTTACATTCAAAAATATATGTAAATTCAAAAATATATCTATATACATCCGTA
TATAGTCTATAGTAAAATCTCTAAAATTTCTTATATTTAAAAAGGGAGGGAGTATAATAC
ATGCCTCATCCAACGCCCCACCACTTCCAGGCAGACATGTGCTCCGCATTCATGCAGACA
TGCAATGTGAGCACTACATACGGCTGGATACGGATGAGGTGATCATATCAACACGCATAG
ATAATTTATGTGATTGTATTGACGTGTTTTACATCTTTTAAAACTAAACTAAACTAAACA
TCAGATACAAGTTCCATGACTATCACTGACATTATTACGTTTAAAAAAATATACGGTTGG
TGATGCCATTATATCCCAACGGCCAACTAGAACTCACCAACTAAAAGCCTGCTCTATATC
TTTCGTTTTTTTTCTTTTGAGATCCAACGGGCTCTATATATATCTACCACCTGCTCCTCA
TGGCACATCCACTCACAACCCATACGCCACAGGCCCACAGCAGCGTACCATTCTCGTGTT
CATCCATGTCAGACTCGTCGGCGACGACAATGCGGAGGTCGTCCTCATCGAAGGCGGCAC
GGCGTGTCTGGGCACCGCGCTTCATCCAACACAAGAAGGAGGCCTTGTGGTTCTACCGCT
ACCTGTCCATCATCTACGACCACGTCACCAACTTGGCCCCCTGGACCAAGGAGATGCGCG
ATGACGCGCTCAAGACCGCCGACCTCCACAGCAGCAAGCTCAAGGTTGTCGACGTCGGCG
GTGGCACCGGGTTTACCACGCTCGGCATCGTCAAGCATGTGGATCCCGAGAACGTCACGC
TGCTCGACCTGTCCCCGCATCAGCTCGACAAGGCAAGGCAGAAGGAGGCGCTCAACGGGG
TGAATATCATGGAGGGCGACGCCGAGGACCTCCCATTCCCTACCGACACCTTCGACCGAT
ACGTCTCCGCCGGCAGGTAATCTACCGTTGCTCTACTGCTTATACCCATGAATGATGTTG
AATTTGTTTTGGTGGAGCATCGATCTCTATGGATCCTGACCATGTTTGAGCTTGGGGTGA
AGCATTGAGTACTGGCCAGATCCCCAGCGAGGGATCAAGGAAGCCTACAGGGTATTGAAG
CTGGGTGGAAAAGCATGTTTGATCGGCCCGGTGCACCCAACCTTTTGGCTGTCTCGCTTT
ATCGCCGACATGTGGATGTTGTTTCCCACTGAAGAGGAGTACATCCAATGGTTCACAGAG
GCAGGGTTCAAGGATGTTCAACTAAAGAGGATTGGACCCAAATGGTACCGTGGCGTCCGT
AGGCATGGCTTGATTATGGGATGCTCCGTCACAGGTGTCAAGACACAAACTGGGGACTCG
CCTTTGCAGGTTAGCAACATCTGTCTTTTATACTTTTTTGCATTTCGGATGCTTACATAA
AATCATAAAATGGACAATATTTTTGCATGCATGGTCGATATATTAATGTTTTTCATCTCC
TTTTTTTCTTTTCCACAGCTAGGTCCGAAGGCTGAGGATGTCAGCAAGCCTGTGAATCAT
GCCACGTTTTTATTCGGCTTCTTCATTGGAACAATATGTGCAGTGTACTATCATCTGGTG
CCTATTTTTATGTGGATAAAGGACCAGATTGTGCCCGCAGGCATGCCAATCTAACGGGCG
GGAATTATGTGTACTCTGTCTAAATAATTCAAAGATTGTGTAAACAAAGAGCAAGAAAGT
CCTGCAGCACGCAAGTATAAGATATAACCTACTCTTGGCATGATAAAATGTCAGGATAGA
AGAACTCCTATAGTGCGTGAATTGTCAAATAAAAGTACGTGAGCAATGATGTATATGACC
ATAGTCGGTAATAATAAGTACGTACTCCTATAGAAGGAGCTGCACATCCCCGTTGTAAAA
GTAAAACTAGATAATACCCCGCGCATTTGCGGCGGGATTTATAGCAATAAATTTGTTGTC
AATAAAAATTTAAATATGTGAAAATTCTCTTAGGAGGATAGAAGCACAATATGTATCACA
ATTTGTATATGGAGCGGCATGGAACGTTTTGTCCATGAGGCGAGCCAAAAAGTGCACTAT
CAAAACCAGCTTGTCATGACAGTTGAAAAAAAGAAGTGCAACTTGGAATGAAGGTCAGAC
TCACTCAATTGGTCTCTCTGATTCCTCTCTCTGCCATGTAAAATGCTTTGCAATAGGGCT
GGAACTAGCTGTACTTTGCACCGTTGTTTCTGCATCAACAATGATCCGACGAAGATCATC
ATCAACGGGCACATCTGGTGTCTCTTGATCTTCAGCTTTCCCCGTTGCAGTATCACCATA
TTCAGGGAACATAGGATCCGGATAGCTGTCATCATCCTCTTCTTCTTCATT