Contig Data
morexGenes
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Map Locations of contig_1568687 (5355 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1568687

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14691 3 1534 bp MLOC_14691.1 Available Available LOC_Os02g46850.1, FRAME:+1, EVALUE:0.0, 13102.m05265 protein oligopeptide transporter, putative, expressed





CDS Structure of MLOC_14691






Contig Sequence (5355 bp)

>contig_1568687 5355 assembly3_WGSMorex_rbca.fasta
TCTAGGGCATATTTCCAACAAGCTTTCCATCGAGGATCTCCTTAGCACGCATCGCAACTA
TTTTATCTAAGAATCATTCAAAATCATCACAAGATGTTCTAAAGGAACATACTCTAATGA
AGAGAAAGAGCACAGGGTAGTGTGATCATCAGAGGCCGAAGTACCAAGAAAATCCCGAGC
CTCAGCCCGGAGCACGGCGCGCTCCGCGATGGATGGGGTCAAGGCCCCAACCGTCATGGC
CAGGTTCGTGCACGCGCTTCTGCGAGATGCCATCACCGAGGTTGACGACGAGTGCCCCTT
CCTGGAGCTAGATTTGTGAGGATGCCGAGGAGGGGGTGGGGGCCTGGTCAGGGTCACGCC
ATCTCCTCATGTGGACACTGCTACCTCGCCCAACAGCGAACAACCAACGACCTCGTCCAA
AGCTGAAGGGCCTTGCACCGTCGGGGGCATGACAGGAGTAGCGGCTTCTATCTTCACTAC
TGGTAGGACGAGTGTGGGCATGAGAGCAGCCATGGAGGGGGCATGGAAGTAGACCATGGC
TCTGGAGTGGCCAGGGTGAACGATCCCGTGATGTCGGGGGACGCGCTGCCACATGAATCC
ACCAAAGCGGCGTTGAGGCAGTTCTTCACCGTGCTCTACCCAGTCCTGAGGATAGGGCGA
CGACGATCGGGGTGCAGAGGGAGTGATCACCTGCATACTGATGCAGGAAGCATCGCTAGC
TTGATCAGAAGCGAAGGGGGAGGAGCCCCGGTTAGGTGTCGGTGACACAGGGGAGCGCAT
GCAGTCGATCATTGCGTGCCCCAACAACACATTGGAGTTGTCCTCCTACACGGCGCCCCT
AAACGACGTTGTAGCCCAAGAGTTGAGGGACGCGGTGGCGTCAGCAACCGTGACCTGTGG
ATCCTCACACACCATAGCCGGAGGGGGAGGGGGCGTCAGGCGCTGCCACCGCAACCTGAA
GAAGATGAGCGACATCGGTTTTGGAGTCCCCCCCATGGGAATGAGCAGGTGGCTCCCAAG
AGGGGGACCGACTATGTTCAGGGGAATCCTCCTCCTCATTATTGAAGGTGCGGGAGCGAT
GGCCTCGATGGCCTTGATGGTTGTCCTGGTTCTCCGAATCACGATCTTCAGGGATGCGGG
CTCGACCTTGGTGGAGAGGTGGTTGCGAATAGATCCTCTGTTCATACCTGATCTTGTTGA
AGAACACACGGACTATGGTACACATCTTGGAGGCGAGAACCATTACATTGACCCGGACCT
CTTCATCTTTGTGTAGGGAAATCTCATCGACCACCATAACTTTGCTAACTAACTTTAACA
TATTGCGGATTACCCGCTCGTGCCTAGCGATGTCTGGGAGAACTTTGATGATGATTCACG
CCGTGTCAAGATCGGCCACAGCTGTGGGGTGCTGAGATGTCGACGACCAACTTGTTCAAT
GCGAGGGTGATGTCCATGCTCCAGGTACACATGCCAAAGCTTGTTTTTCTAGGAAATATG
GCACAAAACTTGCGGTCGGTGAGGGCAGAGACTTGCCAGTCCCATTCCACCTTGGATATG
TGGTTGAGCTCAGCAACTATCAACGTCGAAGTGGCACTGCCCTTGCCTAGCACCGAGACT
GTCAACAACAAGGAGGGGTTGGAAGGCTCAACCTTCGGGAGCTTAATATGGAAGAGACCA
AGGCCCTCAATGCCATGACCATACATGATCAGCTCCTCGCCGACCGATCGGTCCAGGCAT
AGCACAGTAGGATGGCCCGATTCTTTGCAAACATAGCACATCGAGGGTTTCTTGCAAGAG
ATTTGGTAATGGACAAAGAACCCGCAATTGAAGTAGAGCACAACAGCGTCTGTGTCGGCC
CTTAGGGGGGAGCCGCCCCCCACCAGCGGGGTTCACGACGTCCTGGTTGGCGGAGGAACA
GTTTGGCATCTTCCGCTTCTTCTTCTTGGTGCCCATCTTGCCCCTGTTATTGGGGTTGTT
GTTTGATGGGGGGAGCTGGGCTTGGTGCCGTGGCGACTGGTAGGAGCGACTAGGGGAGGA
TGCGAGGGCCGGTGACCTTGAATAGCATGGAGGGGAGGACGGTGAGTGACGGAAAGGTCT
ATGCCAAGCATCAGGGGAGCGAGGCCAGTCCCAGTTGTCTAAGCGCCTCGGAGATTGATG
GTGGTCCCGGCTAGCAGCGTTGCTCCCCCCAGCCCCTCGGGCGGGAGCTCTAGAGCTGAC
ATCGCAGGTCCTCCTTTAGGCGCTGGGCATCGGGTGGAGAGGCGTGCACGCTCGTAGTGC
TCGTCGTAGCATCGCTTCGGGCATTGGGAGACGTCATCCCAATCGCGTGGCATTGCAACG
ACCGCGGTGAACAAGAGTGAGAGCGGCGATGGAAGGGGGATCGCGGCGGAGGGCACCAGC
AGAGTGAGCAAAAGACGGACCTCGTCGGGAGCAGTGGGGGATCCTAAGCTAGGGTTCAAG
ATACCCTTGGGGAGCCAGAGCCACCTGATATGAGGAGAGGCACATCCACGGCGTGGAGCC
GTCGCCTGGACCGTGGGACATCCTTCCAGTTGGGCCAGCGCCTCGACCGGACCGTCCTCG
CCCCGAATAGGCCTATGCATGACCAGAGGGTCAGAGGCACTGCAGCCTAAGACCTCCACC
GCCAGCTCACCCCGGGAGGACTGGCCCAACAAGTAGTCCAGGCAGCGGGAGACATGCTCC
AGGGTTTCCCCATCTGCGGGGAGCCGCACTGGCGGTGGCGGTGAGTGCCCAAGAGCAGGA
GCTGATGACGAAGAGATGGTGGCGCGACCAGGGTGGAACGACGCGAATGAGGCGAGGAAT
GGGCGGTAGAAACGGTCAATGACCGGGCGTGTTTGCAGGTGTTTAAGGGGCCATATTAGC
CGTACGTGGGTGTAGATGTTGTAATGGACTTTGGCCAACCTCGACGCGGGGCAGGAACAA
TCCTGCCGCCATGCCGTGAGGCAACAGGGCCCACCTACAGTGCACGGTTTCGTTGAGGGC
GCTGACTGTTTGTTATACGCAGTCTGTCTCGTGACACCGCGACGGTTGGTGTGATTTTTT
CTGACAATTTTATTCTGAAATGGTCTTTTTAACAATTACGCTGGGCAGGTGGTTTTTGAC
TAAAATTCGATATTTTTCTATTTTTTTGATTTTACTGTTCATAGAGGGTGCCTAGGCTGT
AGGATGGTGTTATACCTTTCTCATTTGACATTACGGATGAATTTATGTATGCACCAGGGC
TCTGCACGAGAAGGAAGAATCTCCCAAGGGCTCACGGCAGATCTCCCGCTCCAAGTTCTT
CCTGGTGGCGCTCATGTGCAGCTTTGCGTGGTACATCGTCCCTGGCTACTTGTTCCCGAC
GTTGACCTCCATCTCATGGGTATGCTGGGTCTTCTCCAAGTCCGTGACGGCGCAACAGCT
CGGCTCGGGCATGAAGGGACTGGGCCTTGGAGCTTTCACTCTCGACTGGTCAGCCGTCTC
CTCCTTCCTCTTCAGCCCCCTCATATCGCCATTCTTCGGCACTGCCAACATCTTCGTCGG
CTATGTTTGCTTCCTCTATGTGCTTGTGCCCACGGCGTATTGGTGGATGAACCTCTACAA
CGCCAAGACGTTCCCCATATTCTCCTCACACCTCTTCATGTCTAATGGATCCGCCTATGA
AATCACTGACATCGTGAACCAACAGTTCCAACTTGACACGGACACGTATGCAAAGCTTGG
AAGGATAAACCTTAGTACCTTTTTTGCACTCTTTTATGGGCTCAACTTTGCCACCATTGC
CGCAACCATCACCCACGTCGGCATCTTTTACGGGAAGTAAGGCCTCTCAATTAACTCTGT
ACGTACGCTGTGAATTAATACATGGGCGCGGTTTCTAAACTGATGGACGCTCGTTTCCGA
GCTTCACACCAGGAGGAGCCTGACATCCACACAAAGTTGATGAGGAAGTATGACGACATA
CCAACGTGGTGGTTCTATACGTTGACGGTATTGTCGATGACAGTGTCTCTTATCCTCTGC
ACCGTCCTCAAGGACCAAGTTCAGCTCCCATGGTGGGGCCTCCTCTTCGCTTGTGGCATG
GCCTTCGTCTTCACGCTCCCCATAAGCATCATTACTGCAACCACTAACCAGGCAAATATA
TTTTCGAATTTTAATGTTTCTCCATTATATTTCTCCTGCTCTTTCAAGATTTCTGCATGA
AAAACTGACAAAGGCCTCCAAATTTTCATGTACAGACTCCTGGTCTGAATGTCATCACCG
AATATGCAATGGGACTAATAGTGCCTGGATACCCCATCGCCAATGTCTGCTTCAAGGTAT
ACGGCTACATGAGCATGTTGCAGGCAGTTGCTTTCCTCTCAGATTTCAAGCTCGGACACT
ACATGAAGATACCTCCCAGATCTATGTTCATTGTCCAGGTATCTAAACCACTAAATCTGC
TCACGTTGTAAGCGAAGTGTGATATGCAGGAAGATAAATTTTCCTGACATTCGCGCACTA
TATATTTATCCAGGTTGTCGGTACACTGGTGGCCGCGACTATCAATCTCAGTGTGGCATT
GTGGCTACTTGGATCCGTGGAGAACATCTGCCAGGACCAATTACTGTCACCAGACAGCCC
ATGGACATGCCCCGGTGACCGTGTCTTCTTTGATGCGTCAGTTATCTGGGGTCTTGTTGG
CCCGAAACGCATTTTTGGGCCACATGGTAACTATGAAGCTCTCAACTGGTTCTTCCTCGT
AGGGGCAGCAGGCCCTGTCATGGTGTACATCTTCCACAGGATATTCCCTAGCCAGAAGTG
GATACTCATGATAAACCTGCCAGTGCTCATCGGCGCTACAGCCTACATGCCAGCAGCGAC
AGCCGTGAACTACAACTCGTGGCTGCTCATTGGCACCATCTTCAACTTCTTTGTGTTCCG
GTACCGGAAGACGTGGTGGCAGAGATACAACTACATGCTCTCTGGCGCGCTCGATGCAGG
GGTCGCGTTCATGGCTGTGCTGCTGTACTTCTCACTGACTATGGAGAACCGGACCGTCGA
CTGGTGGGGCACGGCCGGTGAGCACTGCCCTCTAGCCTCATGCCCCACTGCTAAGGGGGT
AGACTTGGGCCCGGATAGTGCATGCCCTGTGTTCTAAGCTAAATCTGTTTCATATGATCC
TTTCCTAAACATAATTAGTCATATGATCCATTCCAGTTGTGGTAGCGACTTTGCGTAGTA
CTCCCTCCGTTCCTAAATATATATTTTTTAGATGTTTCGCTAGAAAACTACGTACGGATG
TATATAGATATACTTTAGAGTATAGATTCATTCATTTTGCTCCGTATGTAGTCTGTCGTG
GGTATAAGTCTGACA