morexGenes - Barley RNA-seq Database

Contig contig_1568651
Source Contig contig_1568651
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_1568651 (9594 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location
Predicted Genes from contig_1568651

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_14667	10	4687 bp	MLOC_14667.2	Available	Available	LOC_Os06g16790.1, FRAME:+1, EVALUE:0.0, 13106.m01851 protein go35 NBS-LRR, putative, expressed
MLOC_14668	2	1140 bp	AK365822	Available	Available	None
CDS Structure of MLOC_14667

CDS Structure of MLOC_14668

Contig Sequence (9594 bp)

>contig_1568651 9594 assembly3_WGSMorex_rbca.fasta
GTGATTGGGGCGTAAATAGAAGTTGGGGGTTTTGGGGGGGGGGGGGTTACGAAGCGACGA
GACGACCTACCAACTGTTTTATTAGGAATTTGGCTTGCTGAAATTTCGTAAATATATGCA
AAATTTTAGGAGGTGAAATCCTAAGGCCTTGTTCGGTTAATCCCCATCATAAGGGAATTG
AAAAGGATTGAAGGAGATTAAGGTGAATTTTAATTTACAGGAATTTAATTCTACTCAATC
CGCTCCAATCTTCTTTAAATCCGTTGTAACCGAAGAAGGGTCTAAGGATGTCGAAACCGA
TTTTGACGGTCGTCACGCGTTTTAGGGGACAGCAGCTGTGAGCCCGTGACTGTGTCTGTG
AGGGCACTGCACCAGATGATTGAGGAAGGGAGACTTGAGACTCCACTCTCGCCACCCACC
CCATGCATACGGTGCAGCGGCGGCGCTAGGGCGCTGCCAGAAAGTGAGACACGCCGTCGA
CCTCCTCCAGCCGCTGAACGCCCCCGACCTCCTCGTCACAGTCTCCGGACCTTCAGCCGC
CGGATTTGACGTGACCCTCACCGCTTCTGGCCAGCGGCCTAGGTAATGTACCTGCACCCC
CAGCCTCTAGATCAACCCCATCTACGCTTGCTTCGTTGAGTTCCATGTGCATCTACTCAC
ATGCCGGCATAATCTCCAGCAAATCGGCCGACGACTTGCGGCTTCTAATGGCGGATCCGG
TGTCCGCTGCTGTCGCTGTAGGGTGGGCCATGAAGGCCGCTGGGTGGGTCGCCTCGCCCA
TCATCTCTGAGCTTTACAAGAAAGCCTCCTCCTTCCTCAACTTTGATGCGTCGCGGAAGC
TCAAGGAACTCGAGCCAAAGATTTTGCTGCTACAGCGCGTGCTGGAAATGGTTGAGGAGA
GCCCTGACAGGCCTCGTCTGGAGCAGCTGTTCACGGATCTTAAGTCTGCTTTCTACCAAG
CAGAGGACATCTTGGATGATGTTGAGTATTACCGTCTCGAGAAACAGATACAAGATGACT
ATCTCAAGTTAGAGGTCGCCGCGCCTCAACTCAACAAGAATCGCATGAAGAAGCTCTTCA
AGTCTGCCATCAAAAAGTGCAACCCCCTGAAAAATGAGGTGCTTTTCTGTTCCATGTGTT
TGTATTTTCTCTCAGGCATATATATATATTTTTTTGCAAAAATATTGTACATGAGAAGAT
GTTAGAATTGACAACTTAGCAACTAAATCTTCCTACACACCGTATCGATCACACTTGTCT
TGATGTCACCGATAAAATAGTTAAAAGTTTGTTCTTCTCTAAACTATTTGAATCACAGCT
AGAAGTTTCTAATGATAATCCGTCTCCTCTATTTGGAACGCAATTATATTAGCATCGCTG
AGAGGTGGGGAAAGTCAAAATAGAGGATGCAACGAACTAGTATAATTGATCCAACTACCT
TTCGTTTTGCAAATCAAACTGAAAATTCAAACTTCCTTCAATTTTTTAGCGTAGGTTTCT
CGGATCCGTAGAAATATTTCCTCATTCCTTGATCTCCTTGCTTGCTATTATGTTTTGCAG
GATTGTGGCATGTCAAAAAATGAGTTGAAGCAGAGCCTAAAGAAAATAGAAACGGTCATA
AATGACGCATGTGAATTTTTTGAACAGATGAACTTGCCAAAGAAAAGTAACGCTAATTTG
AGCAAACCTGGCAACTCACGAGGTGCAGTCACTACGGCGAGGCCTCCATCTGTGGTATTC
GGACGAGATAAAGATTGTGATAACATAGTAGCAATGCTTCATGATAAGGAAGAATATGCT
CAACCAGACACCAATAGGGCTCAATGTTATTCCATAATCGGCATTCATGGCATCGGTGGT
TCTGGGAAATCAACCCTTTCACAACTTGTTTGTGCTCGTGAGGAAAAGGATGATCATTTC
AACCTTGTTATGTGGGTTCACGTTTCTCAAGATTTTAGTGTGGATACCATTTTCAGGCAG
ATGTCTGAGGCCGCTACCAGGATCCCGTGCCCTCAGTTCAGTAATCTTGACACCTTACAA
ACTAATTTGGAGAAGGAACTGCCTGGAAAACGGTTCCTCTTGGTACTAGATGATGTTTGG
TACAATAATAGAGATGTGAGGCAGTATGAGAAGCTGCAACAGATACTTTCACCAATGAAC
GCTGGAGAGGCAGGAAGCAAGATCCTGGTGACTAGTCGAACTAAAGATGCATTGTTAGCT
CTGGGCGCTGCAGAGCAGAGATGTATTCCCATGTCAGTCCTAGATGAAGATGTTTTCCTG
AATTTATTCAAACATTATGCATTTCACAATGTAAGTGTTGATGATCATGTCCGAAGAATA
CTTGAAGAAATTGGGAACGACATTGCAAAAAAGTTGAAGGGATCACCTCTAGCGGCCAAA
ATTGTTGGAGGGCAGCTCCGTATGAAGCCAAACATTGATTACTGGAGAAGTTCCCAAGAT
GGGAACCATTTGGATGACACCATGGGATGTCTGTGGTGGAGCTACCAACATCTTGATGAA
CAGGTCAGACGATGCTTTGCTTACTGCAGTATTTTTCCTCGGAGACGTCAGTTGGAACAA
CATGAGTTAGTTAAGCTTTGGGCTGCAGAAGGGTTTGCTAGAAGTAGCGATGAAGGGAAG
GATTCAGAAGATGTTTGCCAGGGATACTTTGATGAACTAGTGTCAGCCTCATTTCTGCAA
CCTGAAGTAAAGATGGACGCCGATGAAATGGACACTTATCAAGTTCATGATCTGTTGCTT
GATTTAGCGGATAAGGTTGCTGGAAGTGATTGTTTCAGAATCGAGAATCAACGGAAATGG
TCAGGAGATAGCTGGATAATGGAAGGATGTGAAAAAGAAGTTCCCCCAGACGTCCGCCAT
GTTTTTGCTCAGACCTATGATTCAGAATTGATCATTGAGAAGATATGTAAACTGGACAAC
CTGCGTACTCTCATCATTGATAGTGTACAATGGAGAAAGCCAGTTGAGGAGAAAGTCCTC
AAGAGTCTGTTTGTGAGGCTAAGGAAGTTGCGGGTGCTTATAATACCTAGTGATCAAGGT
ATGTTGTCAGTCCCAGATTCTATTGGCCAGCTAAGGCATCTACGGTATCTTGCTTTTATG
GCTAGACATGGTTCAGACAGCAGACTGGTTTTACCAGGCACTTTGACCAAGCTTTACCAT
ATGCAGGTTCTAGATTTTGGTAATATTAGTGATTTGGTGTTTGACTCGTGTGAAGATATG
TTTAGCCTCATCAACTTGCGACATATAATCCGAATGCCGTTTCGGGAAATTCAAAGCATT
GGCAGGCTGACATTACTTCGAACGCTGGAAACATTTGAAGTAAGAAAGGAACAAGGGTGC
GAGTTAAAGCAACTCAGCGACCTAAACCAGCTTTGCGGCAAACTGACAATCCTGGGCCTC
CAAAACGTTGAAAGCCAGCAGGAAGCTCTTGAAGCCAAGCTAGCCGATAAAAAAGGGCTC
AGAACATTGGAACTGTGGTGGAATTATGATGAGTGGGCAGAGTTAAAAGAAAAGGAAGTT
CAGACAGAGGTACTAGAAGGTCTATGCCCACAGAAGCTTCTCAAATCACTGAGTATGTAC
AATTACCAGGGTTTGAGATACCCAAGTTGGATGATGGGTAAGCACAATGGTGGCCCAAAG
TATCTGAACACACTCAGCCTGTACTGTTGCAGCACAGAACTTGGCCCAGAACTTGGTGGG
TTTTGCCCTTACCTCCGTTCACTCTTTATCTTCGGTTGCAGCTGGGACACCTTGCCAGAT
CATATGGAGTACCTGACGTCACTGAAGGACCTGGGCCTTGATCGCTGCCAGAATATTCGG
TCGCTTCCAACGCTGCCTCAGTGTCTTGAGCGCTTCAGACTCAGTCGCTCCAATGAGATG
TTGATGAGCTCGTGCAGAACAGTTGGAGATCCCAATTGGGAAAAGTTTCAGCACGTTCCT
GTAGCATATGTTGATGGTAAATAAAATCGCTCCCATAATAATACGTATCATTTTGTGTGT
GTTGCATAGCATCACCATGTATATCTTCCATGTCAAGAATTGTTATGATCGTTTCTTAAT
CTGTTTGCTAAACTGTCAAACACCAGGCTACCGGCTGGAAACGAGAGCCCAATATACTTC
ATCACCAGAGCCTGAGACCCCTAAAACGTGAAGCCGTTTGATCCTTTAACCTGCCTACCA
ATATACTTAGTCCGTTGTATGTCACTGATTTTATGAGTGAAGTGGTGCTGCCGCGGTCAC
CGCGTCATCGGCTGGCTACACGATGCAGAATTTGATCATGTATGCAAATGATTCACACTG
GGTTCCCTCCCTCCAAGTGGGCTATATTTGGTCCTTGATGGCGAGACGTGCAACTGTATC
CTGTAAAAATGCTGTGAAACCATTGAGCACTGAACTCATCATTGATAGTGCATGATGGAC
ACAACCAGTTGAGGAGAAAGTCCTGGAGAGTATGTTCAAGAGGCTAACGAAGTTGGGGGT
GCTTACCATACCTGTCTATTATGGAAAAGGAAAAGGAAATGAAGGGAGTATAATCATAAT
GCCGTGTCAGAATATTCCAAGCATTGGCAGGATGACATTACTCCGGGATAGAAACTTTGA
AAGTAAGAAAGCGACAAGGCTACGGGTTAAAGCAACTCAGCGACCTAAACCAACTTCGTG
GCAGACTGATTATCTGGGACCTAAACCAGGAATCTCTTGAAGCCAATCTGTACGATAAAG
AAGGGCTCAGAACATTGGTACTGCTGTGGGGTTATGATAAGAGAGGAGATTTAAAAGAAC
AGGAGGTTCAGACAGAGGTACTAGAGGGTCTCTGCCCACCGAAGTATCTCGAACCATTGA
TTATACAGTGCTACAATGGTTTGAGATACCCAAGTTGGATGATGGGTGCTAAGCACAATG
GTGGCCCAAAGTATCTGAACGAACTCACCCTCGAGTCTTGCAGCACAAAACTTGGTCCTG
AATTTTGTGGGTTTTTCTCTCACCTCCGTAAACTCAAAATAAGCGATTGCAGCTGGGGCA
CCTTGCCAGATAACATGGAGCACCTGACATCACTGAAGGACCTGACCGTGGATTTCTGCC
GGAATATTCGATCGCTTCCGCGGTCTCTTGAGCACTTGAGACTGCATGGATGCAATGAGA
TGTTGATGAGATCGTGCACAACAGTTGGAGATCCCGATTGGGAAAAGCTTCAGCACGTTC
CTGATGTATATATTGATGGTATATCACCATATCTTCCTTGTCAAGAGTTTTCGTGATCGT
TTCCTAATCTGTTTGCTAAAGTGTCAAACACCAGGCGACAGGGTGGAGACGAGAGCCCAA
GTAGATGGCGGATCTTCATCATCAGCGCCCAAGAACCTGTTCCGCAGCCCTATGGCGTGG
AAGTCGTGTGATCCTTAAACCTGCCTGCCAATATACTTGGTCCATTCCATTGTATGTCAC
TGATTTTGAGAGTGAAGTGCTGCTGCTGCAGTCACTGCGTCATCAGCTACACGGCGCAGG
ATTTGATCATGTTTGCAAATGTTGTGCACTGGTTTTATTTGTTCCCTCCCTATGGGCCAT
ATATGGTCCTTGATAACGTCCAACTATGTCATGTAATAAGGGAAAAGATTTCCGTCGGTC
GGATGAAAACAAGAAATGTCACCCCCCTTGCTCTTCCGCCACGTTGCTCTGTGAACCGAT
GCACCGCTTCTCCATCCCTCCTCCCTCTCCATCTTATCTCTTCCAACAGTTTCTACAACC
CGTTCATTGTTTCAGGAATTTGTTTCTGCAAACATGGCCACTGTTGCAGAAAGAGGAAGA
AAAAAAATTCTGTAATAGAGCGATTGTTTCTGAAACTCGACCTTTGTTTCAGGAATTAAT
GGATTGAAAATTTATTTTTTCCAACAAAGAGTTTGTTTCTGCAACACGACCATAGTTGCA
GAAAGAGAAAGGATTTTTTTTTACAACAAAGCGATTGTTTCAGAAACTCGAGCGTTGTCT
CAGAAATATCGGGTGTCCAGCCAAAGCGCGCGCAAAGAAAAAAAACTACAACAAAGCGAT
TGTTTCAGAAACTCGAACATCGTTTCAGGAATTACAGGATGCCCGACCGAAGCGCTGCGT
ACGGATCGGCTGGATGGAGATAATCAAACGGTTATGAAGATGACGAATCATTAAAAATAA
TATAGCGGTGAACGGGTAGCGTTGCCCATAATGCTGTGAATCCCTGCGCGTGACCATGCC
CTGTAACAATGCTGTGAACACTGAACCCTTGCGTGTTTCCTTTGGTTTCTTTCAAAATAA
GCGTCTTAATTTTCTACTAAATGTTAATATAAAGTTATGTTAAGATTAAAACTCTCATTT
GATTTGTACTCTCTTTGTCCTAAAATAAATGCCTTAACTTTTTACTAAACGTTAGCATAA
AATTGTATTAAGATTGAAACATTTATTTGGTTTGTACTCCCTCCGTTTGAAAATAAGTGT
CTAACTTTTTACAAAATGTTAGTCTAAAATTATACTAAGATTAAAACATTTATTTTAAGT
TTGAGAGAGTAAAATATTGCAGAAGATGCTGAACGAACATCCAATAATTGTTTCCGATTG
GTTTGCAATAAACTGTTTGTAATATTTTCTTCCTTGGCCCAAACCCAAGGGCATTGTTCT
GTCTGTCTCTGTGATGTGTTTATTCCAAGTGTTGATTACTAGTTCTGCAGCAGATCAGCA
ACGTAGAGCCTAGCAGACCACTTTATATGTACTCCCTCCATCCCATAGTGTCAAAAACGC
TCTTATATTACGGGACGAAAGGAGTACATTACTACTGAGATGAGAGGTTGCCATCCTAGG
CTTGTATATTCTGATTGCCCTGCCAAGGATCAAGAGGCTGAATGGACCAAACGATGAGAG
GTTGCCATCCTAGGCTTGTATATTCTGATTGCCCTGCCAAGGCTCAAGAGGCTGAATGGA
CCAAACGAACACACCCATCGGAAGACGTCGACACAAACTTACTCTGCATCCAAACCAGTT
TTAACTCTAAAGGGAACAACTATACGACGAGATCAGCAACATATATATAGTCAAGCAGAT
CACTTTGTATGTACATTATTACCAAGATCTGGGCTGAATCCAACAGCGAGACACACAATT
GTCCAAGATAATGCGAGTAGTATACTTCCACCACGTTCTTCACTGAGAATCACCAGAATG
ACACCAAACAGATATATTGCTCGTGTGCACCACATATAGATCGTTGAAAACACATGCACT
TCCCAATCAGGCCAAAGCATCAGTACGTGTTGTCAGCGGGGCCGTGGTAGTTTCTCCTCC
TAAGCTGGGATTCTGCTGCAGGCTGCTGGAGGAAGATCTTGGTAGGATCATGTGGATCGA
CATACCTGTAAACATGAGAGAACCTGTGAGTTCACAGCACAACAGGGGAATAGCTGGGAG
GAGAAGACTGGGAAATGGCAGATCTTGCACTCACGCATGGCGCATCATGTCGTCAACAGG
AGTTTGCGCTGCCTGCATGGGGTCCACACGGGGCACGGTAGCAGGCTGGGCTTCAAACTG
ATTGTGGCGCCGCACTGACGTGATCAGGTTCAGGAAGAGTGGCACAAAGGTGCCACATCC
ACCTTCCTTGAACAAGATCTTGAAGGTGTGGGTGGAGTACAAAGCCCTGTTCTGGCTTTC
TGGAACAACCTGGATTGAAACCCACACGGTTAATATCTTCGGTGTTTGTTTAGGAATGTA
GGATGTGCAAGTATTCGCCGATTCGATCATGAAATGTTCAGTGACAAACAACTCACCGGC
TCAACAAATCCAGAGATATTGTTGCAGTGAAATATCGGCTGGTTGAACTTCTCACCGTGC
ACGTACAACTGCAAACATGTTTGCCATGTCAGAGAATTTACACATTTTGCTATGAACTCA
TGATGTAATGAAATAATCAAGGAGGCAACATCAACTGTTCCTTTCAGATTCACAGGGGAC
AGGATTAGACAACTTTCATGGCCCATTTACTCACCAGAGGCATATCGAAGGCAAAGAAAT
TCCCAATAGGCTTGGCGGCGACAAACACCATCCTTATGTTAGAAAGGTATATGGTGCCCT
TTGTTTTTGCGTGACCGCCGGGCGCCCTGAGAACAGGCGAAGCAACCATATGAGACTGAT
GATAGCATCCAGTTAGTTATTTTTCGTGCAAAGTGGTGTGTAATTTAACGAGATAAAATC
CCAAGCTGAACATAATGAGAAAGCTTTCTAAATGAGCACAAAATGAAAGCATATTCCTTA
TCTAATTCTTACACAACGAGAGATAAATGGGTGCCGCATTTGTAGCTCACGACCTATGGA
CTGCGCCACGGTGTTTCCACCGTATTCCGTTCCAAAATCCCAAACCTTACAACATGCAGC
ATTATATTTCTTCTAGTCACCTAGCAGTTCCAACCAAGCGTTCCAAATTATGTAGTGGTG
GTAAACCACCACGCATCACAAGCACATAAAACCTTTCGAACTTGAATGTTTTGCAACCCT
TGAAGAAGACAAGGATTAGCACGAGCACAGCTAACATTCGTCACAAGGCGACATGTCAGC
CACTGAAGGGCAGAAATTCCCCTCGCAAACCAAGGGCTCAACTCGATTCGGGCCGCCCGC
TCCACCCGGAACCTCAGACGAGCCGATTCCTGAGAGCTGCTAAAGCCATCCCCGAAGCCA
GCCAATCAATCCCCCCACCGTTTCTTCGCATCCAACCCTAAAACCTAATCCCCAATTAAA
ATCCCCATCCATCCGGATGGCGCGGTCGCTTGCGATGCTAGATCGAGAAAAAAAGAAAAA
GCGATTAATCTGCCCAGGCGAGGCGAAAGCAACCGGGCCGGGCGAGAAGAGAGGAGGGGC
TACGCACGAGGGGATCTTGTCGACGTGGAACTCGACGCCGTCGCGGGCGAGGACGAACAT
CTCGCCGTGGAAGGGCACGGGCATCCCGTTCCCGAACAGCTGCGGGTTCTCCGCCATCTC
TCCGGCCTCCGGATCCTCTCCGCCCGCCTGCTGCTCGAGCCTTCGTTCCTTGCTCCGCCG
CGCCGCGCCGCGTCGCCGGATGGATCAGGGGAGCGACGAATGGGTTGGGGCTGGGCTGGC
GGGCGTGGCTGGGACGCGGTTTCCGATTCCCGGGAGGAGGCCTGGGTCTGGGTGCCTTGG
TAGCGAGGCGAGGCTTGGCTTCTCGAAGCGGTCGGGTTGTTTGGTTTCGTTGCGATTGCG
AGTCGACTATGGTATGGTGGTTTGCTGGGCTGGGGCTGGGTGGTTGGGTCGGACGCGTTT
ATGCGCGAGGGGATCGATCGCGTGCACTGCTCGATCTCTCGGGGGAGGCGCGGAGAGTTC
CAGAGGCCGGTCGAAGCGTGTGGCCCCACCGCAAACCCGTGTTTTATACTATAGCCGAAA
AATGTGAGTTAAGGCCTCCTTTGCTTCAGTATAACGATATCACATACTCCCTCCGTCCCA
AAATTATTGTCTTAAATTTGTTTAGATATGAATGTATCTAGTCAAGTTTTAATATTTAGA
TACATCCATTTCAAGAAAAAGCTAAGACAAGAATTTTGAGACGGAGGGAGCACT