Contig Data
morexGenes
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Map Locations of contig_1568576 (4646 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1568576

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14641 1 233 bp MLOC_14641.1 Available Available None
MLOC_14642 1 367 bp AK376053 Not available Available None





CDS Structure of MLOC_14641






CDS Structure of MLOC_14642






Contig Sequence (4646 bp)

>contig_1568576 4646 assembly3_WGSMorex_rbca.fasta
TAATAAATAATTATCATGAACAAAGAAATANNNNNNNNNNNNNNNNNNNNNNNNNNNTAG
GGCATATTTCCAACAAAAATATCGAGATATATCCTCCAAATAAAAAACTCGAGTTGCAAA
ACATGGACTTAGAGTCAAGTCCACGACCACGGAATATTTTTATGCAACTTTATGTTTTAT
CACAGTCCTCTATGCGCTTTCCGTGAGTGATCGACAAATTCTAACATTTACATTTTTTGT
TGTTATTCTTGTAGTAGCTTAAAGTAAAGTAGCATGTGTGATGAGGAAAGTCGACAAGAG
GACCACAGCCAAAACTGCTCTGAAGATAACTGAAGAGCGTGCATTACATGTCTGTCAATT
ATCAAGTTCATAGGAAGAACGAGATAGATTGAAGCGGGCGATACAAGTCAAGTTGGACCG
CGATGCGGCCGTCCACGTTACCATTTTATTTGAACTGGTACACGGTAGCTGTAAGCGATT
ACTCACGGGTACTTATCCGCTGTAATTTTCTGAGCCGCTACTAACAGGCGCTACGCGTAA
AGAAGAGATTAAGAAGAATGTAACGCCCCACAAAAAAAGACTAAGAAAAATGTGATTTAC
GTGTAATTTAGCCTACAACTATGGCTAGCTCTTCAGGGCCTGCTTGGAATCAGTGTAAGA
TTTTATCTCCGGATTTAATTTACACGCGTATAATATGAGCCGCAGCTTGATTTTCGTCTG
AAAAAGAAACGACGCCTAGAGGTGTGTAAAACTTTTACGGGGATATTCAGGGTCAAATGA
CAATCCAAGCAGAGCCTCACTGGTCGAACCTACCGTTGGTGACAGAAACAGACTATGCCG
AACTGATGCAACTGATTCAGTCGAGGGACGTTGATAGATCGCGTTACACGTATCAAGTTA
ATGAGATCAGGATGATCCTTGCTCATGAAAGGAATATTAGTCTAGCTAAGATCAGTAGGC
ATGCTGATGCTGCTAGCCACACCCTTTACCTATATAGGACACGTGCAACGAGGAACTGCT
GGTTGGCTAATGAGATAGCTAGCATATTAAAATCTGAATTTAATCATCTTATTTGATTAA
TGAAAGTTCGTACTCCAAGAAAAAAAACTATGACTAGCTACTTTCTCTCCAAGACTGGGT
ATATGTGAGTAAAGCTAGTACACAAAAAATTATCACCAATTCGGGTGAGGCTTCATTGAA
AAAAAAATAAGAATGGAAAAGGATTGGTGAGGTCTCGAGGGAGCTACGCGAATCGGACCC
CACACAACTAAATTGCGTGTTTTGATTCTTTTGTTGAAATAAATAGACATCTCACACTAA
TTTACAAAAAGTCAGAATTTAATCATTTTTCTACCGCCAGGCCCATGATGGTAGGGTATA
ACAACCTACCGTCAAGGTCCCTGACGGTAGAGTTGCATGTCTATCATAAAAATTCCTAAA
TTTGCACGTACGCATCCTACCGTCAGGCGTCTTGGCGGTAGGGTTGCATACGCTATTGCC
AGCATCTGCGACGATAGAGGTGCATTGCGCCGACGTGTTCACTTTTGCTACGGACCTTGA
TGGTATGTTATTTTGTCATTGTCCCCAATGATAGAAAAAGGACTAGATCCTAATTTTTTT
GCAAACGAATATCAAATCTCGATTTACTTTATTAAAATGGTAAAAACACGAAATTTTACC
TCCCCACAATCGAGATAAAAGCCGAGTAGAAAGCAGAGTCCAATTTTCCATCCGTACACA
CACAAGCGATTGTTTAGTACTCCAGTCAAACTTGGCGGTAAAGAGAGGATCGATCACCGT
GGCTTGCTTAACACGGAGAGAGGAGGAGGACCCATGCTGGAAACGAGCCCCCGATCGAGC
CGGACTTTCGGCCTCGCGGTTCGTGCTATGGAAGAAAGCCAGCCAGCCTCTTTGACGATG
AACGAACCATGCCAAAGAACAACAGCGAAGAGGGAAGAAAAAGAGAACATAAATAGAGCT
GGAGGGATAGAATACAGTACTGCCAAGAGGGAGGCAGCGCCACGTGGTGGGGTCTGGTGG
ACAGGACGTACGTACGTACGTAAGTGGGTGGGTGCCGGAGCTACCCGTGTACGTATACCG
TACGTACGATACGTGCGTAGGGTAGGAACAATGTATACGATCTGACTAATAATAACTGTC
TGTGAAGAAGTAAGTATTATTGTGAGCAGGTGAGGAAAGAGATGCCGGTGCTGCATCGGT
CCTCCAAAACCTCATCTTGGTCTCAAGGTGGTGGTGTCCGCAAAAGATCGGACAACAAAG
CTATTCGACCGACCGGACCGGGGGACCCATGCACTGACTTCACCAGCCGTCCGGCTCCGT
GGAATGATCATGAGCAGAGAAAATAAATGCCGGACGGCCACAGAACTGTGCAGGTATACT
ACTCAATCCGTAGTTTTAAAGATTTCATTAGAGGACTACATACGGATGTATATAGACATA
TTATAAAACGTAGATTTATTCACTTTGCTTCGTATGTAGTCCACTAGTACAATCTCTAAA
AAAACCTATATTTAAGAACGGAGGGACTACTCAATACTGTGAGTATACTGTATACGTAGT
AACATTTTTTGTCGTACACTACCCAATTATTGATGCAGTATACTGTATAGTAGGAGTATA
TACGTAGTAACATTTGTAACTACATATGCATTGATGCATGCATGTTCGGCCTACTCAATT
ATTGTACTCTATCAACTGTCAGCAGGGAGGCTTAAATCGCGTGTACCAACGGATCGAAAA
GTAATTTAGTCGGAAACATTACATGTCCCAGCCAACTACTGCCCCCGACTGACCTACTCC
ACGTAAAAGAATCGAGCACAACTGCATGCATGCTCGTCCTACATAAAAGAATCTAGTACA
ACCGCATGCATGCTCGTCCTACATACAGTACTTATAAAGCAAAATGAGTAAATTTATATT
TAAAAATATGTTTATATACATCTATACGTAGTCTAGAATGAAATCTATAAATGTTTTATA
TTTTAAAACGGAGAGAGTAATACAGTACTCGATGTTACTCCACCACAAGACGATGTGCGG
GGGATCAAATTCCAGGTCGGTCAGGTCGGCCAAGAACTCGTGGTACTACGCGCGTACAGT
ATACCGACAAGCGTCAACCACCAGGTCAGGTTGGCCGTGCATGCATGCGTCGTGTGCACG
TATCTCTCGAAAATAATGCAACATTTTCATCATCTTCCTCCAAGAAGTTAAACCCAACGT
CGTGATCGGGGGGTCTCACCCGCCCAGATTTTCCGTCTTCGTCGAGGCGCAGCGCAGCGA
CGACAAGGACGTGCACATGCATGCATGCACCCATGCACCCACCCACGCTCCGTTCCGTTT
ACTCTGCACGGAAAAAGTGTCGGCGTAATGATGCCGCAGCAGAACTGCATGCAGATGCAG
GTAGCCATGACCCGTCGGAGCCTGAGCATCTGGAGGCCGGGCCGGGCCGGGTCGGGTTGG
ACCCCAGGTGCATTGAAGCGCCCACAGTAACGGTCACCAACTAACCCAACCTCATTGATC
GAGTGACCAGGACGCACGGGCACGGTGCATGACACGTCCGTCCATCGTTCTTGCCATCCC
ATTCATTCCTCCTCGTGATCTCATCCACATCCACCCGGCGGGCAGACAGCGCCATGACTG
CCCCGGACGCCCTGGTACGCACACTGTCGTCGCCATTACCATAATTGAAGAGACCCCACC
CCGCACCGGCTTCGGTACGACCCTACCTCTCGTGGTACACGAACTAATTACGGTGCGTGG
CGTGGCGTCGACCTATGCGTGTACCCTGCTGGAGTACCACGCCGTGCAAGGCTGGTAAAT
GAGAGCAGAAGCTTCCTCCGTCACAGCTCAGAAACGACACGCGTATCACGGTGTTCTGAT
CATGCAGTTATTATTAGGGAGAGATATACACATGACATGAGTCTTCCTGGATCCTTTCAG
AGCGCTGTGGTAAATTTAAGATTACACATGTTTGCCATGTTGGAAAAAGGCGGGAAAAGT
GGGTGGACAAGTCAGCAGCGGCATCATGGAAAGGCCAAAGCAGTGTAAGCAGTCGCGGTC
AGCAGAGCACCTCGCATTGCATGCAGCATCAATCCTCCGGCCAGGCTAGCATTCTATAGA
TTGACACGGGGGCGCATGCATGCATGCAATGCAATGCATTAGAAAAGGATGAGCATGTGA
TGCGAGGCCGACGGGTCACCAGCAAAGTTTATGACCAACAGAAACGGAACCTTGGCACAA
ATGCGATGCATCCATGCATGCTTGGTAGTAACAATTTCTACTGCTCCAAATTGGCCAAAC
AAAGTGCAACAACAATCTTTTTCTTTTGTTGAAAAAAAAAGGGGCAACCATGAACAAATT
CGTTCACGTGGCAGTAGTAGAAGCAGCACGCACGCACACACATCCATGGCGACGGCGAGC
TCGAGCCAATCGACACAGTGTTTCTCGACACAGTTACACGCACAGAGCTAGACGACGACC
AGACCAGAAGGACGCTAGACCAAACCATCCATGGGCCATGGCTACCCCATCCATCACCGC
CAAAGCAAGCACAGGCTGGCATTAGAGCAAGTACAATAAGGTACNNNNNNNNNNNNNNNA
GGATTAAAATACTATATTTTTGCTGA