Map Locations of contig_1568573 (5692 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1568573

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14640 1 5105 bp AK250909.1 Available Available None





CDS Structure of MLOC_14640






Contig Sequence (5692 bp)

>contig_1568573 5692 assembly3_WGSMorex_rbca.fasta
TCCGTTCCTAAATATAAGTTTTTCTATTAAAAAACTACATACGAATGTANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTTGCTTCGTATGTAGTCATCTAATGAAATTTCTTAAA
AGACTTATATTTAGGAACGGAGGAAGTACATGTTTAACATCTTTAAGACAGATGATTATT
TTTTTTGAAAATTAATATGTTTGCATGTATGTTTTTTCATACAGATTATACATTTTTATA
TACATCAGGAACATTTTTTATATACATGTTTAACATTTTTCTAGATAAATGATTATCATT
TTCAAAACTTAATTTTTATGTCTACTTTTTCCTATACTCATTGTACATTTTTTGTATATA
TTACAAAAAATTTCTTTATACACAGTTAACATTTTTCGAAAATGTATGTAAAGTATATTT
TTGTGGTACATATGTTTAGAAATTTCATAGTATAAATAAAAGTAAAAAAGATAAATCAAA
AACGAAAAAAAAAGAGGTATCGGACTCCCGCGCGTCGAGCGAGGTGTTGCCTCAAAAAAG
AAAAAGAAAAAGGCGACGACTGAGGCCCAAGACGAGAGGGTTGAGGATTTTACAAACACA
CGCAGGGCTTAAAAGAAAAGATGTTCGTTCTTGTTCAGATAGAAAACCCCAAGCGCTGGG
TAGGAGGGCGAAATTAGGATTTAGGGGGAAAGTAGAGGACACTTGCAGATCGAAGAAAGC
AGAGCCGCCGCCGATGAGCGCGACGGAGAAGAGCACGGAGGGGGAGGGTGCCCAGCGCGT
GGAGGCGTTCCTCGACATCCTCGACCGCCTCCCGATGGGGGAGGTGGAAGCGGCGCTGAC
CTCCTGCGGCGTCGGCCCGACGGCGGAGGCCGCGGAGCTGGTGCTCAAGTCCGATACCTG
CTACTCCCGCCCCAAATCGGCCGTCCGCTTCTTCCGCTGGGCGAGGGAGTCCGTGCAGCT
CACCCCCCTGGCCTGGAACATCCTCGTCGACATCCTCGGTAAGGCCGCCATGTTCGATCC
CATGTGGGACGCCGTCCTCTCCATGAGCCAGGAGGGCGGCGGCCTCCTCTCCGTCGCCAC
ATTCGCCTCCATGTTCGCCTCCTACTGCGCGCGCGGCAACTTCAAGGAAGCCGCCATGGC
CTTCGACGTCATGGAGCGCCACGGCGTGACCCCGGACGCCGTTGCCCTCAACTCTCTCCT
CGCCGCCATGTGCCGCCGGGAGGGCGGCGGGCAGGCCGCGTGGGAGCTTTTCGAACGCTA
CAAGACCACGGTCGCGCCTGACGCCGACACCTTCGCGATACTGCTCGAGGCGTGGGAGAA
GGAGGGGAACGTCCAGCGCGCCAAGAGCACCTTCGGCGAGATGGTCGTTCGCGTCGGGTG
GGACGTCGGCAACATGCCCGCCTACGATGCTTTTCTCTCCACGCTCGTGCGAGGGGACCA
GTTCAACGAGGCATTCAAGTTCCTCCAGGTGATGCGGACCAAGGGCTGCCTCCCGGGGCT
CAAGTTCTTTGCCAACGCCATCGACCTTGTCGTCCGCAAGGGAGACCATGCCAATGCTGT
TGCTATCTGGCAAATTATGGTCTCCGATGCAGGACTGCTTCCCAATCTCCCAATGTACAA
CGCCGTAATTGGCCTCTGCTCTAGTGTCGGTAACACCGACTACGCCTTCCAGATGCTCGA
CGAAATGCCCTTCAATGGGGTCTTTGCAGATTCTGTTACATATAATTCCATACTTGAGGG
GCTCATCAAGCAGCGCAAAGCTCGTGAGACTGAAAGTTTCCTCGCGGAGATGAGCAAGAA
CGAGCAGCTGCCCTCCGCCTCCAACTGTGCTGCTGCTATCAGCTTATTTTCTCAGGAGTT
TAACCCATCTGCCGCAGTTGACGTGTGGCACTGCATCGTGGAGCACCAAATTACTCCGGC
TGAGGAATCAGCCAAAGAGCTAATAGCTGGGCTTCTTGACTTTAGCAGATTCGCCGAGGT
GAAGAAATATACCGATGAGATGGTTGACATGGGAATTGAGTTGCCCCAGCCCACCATTGA
AAAAATGAAGCGAGCATTTTACAAGGCTGACAGGCACCATACATATGACCAAATTGCAAG
AAGGTTGAAGCGGCGGTAGCAACACATCGATGGTATAATTCATCAGGTATGTCTTCTTTC
ATTTGGGCGACACTGGTTGTTTTGCTGATTGCCATTTATTGTGTGAAACCACTAATTTTC
ATGACATTATGTCACTTTCTCATTAGGCCTCAAGGTAACTACTTGGAACTATTATTCCAG
ATTACTACTTTAGTGGCCTATATATTATTAGCCCTATCGGCTATATATTCATTTTGAGAA
ACCATGAGGAATCGTCAGGCTCCACTGCTTGAAATTTTGTTCGAAAGGAGAGGCAGACTC
TAGCAATTGCATTGCCTAATTTTGTGGAGTCTGATTTTTTCTGCTATGCCATGAAAAAAA
CAAACTGATTTTTCTGACTGGTAAACACACATAAGCATGGATAACCCAAGATGGCAATTT
TGCCCATGGGTAATCCGCAATTTGTCCCCCATGGGTAGAGTATGGGTACGATGCTTTGCC
CTTGGCCCTTGGGTAATTTGGTTAGGCAATATCCAACGACGTCGCTCACTCCCCCATGCT
TATCTGAACCAATCTTTCCAAACAAAAAGGGCCTCCAACGGGCTCCCCTACTTCGGCCCT
ATCCGTTTGACAATTAGAAATCCCCTACTCTATTGTCAAATAAAGGGGAGTAGGGGAGTC
CCGTTTGTCCGCAACGTAGGACGCGTACACATGGACCCCTCTGCGTCCTCATTCCACCCT
TCCTTTTCCACTCTCTTTGCTCGCGTCCCATCTCTCACTTTGGCGGCCTTCGCTGTTACC
CCACCTCGACGACCGTTGTTGCCCCCTAGTTCGACCACCGCGCTCCCACCTCGACTTGAG
CCCGCTGGCCGAGTCCATCCTCCACATGGACCTGTTTAGCCACATGGATGTGTCCGACAT
GTACTCCAAGATGTCTGAGGCACTGTTGGCCATGCCGAGGACGAACTTGGAGAACCTAGC
ACGCAAAAAGCACCGCACCAAGCAAAAGGCTCAAGCGACAGCTCCTCCAGCTCGCGTCCA
TGCCATGCTCGTGCCTACACTCGCACTTCTGTCCGCCCAAAGAAGGAATAGATGAAATTC
ATAAGGAGAGGTGGCAAGTGCCAATAGAGATAGAATGAAGGAAGAAAAGAAGGACAAAAG
GTTCACACATTCATGGAGATACAAACAAAGATTGTTGAATTTGAGAATGAGGAGGATAGC
ATTTGAAAGAAAGGAAGTTGGACTGGCAAGATTCATCGAGAAGTCAAGGGTCTTGTTCAC
CAACGCTACCATCATGGATGCCGATGCGCTCAAGTGGGTTCCGCCGGATGCCTAGCAACA
TCAATGCACGCCATGAAAATGGTAATGTACATTGTTTTGTTTGGTTTGTTCAATCTGCAT
CATGAACTTTGATTAAATTGTTGAATTGTTTGTCATGCATAATTTATCTTAAAATTGTTT
GTCATGATATATCCACCGTCCTTGATTGTTGCAAATGGATGAAAAATTGAGTTTGAGAAA
ACGAGGGCAGGGGGATTGGGGGCGACGTTGTTTACCACTTTGTCCCCTTAGTGGACACCA
TTTGGCCAACGCCCTTGGGGATCCTCGTAGTCATCGGTTGGACACGTGTCTAATTTGTTT
GCAACCAGTTATGCGGTTAATATTTAAATAATAAAGTAAATATATTTTGTTTCATATGAC
ATGTGGGCCATCATGGATGTATCACATATATCTGTGAACCTTGACTCATATTGTACTATT
TGTACATGTCGAGATGAGCTGATGGGTACCGACGGACATGGATACCCATCGGGTTTAGGC
ATAGCCGCATAGGTATGATTGTCTCGCCATGGGTGGGCGATGAGCACCCACGGGTATCGC
AGACATGGATACCCATCGGGTTTAGGCATATCCGCATATGCATGATTGTATCGCCATGGG
TGGGCGATGAGCACCCTTGTGGGCATGGGTTTGATATTGCTCATCGTGCCAATTCATGTG
CGTGCTTCACTCGTTTACCCGCCAACTTGTATTTTCTTATTGACGTACGGAACAAGGCCG
TTCTCGTGATGTCTCCACACCATGTCATGTGACCGGGCTGCTAACTCCATGGGGATATTG
TGTACTGTGCTCTTTACCATCTACGGTGACAATGTGCTCCCTATCTTGTCCGTGTCATTG
CCTCACCTGGCATTGTTGATTCCTAGAACCATGAATCCACAATGACTTCACTTGTTTGTT
TTTATGCGTCATTCTTGCGTTGTAAACAAACGACCAAAATTTTCTTCACAGGACCAACAC
GTGTGATTTCTAGAATCCTTGCATTCAATTTTGTAGTTGTGTTGTTCTTGGGTAAAGAGG
CTTCAAGGCATGCCCATGGGGAGAGCCCCTCCTATTGATAAGCATGTCAAGTGTCTATGC
TTTGTCCGGGGAATGCATGACTGACACTTTCATGTTGTCGATGTTTGTTTGCAATAATAA
TTTCCGACCGAAACCGTTTTCGAGTCCGTTTTCATATGAAATGGCAAGAGCTTTTTGACA
TCCGAACACAATCCGGTCCGAATCCGAGTCCAATTGATAGGATATGGTATAGGATAAATA
TACGATGCCGTAGGATAATCCATTTTCCTACTCAGATAATCCAATCTTTTAAATATGGAT
ATACAATTTATGGACGAAGAAGTTTTATAAGTATTTAATAGCAATATGTGAATGTTATCT
TAACTTATGAGATGAGACATATGCTTTTTAGTGATCTATTTGGCTTATTTTAGTATGTTT
TAGTGCTTTATGTGTGCTTAAAGTGTATAAGTATTAATACTTGCTCATTGTTTATTTGCT
TTAGTGTAAAGCATTTATGTATTTCTTGTATATGCATGTGGTATATGACCGTTTTCGATC
CGAGTCCGTTCCTACCTTACCATGTTTGAATCTGCATCATTCGGTATTTGAATCCACATC
CGCGCCGCTTCCGAATCCAAAAGTAAATATGCAATAGGATAAGGTATGAGCATTATCCAT
CCGAATATGATTCAGTTTCACCCCTCTAAGAATAATACAAGGAATGTACGTAGATTTGTG
TGACAGGGGGTCTTCACCTTAGGTTACTAGATCGACAAAGACATAGGCTTTACCCAGGTT
CGGGCCCTCGCGTGGCGAACTGACTAACAATAACCCTACTCCTGCCTATATAGGATTTAT
ATCCAATAGAGATTACAACCGGGTGCACAATGGCGTGCCCGGCGAGTTGGAGGCTGAGTT
ACCAAAGTTGAACGTGGACGATCTAGGCGGAATGTCTAGATTACCTTGCTAATTAGCTAT
TCTACGCTTCTAGGGTTTTTGGAGTCGAAATAGTCCTTGTCCTATCCTGCAAGTCGAAAA
AGTCCATGATCTTAGTTGGTGGCCACCTTCTTCATCTCCATCATCTTGATGCACACGCCT
TGGACTCCTCCCTATTTTGTAGGCGTATGACTCCATTTTAGGGAGATTCGGGGCGGCATG
CCCAAGGGAATCAACCGCCCAAATACGGGACCATCCTGTTAGGAAAGCAACTTATCTTTA
TTGAAGGCCCAAAGGGCATATATATATTACACATGACTTGAGGTGCAAGGAA