Contig Data
morexGenes
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Map Locations of contig_156850 (4890 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_156850

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14613 2 705 bp MLOC_14613.2 Not available Available None
MLOC_14614 1 1579 bp MLOC_14614.1 Available Available LOC_Os06g10440.1, FRAME:-1, EVALUE:5e-57, 13106.m01132 protein gb protein, putative, expressed





CDS Structure of MLOC_14613






CDS Structure of MLOC_14614






Contig Sequence (4890 bp)

>contig_156850 4890 assembly3_WGSMorex_rbca.fasta
ATGTACATAGACATATTTTAAAGTACAGATTCACTCATTTTGCTCCGTATGCAGTCTCCT
AGTGAAATCCCTAAAAGGNNNNNTATTTTGGAACGGAGGGAGTAGAATAGAAGGCAGCAA
ACCAGGACTTCTGTTAAGTTTGAATTTTCTAATGCTGAAAATGCAGAAATCCCATGTTCA
TGACCCTAAATTCAACCATTTTTTTATTACAAAATATGTTCAGCCAGTCACACATTCGAA
CAGGTGCCTTGGGAGATGGCGTTTCATTGCCTTTGTTAATATCATTCGTTTGAAAAGAAG
TAAATATCGTTTGATCCTATTAAATTCAGTAAATACCCTGATATTGTTCTTGGATGCTAC
ACACAGCCTTTGTTTTTGAGTTGCTCAACTAGCCAATGAGTCGCACTACCAAGGTCGACT
CAACCTCTTGACTCGACTCTTAGGATGAGTCGAGCGACTCGAGCGACTAGTCACGACTAG
TCGTGGTTTCTGGGTCGAACGACTCATTTTTTTGAGCCCCACCTGTCATGTTTTTTTACT
GTATTTCCTTGCCCATCCCCGCTGGAAATCTAGATCAAACCAGTCCCCCCCAACCCAACC
CTCTCCTTGGCAACCGCTGCCACCCCTGGTTTGCTGCTCGTCCCATCCTCCCCTGGTTGC
TGCTGGTGCTGCTCGCCCCCTCCCCTGCTTGCTGCTGCTGCTCATCCCCTCCTCCCCTGA
TTGCTGCTGATGCTGCTCGTCCCCTCCTCCCCTGGTTGCTGCTGATGCCGGTCTGCTCCT
CCCCTCCTCTCCTGATTGCTGCTGCTGCTGCTGCTGGTCTGCTCCTCCCCTGGTTGCTGC
TGCTTAACTCACGTCGACTCGTCGATCATGAGTCTAGAATAGTCACGACTAGTCTAGAGT
AGCCCCCCCTGAGCGGCTCGTCGACTCATCGACCCAAAAACCTTGCACACAGCTATTTTC
AAAAACGATATCATGCTTGAAAGACAGGTTTAGCTAATTAATTTCCTTTAGTGTTCCTAT
CCGTATAGAATGGCAGAATTTTTCTCGATTAACTTATCATTCCTGTAGCAAGCACCAAAC
AGCCTTTACTCGTATAGAGTTTGATGTGATTATACTTTATTTCAAGAGGAACTGGCGTCA
ATACGCCGAATTCACTCATTCTCATGATTAACTAATGATGACCTCCTTCACTACATATAT
CTTCTAGCATTACAACCACAAAATACTACAGGTTTATAGAGATGTAAGAAGATGCATCGA
TCTATAGACTAACATGAGAAAACTGCATCTAACAATCAACACGACTGAACTGAATCAAAA
GAATACTTCCATAGTTCCATACCAGCACCACATGAACCAAAATCAAGACTTACCCCAACA
AGTAAGTGCAGCCACTTGGGCCCCTTGACATGCTTCTGGACAAACGGGATCCCTGTTCCA
AAAACCAAAAACATTCAATTTCTCATCCAGAGCACATTGACTAACAACTAAATAGTGGAC
CGAAATAATAGAGCGAACCTGTATTAAACCCGTGCACCGCACTGAGCATCGCGCCGGCGC
CGGAACCAGTCTGCAGCAACAGGGCAGACAGAGACCGCAAGGTAAGCACACAAGTTAGCG
ATCAAATCCCCACGATGACGGATCTCGGGCATGCATCCGTCCGTGGAAATTAAGCAGCAA
GGGGGCGAAATCGCGTTACCACGGCGGTGGCGTCGTGCAGGACGGAGGTGATGGCCCAGT
CTCCCTGTCCCTGAGAAAAAGAATAAGCATCAAGTCAGAGCAACCCGCGGGCGGATGGAG
GAGGAGGGGGTCGAGGGGTACGTACGGAGTTGGTGGTGGGGTTGAGGAGGGAGAGGCAGC
GGGGGCAGCGGGCGGAGCCGAGGCCGGGGTTGATTGTGGGGTCGCGGTGGAGGTGGGCGC
CGCTGCGGAGCTTCTCCTCGTACACCTCCCGCGTCCCCATGTCCGCCGCCGGTGGCTGAG
CTAGGCCTGGCTTGGGGAGGGGGAGACCAGGACGGTTTTGGGTTCCGGGGAAGAACGTGC
TGGACTCACGAGTCCAGAGGCTCCTCTCCTTTCGTTTGACACGGGCTGGAGGCGTCGGTT
ATTATCTTGGTTTGCCGGGCTAGGCAAGCCCAGGGCCCAAATAGATATAGTCCACGTGTT
TATTTAGCAAATAACCAACTAACGGAGAAATTAGTTGACGAGCGTTCCTTCGAAAGCCTT
CCAACGATCATTTTCGGGCGTCGTCACTTGACGCGTTCTCAGCCGTCGTCAGGTATCGTA
TTTTAAGCATTCTTTTTGAATTTTGTTTTTCTCTTTTTTCGCGCATCTTTTCGGCTTTTT
AGATAGATTTTTAGGGTTTTTTTCAGTATTTTGGTTTGTCACGTGTCTTTCTTAGCTTTT
GGACAAAAAAAATACACAAAAAACGTGCTTTCTTTTACTTTTTTAAAATGATTTTTCTTT
CGCGAGAGGCACGTATTTGCTTGTGCCTCTCGGAAACGGAAAAAAAATATGGTTTTTGTT
TCTTTCTTATGCGAGAGGCATAAATTTGCTTTCGTAAGGGGCATAGCCGTGTCTCTCGAA
AATGAAAAAATAATATTTTTATGTTTTTTCAGAGAGGTATAATTTTGCTTAGGTGGGAGG
CACGGATTTGCTTTCGCGAGAAGCGTTGTCGTGCCTTCCAGAAATAAAAAAACATTCTTT
TTTCTTTCGCAAGAGACACGGTTTTACTTCTGCGAGAGGCATGGCCGTGCCTTTTAGAAA
TGAAAAAATGTTATTTTTTCGTTAGAGGCATGATTTTTTCGTTTGCCTTTTTTGGTTCGG
TTTTTTGTTAAAAGGAAGTTCATTAAAACCTATCAACACGGGATTTAGTTTTTAAATTAT
TGATGCGTGAAATCCAACGATGAAAACTGTTTGACAATTGGATGCACGGTTTAAGAGATA
AAATCTTTTGAAAATAACGAATCTAGGAAAAAAAACTCCTAGGTTACGACAAGTAGCAGA
CATGCAGTGCATCACTTGTCACAAACTGAAAAGGTGAAAATGATCTTTAAAAGGAGTACT
CTTCAATTTAGTGATTTTGATCAACTTCAAGTTTTTTTTCAAAAAAATAAACTAGAGGAT
CATCGTCCCAAGCACAGGAAATTTTATTCAAAAAACTATGCTTAGCTAGCTCATGAGCCA
CACCATTGGCTTCTCCAAAACAATGTAAGAGGTCGGCCACCTCGGTCATCGAAAGTGCAT
CAACACATTTTGCGTTAATTGCTGCACATGGATCGCACCATCGAGTTTGCCCCGTGCAAA
AATTAATATCTTCCATCTAATCATATTCACCCATTACTCTACGAGACCCCAAAGATTAGC
AAAGATCAATCCCTCTTTCATGGCAATTGCTTCCATCGTGACTGCATCTACAACATGCAA
ATATTAGATGCATCTTACAGCTAAAAATTTCCCAAAGAAGTCTCAGATGACCGCAAGAGT
AGGCCTCGTTAGTGGGAAATGTAGTAAAAAAACAAAATGATCGCATCTATGAATAAAACC
CAACAACTTACCCACAAGGTAGATCAAATATTTACCAATCAACGCGACAGAGAGAAGAGG
TTGATGAAGATGTTGCAGATCCCCATAGCTAGTTTTAAACCTCCCAACCGTGAGAATTTT
GTTGATCTACGATCGAAGGTATGATCCCTCTATCGATACCAATGCATGCAGAGTCACCGA
TTCAGTAGGGCTTTGCCATCATGAACGAACATCTACCGAAGACTAGGAGAAAGGTGGGGC
AACCGGGCAGCAGAGATAACTTTTAGAGAGAGTGAGGACGCAACCAACAAAGCACGAATG
TGTTTGAGAGTTGCCCCCCTCTTTACATAGGCGCAAGCGGAGCCAAGACTTGAGGAAAAG
GCACGGAAACCTTTTGCTATCCAAACTGGATCTCAAATGGAATCATTTGGTTAGATGTAA
ACTTATGTGAGCTTTTTTGGCTTTGGGACGAACTTTGGGAAGCAAAGTGAAACCCGAGGA
GGGCCTGGCTGTTGGGATTCCGGGTCAAGTTGACTAGTTAGATCCATGGACATCGTGTCT
TGAGAAATGGGGGTGCCTCGATTCAGCCTGAGAAGATGGTGTAGCATCTCCACACACAAG
GAATGGGACGCATGTGCTTGTCTAAGTACCTTGCCTGGTTTAAGAAGTTTATTTTCTTTT
TGCTAACTAGGGTAGGCTATCACACTACTCAGATGACCAGGCCAGACACACATTTTCTCT
ACCATGGCACCAAACAAATACGTATCAAGTAAATTATAGGCGGTCACACACCATATAGAT
CAGGTGTGCAATGAGATAGAAGCCAACCTAATAGACCCATGATGATCTCCTCTAGGGAAA
TGAAAGTCTAGTGACCTCAAAACAGACCCATAATGGTCTCCTCTAGGCCAATAATGGTGA
AGTGATATGTTGTCGAGATTCGCACATCGCTACTGAAGAATTAGACCACAACATATCACC
AAAATATCAATCTTTATTCCATTTCATACAAATAGAAATAGTAGACTTTCTCAAATTTCC
TCAAGAAATGCAGGGAATTGCTCACAAGACATAATAATGAACATGATCAGTAGAACATGA
TATGGTAAATAATCTGGATTGACAAATCTTTCATCAGCAACAACATCAACTACTAGACAT
CAATTAACACTAGAAAGTGATCACAATAACTAATATATAAGAATTGTTCACATCTGAGAT
GTCGATGGAGATGGAGGTAGGTGATGGAGATGGAGATGGTGATAATGTAATGGATGATCA
TGTTCCCCATGATGACATGATCTTGACTATGACAGTGCCTTCATGTTCCCCATGATGACT
ATGACGGTGCCTCGTAGATTGGTTAGGTGT