Contig Data
morexGenes
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Map Locations of contig_1568485 (4909 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1568485

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14605 1 3475 bp MLOC_14605.1 Available Available LOC_Os02g47900.1, FRAME:-1, EVALUE:0.0, 13102.m05407 protein SET domain protein SDG117, putative, expressed





CDS Structure of MLOC_14605






Contig Sequence (4909 bp)

>contig_1568485 4909 assembly3_WGSMorex_rbca.fasta
TACTCCCTCCGGTCCTAAATATAAGGTGTATTATTTTTTCAAAAAGTCAAACTTTGACCA
AGTTTATTGACAAAAATATCAATATATAGAATACGAAATCATTATCACTAGATTCACCCT
GAAATATATTTTCATATTATATATGTTAGGTATTGTAAGTATTTATATTTTTTGCTACAA
CATTGGTCAAACATAGACAATGGTTGACTTTTTAAAAAATTAATACACCTTATATTTAGG
AACGGAGGGAGTAGGAAATTGCATGATATTGCTCTGCAATTGAGGTCAGATTTTTGCAGG
ATGAGAATCCATAGGATGAAAATACCAATTGAATGTAAGATTGGAGAATAAGAGTAGTCG
TTAATAATCATCAAGGACCAGACAGTGGATATCAAACTAAACATGAAATTTTCAATGATG
TTCATGTTCTCCTTCTGTACATCTGATAACTACAGTAAGGCATGAGAAAGAATTAACAGA
CCTTTCTGCGTTTCTGATGGTCTCGTCATCCTTTACAACCTCCCCAACATACTCGCACAC
AAAAGTCCCCTGTGGAATAGGTTCTGCAGCTCGAACAGCCCAGCCCTGAAGCAATCGAAA
CCATTACAGTATGACTTGTGAAGCATGTTTAATAATAATAACAGCTAAGGACTGCGAGCA
GGGTTCAGGGAAACCAAAACCAGGTTGAAGTATTTCACCTTATTGTCAGTTCTGAAGAGT
TCCAATTTAACCAGCAGCCCTTGCTGCAAAACTTTATTTTTACAGGATGCATCGCAGGTA
CATAGCGAATTGCACTCGTATATGGGATATCCTTCCTGCCAATTCAACAAAACATGTGCA
TGCATCAAACCATATACAGAGATGAAAATAATACTAGAGGATGGAAATGTGACATTTTTT
AAATAGAAGAACTCAGTGGGACAAGATTTACACGCAGACACACAGAGCAACTCTACATCG
TTCAGGCCTCAAGCCATGGGTCAGGCACAGCAAATTTGACATTTGCCGAAAGTTTCGAAC
GAATCAAATAAGTTAAATCGCTAAAAAGCACATGGGATGATAATGATATGATCTCATGAT
TCAAAAATAGTCGACATGGATGCACAGAAACAGTAAATGGTGGTCCAAGGACCTGTGCAG
AATTGTTTGAGCAGCTCACAATAGTATGGAGGACAAAAGCAGGCCTTTCAGTCTTGACAC
AATTACAACCTTATGTGACACAGATGAGATTGCTTTGACAATATAAAGTAGGTTAGCTAT
GTAGAATGATCATTGTGGATGGGACACTGTACAAGAGTGCATGAAAAATATACACATGGA
CATGATATCAGACACAACCACAAACCTTTCTAGACTCATAAAGATAACAAATTACATTGC
CTTTCTAGACTCATAAATAAAGATAACAAATTACATTGCCTGCTGGTCACATACCGTGAC
ATCAACCAGCCTATCAATGGCATAGTGGCATGCTAAGTGCAGAATAATCACGATATTACA
GACAGTTGTTTACTTGTTTAGTGTGCTTTTTTTCAACTCTTTCACAACATCTATAATAAA
ATATGTGTCAGTGTCAACAATTATTACCTGCAAAATGATTTTGCCATTTTCATCATAAGC
AAATCTGCCATGCATCGGCATAGCATACATATCCACTAGGTTCTCATAAACACTGTCAAA
GAGGTTCACATGATCACATTTCTCAGGAGAGCAATGAGCATAAGAACATGCACAGCCAAC
CATGTAACTCTGCAGATACATAATTTATTAGAAACTGATTTGATAAATAAACCAAATATA
CATAGATGGGAATGAAAAAAGGAAGAAGACCAAGCCCTCTTTGTGGAATTGATATGCTTC
CATTTATAGATGATAATTTGTTCCAAAAGAGTACCTCTGAATCAACAAGAGATGAATCCA
TCAAACGAGTTGTGACGTAGTGAAAACCTTGCCATGGCACCGAACTGCAATCCTGCAATA
ATTCTTCAGGTTTCATATGGAGAGATTCTTTTGCATCAACATCAATTGCACACACAATTG
GAACTTTCTCCCTGCCAAAGCTTACATCTTCACAAAGAACAATCCTCTCATTTTTAAGCT
TCCACATGAAGTGCTCTGAATCAAGAACATAATGGTATTCTTCCATGCCCCATGTTCCGT
CATTTTCTGGAGGATTCATCACAGAAGCTACTACGGGGAAACCAACGTGAGTAAGCTGTA
AAGGTGGAAGGGTATTTGAACTATATCCAGATTTGCATCCCATAGGGCAAGTGAATTCCT
CTTGATGCCAATTGATTGGTATGCCAATGTCACTACAAAGCTTTGCAGCTTTCACAAATA
TGTTTTCAGGCATGGTTCCATATTTCACTTCCAATGCAGCAAGAAGACTTGTCTTACAGC
ATACAGAACGGGCCACGGATAAAATATCAAGGTTACTTGGATGGGGTCTTGTCTTTTGAA
TCTTTGAAAATAAAGTTTGCGCCACATCTGAGCATTGGAAATCCACTAATTTACCAAGGT
TGGCTGTTTCAGGTTCCACAATTTGCGATGTTATCATAGATAGATCAGAGCTTGAAATGT
CGAAATGTTTCTCAATCCCTGAGCTACTCCTCTTCTTTAATGAACTCGATGGTCGTAGGT
TTTTCTTGAATGCAGAATAATAGTGTCGACCACGGTTAAGTTGATACTTCCCACGTCCTG
GTGGAATGTGTCCAACCGTACCTTGGTCCATATGAGCAACTTGATGGTGGCGGCCAAGAT
CTGCCAGTAGATCAAATCTCAACCCACATAGTCTACAGGTCAACTTCTGTGAGCCATCAT
CCTTCCCAAGGTCATGGTTATCATATAGGGCCTTGAAACTTGTCCCTTCTGTTCTTACAG
ATTGACCTTTAGGTCGTTGTGGGGCATCAAGAAGCCCGAACTCATGGGCATGATCAGAAA
CAATATGTTGCCATAGCAGATCCATGTTCAAGAAATTGCTGTCGCATGACATACAACGGA
AGAGAATCGAATATTGGAGATACTGAGCGCCATGTTTTTCCTGTACATGTTTTTCAAGAA
CTTTTCTGTTGGTAAATGGGTCCATGCAAACAGCACAGGAATACCCTCTGAACAGCCATC
GGGTCTCCTTTCGGTGAACTTCTGTCCAATGTAATGCTAGACACTGATCATCAGAGAACT
CCTGGGCACATATTTTGCACTTCAAACCAGCTGAATGGCCAGTTCTCTCTTCTTGCAACA
TCATCATAGATCCCTCTTGGTTATCAGGATTTATTTGCTGAGATTCATTTGTACCAAAGC
CCCAAAGATTTGTTAGTTTTTCTCTTTCACTAGAGATCAACTTTAACAGAAATTCTCCAA
CATCAGTATCCTTCGACACTTCCGCTAGTAACTGAGGCATATAGTCATTACCAAGACCAG
ATTGTTGACGAGAAAAGTTGTTTCTCAAGAACCAATAAAGAAACTCACATGCCCGGTGTA
AACATATTTTTTCTTGCCTTGATGCACAGCCCTTCAATAAATTAGTAAAAACATCTTTAG
ATATGAGTCGACTCTTTCCGTTCCTGGCACGCTTAAGGAACTTTGGAAGATGCTTCTCAC
AGTAAAGAGTGTGTCGCTTAGCATAATCCTGGCATTCAACAATATTGTCATGAGAAAGAA
TTCCAATGCAAAGATCTGTATCTGAATTAGCTTTTGCCATGGACGTTGACATGGGGTAGA
ACATATCAGTGTTCTCCAATCCAGAAGCTTTATCACCTGAAATCTCCACAGCCATGGCCG
AGGTCAATTGAATCTGAAGAGGAACTTGGGAACTACTGACCCTTTCTGCATCTACGATGC
ATATTGCACTTGAGTTGGAATTTTTTTCCATCCCTTTTGGAGACTCTTCCCTCTTCTGGA
GACCCCCAGAGGAACTGAATAAATTATCAGAGCTTACAGTATCCAGGCTTGTCTGGGAAC
GATGTTTTTTGCAGAAAACAGAACCATGCTGGGCTCGATGCTTGCATTGTCTACCCAAAT
TAGTCATACCACTGCACACCATAGCATCACCAAGTCCCTTGTCATCCCTGCGGTCAACAA
AATGCATGCTTTGATGCACACAGCAATAAATATCACCATCATTAGCCCACCTGCCGCACT
GTCTTCCTTTTGTTTCTATGTATGCAGAACACTGCCGAGAATTCTTTGAATCAAACTCAT
GTCTGGCATTCTGTAAAGCTGGGTTGATGCGGCCTGATTCTGCAATCTCATGGGGGGCAG
AATTACTCAGGAAGGTGACAGTGTTATTCTGATCCATTGATGCTAACACTTCGATATTAC
CATCGGTGATAGATCTACTAGGGAAGTTATTACCGTTCAGGCCCTCGCTGAGAATGCTGC
AGTTAGCATCATTCACATGAGAAAAATGTGGTTCTCCTCTGCGTACTTCAAGTTTGGGAC
GCTTTCTGCGAGCTTGTTGATCCATACCTGGATCATCATAGCTATTGCTTTGATCAAAGT
TGCCCGTATTACCTACAGCATGTGATGAAAAGAACTGTTTCATGACTTCTTGTTTCCATG
TTTTCCACTCTGGTACTAATTCAGGCTGCATTGGTGCATTCCACAACTCATCAACCTTGT
CCCAAAGAACAGATTGCCTAAGTTCCTGCGTTAGAAGGAAAGAATTAACGAGGTTGGCCA
AGTTTTAACAAGCCTGAGAAACAGTAGTATATGCCAAATCTAATAAAGGAAATAATCGAT
ATACGCCAAGAGAAGTAGCGCACAAAATCTTCAATTTCTGTTTTGCAATTGTATTGGTAA
AGCAACAACAGAGACCTTTTTTTTCGAGAAAACGCAAAAGACTCTTTGCGTTTCGTTTCA
TTGAAGAGGTGGAAAGTACAATCCTCCTTAGAGCATCTCTAGTGGATGG