Contig Data
morexGenes
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Map Locations of contig_1568318 (4495 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1568318

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14544 1 459 bp None Available Available None
MLOC_14543 4 2390 bp AK370796 Available Available None





CDS Structure of MLOC_14544






CDS Structure of MLOC_14543






Contig Sequence (4495 bp)

>contig_1568318 4495 assembly3_WGSMorex_rbca.fasta
TGTGTTGTGATATCTTTTCGTGAGTCATTGAGTTTGATTGTACGCATTTGCGTATATGAT
TAGTGTATGATTAAATCGAGGACGTCACAGGACCACTCCCTCACGTTCTTTCACGGGATC
TTTAAGTAGAGTTGTGCCCCCCTATACATGGTGGACTTGGAGTCATGGATCTTTAAATCA
CAAAGTTTATCATAATATATATTGTTTAGACTTGCCTCAATATATATATTTTTAGACGTA
TAAATCATATTTTGATGATCTGATTAATGATTGAAAAAATCCTGAAGTACATGTGAGCCT
AATAAATAAATCCAAAGGGAGGGAGCGCCACTTTGCACAGGAAAATCTGAAGGGGCAAAG
AGATTACTCAGTCATTTAATCGCGTGTCACCTCCGATTAAGTATGCAAGGTGAAACGACA
ATGGAATAATAATAATAATATAAAATAAACACAAGAAAAATCCTGATATTTCACAAAAGG
GATATGTGAGGAAATGAACGGACATTTGGCGGGCAAGAAAGCAGCTGCGGTACACAGAGC
TAAATGCATACGCCGCTGATGAATGACTCGTTTCATACATTACTGATTACGATTTTGCTA
TTGTGCGGGGAGTCGCCGGAATTGTTTAGCCGCCTGCCAAAGGGGCTGGAGGCAGGCCGC
CGCCTGTGCGAGGAAGAACGGCTGGAGGTAGAAGATGAACAGTACCACAAATTGTTTTCA
ACCGCTGGATGAAGATCTAAGGGCCATGGATCAAAGTGACTGATGCAGTTTTATTTTCAG
TTAACTGATGCATAAGCGGTCCCGACTGATTACTGAATATAGCTCAGATCGATGCCCACA
GGATGAAATTAATAGTCTCCCTCGTCTCTCCAGTTAAGCTAAGACAGACTCAACAATTAA
ATGTTCAACAGCCAACCGTTCCAAAACGGCAGCAGGAAACCAGTAACCGCGTGCATACAA
AATGTATCTAAGGCATTACGACATGGGGATGCAGAATACAGAAAATGGTGCGCTTTAGAC
TCCGAATGAACAAGGAGAATATCAGCCAGCTCCTCTCCACCCTCCGACCCCTCCGACCAG
CGTACATCATCGAAACGCGCAACCAGGGAGGTCTCTTTCAGTCATCAGACACCTTGGGGG
AGCTCTCAGGCGTCTTGGGCATCACATCCGAGGCCTTCTTCACCTTGTGCGCCTCCACCG
CGGCTTTGAAATCATCCCTGACGCCAGTGTCCTTGAACTTGAGGGCAAACGTGGTGAGCC
CGGCCGGTGACTCGCCAGTGCTGTTGACGCAGGCAAACGTCACACCCTTCTTCTCCATGT
CCTTCAGCGACATGTCGTCATACAGGCTCGCATTCAGGACCAGCCGGTAGTTGCCCTTGG
CTCTCATGACGAGCCGGGACCTCTCGCCGCCGGACACTGGGACGTTCAGCTTTAGCTCCC
CTTTTCCTCTTTCCTTCCAGCCCCCATCGAGGTACTCATACATTGCGGAGTCAGCGGTGA
ACACGGCCATCTCGTTCTCTTCACCTGTCTCCACTGGGCCCTCTGGCATGGTGAATTTCT
TTGGTGCTTCTGCTGCAGCGACAAGCGATGGAACAGAACTCCCGTTGTTGTTAGTACCAC
CGATATTGAAAGAAGGGAAGGATGAACCGTCACTCTTTAGCCCAAATAGGGGAGCGTTTG
TGCTTTCTTTAGAAGCTGAGCCAAAGGAAAATGATGAGGCTGAAAACCCAGTTCCAGCTA
GTCCCGTGAAGGCGTTATGGCCACTTGACACATTCATAAAAGAGAAGAGAGGTGTTGGTG
ATGATGACTGCCCTTTGTTATCAGCGACCTTCTGTTCACATGATACATCCTTGGTCCCTG
ATTCAGATTCATCTTTCTTCTCTGCACCATCCTTGCTGCTTTTATCTTCATCTCCACCTT
CATTCACTTTATCACCTTCATTCACTTTATCACCTTCATCTTCTGTTTTGCCCTCGGTTC
CAGATGGCTTGCTGTTATCTACCTTGGGTTCTCCAACCAGCACTTTGTCCTCACCAGTTC
CACCCACTGTGCTGTCTGCCTTGTTATCAATTTCAGTAAGTGAAGAGTGTGCTTCCATTG
GGGCATTTGACTTGTTTTCTGCATTTGACTCTTTCAGGCCCAATTCATCCTTTTGAATCT
CTGCTACCTCATTAGAATCTGCATTCTTGTCAGCATCTTTCCCACTTCCATTGCTGGCCT
CATTAGCTTTCTCACTTGAGTCCCTTACATTTGACGTTGTGACATCAGAAGGTGGAGGTC
TTGAGACAGAAATACTTGTTTGAACACTAGAATCATTTGTGGTAAACTTAATTGCAGAGA
AAGGATTAGAAGAAGGAGCTGACGATGGCTGTTGGCGCCGAACCTTTACAATTTTTCGGG
TTGCCATCACTTCCTCACTAGCTTTCTTAAATGTTCCTCCCTCTTGCTCCGGTGAGTCAT
CATCAAGCTCAGGATTGTCCTTGTTGATTTGTTTATCTGCAACCCTCTTCCGAGAGCTTT
GAGCATGTTCCTCATCCGCCATCTTAGGAGCTTTGAGTACCTGGATATGTAAACATCAGA
ACAAACTAAGCAAACAGTAATAAACAACTTCATACAAGTAATCTTCCAATCATCATAGGG
AATAGCACAGTTTAGACACAAATTTGACTATGCGGGCTCCATTTTTTCTAGTACAACAAG
CCATTTTCACAGAATTAACTTCAAATAAACCAGGAAAACTGAAAGGCATACACAAACATA
ACGGCAAAGTAGGGAAAATGTAACCAACAGAAGACAACAGGCATACACAAAATGATAAAC
CATAATGTAGGCAAACAAGGTTAGTAGGTTACCCAAAGTGCAAAGATGAATGTGTAATCT
CATATCATATATTATGGTGCTTGCACTTGTGACTAAGAAACAAGCATAACAGCAGTTTCC
CAACTTCACGTAGCAACTGTAAGAGCATCTCAGATGGGATACCAATCCCACCAGCATTGC
TGCTTTCTGTCTACAGCCTTCCTCATCAGCGGAGTATCTATATTATTTCTGGGTAAATTT
TTGATTGTTGCTTGAGCAACAAAGATAAGATACAGGTCAAACTAAAACTTTAATTTCTTG
TGTGCGGTTTGGTTTTGGCTCGACTGTTTCAAAGATGAGAGGGTTTACAGCCAAATATGT
TGTGTTACTCCCTCCGTTCCTAAATANNAGTCTTTTTAAAGATTTCACTAGAGACTACAT
ACGGAGCAAAATAAGTGAATCTACACTTTAAAGTATGTCTATATACATCCGTATGTAGTC
TCTAGTGGAACCTCTAAAAAGACTTCTGTTTATGAACGGAGGGAGTAGTTAACATGTAAA
GATTGCTCTTATATATTGTTAAAATACACAATATGCCTAGGTGTGTGAATTACATAGAAT
TATTTCAATGCTTTGATATAAATGCAAATTAGTGATATCATTTCTCTTTTACTTGTCAGA
GTAGTTTATTACTCTCTCCGTCCAAAAATAAGTGTCTCAACTTTATACTAGAGCTTGAGA
CACTTATTTTGGGACGGAGGGAGTAATATGTTACCCAAGCTAAGCAACCCTGGCATGTAT
AGTTCCTTCCGTCCAATTACCTGACATCTAGGAAAAGAACCAGCATGGTGTGGGGCATTC
AACAGCGGATATTCTGTGTCCTAGGTAAGATGTAGCAACAGCGAGCTCATCATTGCTGGA
TGATGATGACTATAGATCCAAGATAAATTGCACTACGATGACGCATTGCGATGTGGTGGA
GGAAGAACCAAGAGGCGAATGGCTTTGCATATATAGACCAGACAAAAATATGGGCATTAG
ACTACCGCTAACAAATACAACCATAACAAATACTCCCTCTGTAAACTAATATAAGACCGT
TTAGATCACTATTTTACATTTTTATTAAAGGATATCAATTAAATATGGGAGGGTGGAATA
TAGGTAGTGGAAAATTGAGTTGGGAGTCAGCTGGAGCACAAAGAGATATGGAGAGAGAAT
TGTTTAGAGACGCCCTAGCAAAAGAAACTACACAATATTTATGAATGGAAGAATATGTTG
CCTCTATAATAATATATCAAATGGTAAGTTTTATGTTCACGGAAAACAAATATTTTCCTG
CATCATGATGTTGGCATGGTACTAACATACCATGGGAAAGGTAACGCCTCCTAGAACTAG
AAGCATGCATGTTATATGTGCAACATTCTGCTTAAACATGTCGGTGGTATTTAAACATCT
AAAGCAAGTGAATTTGTATATATGAGCGATGAGAAATATTTTACTAAAAGGTACAAATCA
ATATCCAGCATACACAAATATATATACTAATGCACGGAAACTCCTGGTCCTAATAGCTTC
CAAGCTAAAGTACTCGGAGGAGAACTTTACAACAACAACAACAACAACAAAGCCTTTAGC
CCCAAAGAAGTTGGGGTAGGCTAGAGGTGAAACCCATAAGATCTCGCGACCAACT