| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_1568114
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_14458 |
1 |
867 bp |
None |
Available |
Available |
LOC_Os12g43840.2, FRAME:-2, EVALUE:1e-73, 13112.m04623 protein ankyrin repeat domain-containing protein, putative, expressed |
CDS Structure of MLOC_14458
Contig Sequence (6247 bp)
>contig_1568114 6247 assembly3_WGSMorex_rbca.fasta
GGGCGGGGGCGGACCGTGGGGGCGGGGGGGGAGGGGGCGGGGGGGGCGGCGGGGAGGGAG
GAGCGGGAGTGGGAGGGAAAGAGGGCAGGGTCGCGGATAGCCCGGCCCGGCCCGGCCCAG
CCCATATACTTATTATTATCAGAGATGTTATTGTGCTGACGTTCATGGGAACGTTTTTGC
GATGAGCGCACTTATGGCCGTTGGATTCGGTCGCACGGATCCTAGCGCACGGTTCTCTGC
AACCTCCGGTTGAGATAACCACGCCGTGGCTCTCTGCGTCCACGGCTGCACCAGTGATTA
ATAAGACCAAATCACAGGTACATAGGGAGAATTTGATTACCTGGCTCTTTTTCGTACATT
TGCATCCGACTTTACTTACAGCAGAACCGGAGTGAACCCTTGAACCCAACCAACGAGTTC
CCTCCCTCACATGCATAGGCTGGCCGAGTGTTGGAATTAACTAGACGGAAAATGTGTACT
GATGTGGGGCCGATTGTTTCACTTTTCATAAAAGGGTCAAGGCAACGGCCTTCTAAATGC
GTATACGCATGCCGTGTCCATCAGACGTGTAAACCACGACAGAGATAGTACTAGATAGGA
AAATGAATGTGCAATAAGCTACCAATATCAACGAGTCAATAACTATAACAAAATATCATT
GTGGCAATATCTCTAACCTTAACATAAGGATGACTTCGTGTGGATGCAGATTTTTTTTTC
CTTTGCCTTCAAAGCTTTTCTCACATTCCAAATAAGATAAGCTAACACCCTTGTTATGCA
TCTACACTACAAGAACACAAGACAGTATCATACATCTACTCCCATTGTTTCTAAATATTA
GCTTTTTTAGACATTTAATGTAAACTATATATAAAATAAAATGAGTGAATCTGCACTTTA
AAATACGTCTCTTCCCAATCCAGTGATGAGCGCTGAAGGAGAGCTCACGTGGTGACGAGA
ATGCGACTGGCGAAGGGTTTAACATCTAGAGGAGCTGCCATGCGGGTGGTTGTTGTGGTA
GTCGTCGAATACATGTACTCGATCATAAATAAATATTTAATAAATATAAACTGGGGAAGT
GAGGAGGGTGTGGGGGGCAACGCCCCCCTATCCAACCCCATAATAGAGTCGATCATTATG
TTCTACATATTACGTTATTTTGTATTTATTTAGGTATGTAGATGAGACATTATTTTAGAT
GAGCCTTAGGTTGGGTGTTTGATGGGGTAGTTAATGCAAACGACTGCCTGGTTGGAGATT
ATCCGCATCTATATATGCAGGCGTCATCTTCAAATGGCCTTCAACAAGACCCAGTTGTTA
GTGGTAGTGTCAGGTGTGATGAATGACTAATTTGTAGTAGGAAGTACCCTAGTGGGTTTT
TTGTCTGGATGTATCATCTTCATCTTGGATCTTAACATGTGTTGAACGATCTGATGTTGA
ACGTATCATTTTTTTTTTTATGTTTTCAATCTTATGTTCTTGAATATCCTTTGAAGCCAG
CGCATTTGTACTTGTTGAGGGCTCAGCCGTTTAATAATGTCTTGGTTTGAACTTTGAACT
GCAGATGATCCTCTTTCAGCTTGAATTTGGCAGTGCACATTTTATTAATATTGAGCTGTT
TGCATAAGGAAATATCATTCTCACATATTCGGAATACACAATGATAACACTACGATCTCA
CAGGTTCTTTTCTAATTCATGCAGTACTATTTTCGTTCTCATAGGTTTGATCCGAGAATT
GATTATTCTTTTAAACTCTTACGTCCACTGTTTGTTTATTATACTCCCTCTGTAAATTAA
TATAAGATGTTCTAACTGTACTTGTACTTATTTTCTAATGTAAAACTTCCGGAAATGGCA
AAGAAGGGTTAATTTATTATCATGTCATGGCATAACTATCCACTAGAAGCCTGCCGTATT
TTTCAAGTCTGCTACGTACATTTTTTTGGCTATGAATTACTTCCTCCATTCCTAAATATA
AGTTTTTTAGAAATTTTATTAAAAGACTACATACGAAAGAAAATGAGTGAATCTATACTC
TAAAGTATGTCTATATACTCGTGGAATCTCTAAAAGGATTTATATTTTGGAACAGAGGGA
GTACATAAAATCTTTTTCTATTTTCCCTATCATTTTGTATAGTCTTTTTATATGAATTTT
ACCATGGGTCATTCAATTTTTTGCTGCGTGCGTGTTTTTGTGTTTGCCATGGGCCATGGT
AAATTTATTTTTTGTTGTACTTTCATATGACTTATTCGTAGCACCAGATGGCAACGCTTG
TAGATGTTTCTGTTTTACATCTTAATATCCCATTTTATTAATAAGACCATGAAAATTTTA
GTGTTGTTGGCAATGGACTTTACTCTTGCGATCATGACAATTTATGTAAGTGATTTTTTT
TGGTAATGACAGAAAATATAGAGCATGTCCATTTTACTAATAAGAGCACGACAACTTTAA
TTTCACTCCCATGACAATTTCATTAATTTATATCATGGCAATTTTTTCCGTATGCTATTT
TTTTGTTATGACAAAGGAAATATGGATCAAGGTCATTTACTAATAAGAGCATGACAATTT
TATTTTTATGGCATGAACATTTCATTAGTTTAAATCATGGCAATTTATTTTTTTGTTACC
CCTTTTTGTAAATTTAATTTTCGTGTGTATTTTGGTACAGTAGCATGGCAAATTCCCTGT
TTGTATATTTCTTTTCTTTTTTTCTTCATGGCAAAAAGAAATTGTATATACCATAGTAAT
TTATTCTAAACGTCCTATAGCAATTCCTTTTTGTATGTAGTATCTTCAATTTTGTTACGT
AGCGGTGGCCTTTTCCCTATTGTCATGTCAATTATATTCTCTGTTACATATATATACATC
ATTTGCATTAATTAGCCATTATTTGTCTCATGGCTAATGTATGCAATTTTCTATATCACA
ATTTTTTCTATATTTGCTTGATGTTTTTTTTTTGCAAAAAACATTTAACTCGGCCTTTGC
GCGCACCATCCGCTGGAGCAAACAGGAAAGGAGCGACAACGGTTAGCTCGTTCCCCCCTT
GAGGGGTAAACGTCGTTTGCACGGGGATGACAATTTTATTTGGCAATATTGAAGTCCTAT
ATTATTGGGATTTGTTAACAAGCGGATGTTAGATTTTTGACATGGGAAAACAAACTTTTT
TGGTAAATTATGTTGTCACGGAGATGACAATTTTATTTGGCAAGCATGACAGATCCATCA
TGTCCAGTTTTCTTTTTGCCAGGATTGCCGTGCTCGCTAAGTGAAATTACCATCCTCGCG
ACAACCTAAATTGTCATAAAAAAACGTTCGATCTGCCATGCTCACCCAGCTAACGTCAGA
TTTCGAACATTTTCTCTTTTTGTGGAAAACATTATTCTGCTCCCATGCTTGTTAAAGAAA
CTTGTCATCCTAAAACAATATAAATTGTCATAAAAAAACACTCAATTTCCCATGCTCTTC
CCGCAAACATTCTGGTTATCAAAATCCTATTATTGTCCCCCTTTTTCTGGACGTACTAAC
TCACAAATTCCACCTCAAAAAACACAAATACACGAGTTACAAACCCCTTTAGAAAATGAA
TTTTGTGGTAAACTTTTTGCGACAGACATCTCGTATACTATTGATCATATTGATGGTCAA
AGTACATCTCGAAATACATATAATGCCCTATATATTCAGATGAAGTGAGTGCTTTACATG
CTAGGGTGAGTGGATATAGGATATAAGGTTATGGTTAGGGCTCCTAGTCTCCTCGAAGAT
TGTGGATGCAGAGGGAACACATTATTTCGCGGGACAACGGTTCGAAGCACAACATCGTCG
CCAAAAATGGGGAAGAAAAGTATCAATCTCCCTCATGACTAGTATGAAGGAGAGGCATGG
GGGCGAGCAAATTGTTTTGGATCATACACACTTGACTGTTTTTTCCAAAGAGAATTTCTG
GGAAGCAGTAAGGAATCACAAAACACACCTCAACAGAAAATCCACCAAATTTCAATCCAT
TACCATCCACTGTCCTCTCACAAACCGGATGATGCAGTGAGAGTGAAAAATGCTGTTGCA
TGGGCGCAGCACAAGCTTACCAAAAGCTGCCAGTGATACATAATAATCTACTTAAAACTA
CTCTGCTCTGAATTCTAGAGTCTTAAGACCATCACCAAGATGACACATTGAGCCATTGTT
TCAAGCTTAAATAGCATCAAAATGCCGGCACTACTGCTGCTGCTACTGGCTGGTTGTAGA
GCGTCTCTCTAACCATCCCGTCTACGAAGACGCCAAAAAATAAGAGCATCGGTTTCGGCG
GGCGTCACTTCTTCTTCAGTTCCATCGCCTCCCTGGAGAGAACAAGTCCATCAGATCATC
AAATATAACCAACCACTCACCTAGCACAATCAGTCAATTTGCTTCTGATCTACTCTACAT
GTAAGCACAAACCACATATATATGGAGTACATTTTTGTCGCCCTGGACGACAAGAGTGAG
TAAATGGTGGGGGTCTCTTTCCTTACATACCAGAACAATTTGTCCATCTCATCGTTCTCG
GGGTCCAGCTCCACGCCGCCCGACAGCTCCTCGCAAGCTTTCTCATAGTCCTGGAAGAAA
TGGACACAGAGTTCAGATCGACGACTGCCCAGATGAAAGCAGTAGTACTTGCTAGGATAC
AAAAATGCCACTCAAACAAAAAAAAAAAGAATGCAAAAAATGAAGTGGTCTCCAAAAGGA
AGAAACAAAGTGTACCTTCAGCAGCATCAGAGCCTGTCCTCGGCGAAGGCGCGCCTCCGC
CCACTCCGGGCACCTCCTCTTGCATCTGGTTGCATCCTCCAAAGCCTTTTGTCCATCGCC
AAGCTGAAGCCAGCAGCGGCTCCTGCTCGCGAGAATCTTGCCATCAGATGGATCAACTTT
CAGTGCCTGCCCACAACCAAGCAGCATGCATGTGTCAACATATATACCGAGTGACGTTAT
AATACCAAATTCTACCAAGAGAAAAAATAAAATTGCAAATGGATAGCAAATAAAGGGCAG
ATACATCAGCGCAGATTAATACGGACCCGGCCACGACATCCTACTGAATCATCAAAAATA
ACTCATGAAGATAACATCTACTCAACAGAGGCATGCGATCTCTGTGCATGCACTTATCCA
AGGCCTATGCAAGAATTAATACTTCATGTCATTTTTGGTCATTGCAACTTCTACAGCAAT
TCTCCTGTAAAACAGGTTACTTGCTGGTTTTGTGGTTTACACTTCAGACAGTAAGCTACA
TCCAAGGAGATGATGATGCTGACACTAGCCATTTAACAGATTAACTTTATAAAAGGTGTC
TGCATGTAGAACATTTCACACTCCAAACTTTTACAGATTAAATTTTGAAAAATGTAGACC
GACAGAACACTGTACCTGTGTGTAGAACTCTGATGCATTTGTGTAATCCTGCTTTTCAAA
TGCTTCATCCCCTTTCCGTTTCAGGTCGGACTTCCTTGTGTTAAGAACATCCTCATCCTG
AGCACAAATAACTTCAGTCAAACATTCGAAATTCCGATGTGTGCGATAATTATATAGCAC
CTGACTGAGGATTTAATGCATTCAAAGGACAATCATATACATCCAAATGTTATTTCCATT
GGGGAATGTCACTTATTTTCGTCACGGTGGCATACCTGCAGCTGCATCATCTCCAGTTTG
GCATGAGCAATTATCCCATCAATGCTCCAGTCTTCCACAGTTGAGATTGGGGAGGTGACA
GGAAACAGAAGCTCAACGTCATCCCGTGTGCCATACACAGCAGCTAACTCTATCGGCATT
CTACCACACTGTCAAGCAAAAGAAGAAAAGCTTGCTGAGCAATACTGAAAAGTGAAGATT
GAGAAACATAAAAGACAAGATAATTAATCCTTGGTGGTCTAAGAATCAAACCATGACAAG
AATATAGATGCCAAATGGAAAAGGAAACGTTTACAAGCTTGTGTTAGAAGGCAACTGATA
GTAGTCAAACTAATCATAATACCACAGATTACTGCCAAATATACATCTCTTTAATTCAAA
ATCAGCCCATTCAGTCGATAGTATCCTATAACTTTGTGTACATATCTGACCACGAAAAGA
AAATAGATGGAAAATGAAAAAGGAAACAGTAACAGGCTTCTGTTAAATGGCAACTGATAA
TAGTCAAACTAATCATACTACAGAGTACTGACAAGGTGCCCGGCCCGTACCCCCTCGCGT
CGCCTCC
