Map Locations of contig_1568068 (5682 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1568068

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14434 1 2334 bp AK248453.1 Available Available None





CDS Structure of MLOC_14434






Contig Sequence (5682 bp)

>contig_1568068 5682 assembly3_WGSMorex_rbca.fasta
GTGATTGTTGTAGCTAAATTTTTGTATTTCATATAAACTTTGCCCCCTCCATGAACAAAG
TTGCCCCCCGTATGTTTGCATGTTGGCTTCGTCCGGGTGCACTGGCAGCTTGTTTGGCGC
ACTTGGGCGCCTCTCAGTCTCAGGATGGGGCTATTCATCTGGCTGGCTGCCCAAGACCGG
CACTGGACGGCCGCACGGCGATGCGTGTGCGGTGTGCCCTCTGTGACCAGGCTGACGAAA
ACCAAGCAACATCTTCTGGGCCATTGTCCGCTCTTGAAGCAAGTAATACGAGGCTCATCT
GCTCGCTGATCATCCAATCGATCAAATACGAGGCTACCGGGATGACAATGTTGTTCTTTG
GGCTGAGCATCCCCTTATGTAGTATTCTCCTCACTCTGACCCTAGTTGTGCCTAATCATT
AACCCTCTGTTCCTAAATAATTATAGTTGAAAAAAAACTAGTTTAATTCTGTCCAACTAC
AATTATTTAGGTACGGAGGGATTAACTATCAGTGAAATCGCAATGGTGTATTCGTCAAGA
AAAGAGAATGATCTTCGTCCTCTTCTGCTTTCTACCTCTATTCTTCCCCAAATCCCCGAC
CCCTACCGCTAGGCTACATCTCTCTTCTCCTCCGGTCAGGGACATAACAGCATAGCCAAG
GGAGGAGACGCCGCTGCGAAGCGCGCTAGTGTGACTCTGTGCGCCCACAAATACAAGCGC
ATGTTGTGTTCCCATGCAACATACAGTAGCAAACAAGGCTGCAGCCGAAAGAGAGACACC
ACAAGGTAGTAGCAGGACCAAATAACACTCTCACCTGGTAGTGAAGTTCCAGCATCACAT
GAAAAAATTGGATTATTCACTCTGCAACCAGAGCAGCTGACCATTACGGTCGTTATCACG
GGCAAGAATCATGCATGTCCCTGCACTTGCGGATAAATACAGATGGTGGGAAATGAATAA
AGTCCACGATACCATACCAACTATCCCACGTTTAAGTTACACAGGGCAACGGCAGATTTC
TCTACAACGCAACTTCATAGGCTTCTCTCCACAAAATCCCAGATCCTCTCCTCCATATAG
ATCCGGTCGTCTAGCTGACGTGGCATGTGCCTCTCATCAGGGAAGAGGAGGATCTCGTAC
GACTTGCGTTCCGCCATCAAACTGTTGATGAGCCTAGCCGTGTGCCTGAAATGCACGTTC
TCGTCAATCATCCCATGGATGAGGAGCAGCTTCCCCTTGAGATTCTTCACATGGTGCATG
ATTGACCCGTACTCGTAAGCATCGCTATGCTCCGAGGGCAGTCCCAGGTACTTCTCTGTG
TAGAAGGTATCATACCCGTCCCATGCAGTCACTGGGGCACCAGACACGGCGCAGCAGAAC
GTGTCGGGAAACCTCGATAGGCACATTGCTGATAGAAAACCACCGTAACTCCAGCCATAC
AAACCAATATGTCCAGGCTTCGCAAGGCCTTGCTTTATTAACCACTCAGTACCAGCTAGT
TGATCCTCAGCATCGACACGGCCAATGTTGTACTTAAGCTGTCCCTCAAAATGCAAACCT
CGTCTTGCAGATCCCCGGTTGTCCATCTGCCAGAGCATGTATTGTCGTGAAACCAGTGAT
AGGTATAGGTTGAGCCTGGGATGCAAGCTATATGCATCTAATCCAATTATGTAAAATGGC
ATTATGTGATTATTATTCCATGGTTTGCAATTGTTAAGGGCAAGACGGATGCAGCAGGTG
CATAATAACAGGATTCCGGATGTAAGCCATCACCCCGTTTGAAGATCGACCATTGGCATC
AATAATTTTAATTTTATATACAAATGTGCTGGAAAAGGTTGGCATTCTAAAAAAACAAAT
ATAGCAGATTCTCCAAAAAAATCCTTCACTTTGTTCTCTAAAAAAAAATCCTTCACTTCT
TTTATGGGTTGTCATAGGTTAATGTTGGGTTTCATCTCTAGCGTACCAAAATTGTTTGGG
ACAAAAGGCCCTGTTATTGCTGTTGTAAAGAAATGCTACCTAACAAAACCATGTTGAACA
AAATAATAATAGAAATAATAATGTTTACCTTCCAGACCAATATTCCCTTACTTCGCAGAT
ACTGAGCCCTCATGTCAACAGTGCTAATCCATGAATCACTAACGAGCTGGACACTGGGAC
CACCATAAACATTAACAAGTGTTTTGTAGGGAGGCGGTCCATATTTCTTCTCATCGGGAA
GATAGAGAGTTCCATAAAATGAAGTCCCATCCTTTCCTGTAAACTGGACCATCTCTGGAG
CCAGCTGCTGAAACTTTTTAAGTGGCTGAACTGTTAGTGGCTGCTCATACAGAGGCATTA
GTACACTTCCATCAAGCAAAGAACACAGCAGGATCACAGGTGGTGATTTTACTGAGTCAT
ACACATCAATAAACCTTAGCAACTGATGGTCAAGAATTACTGAATGTCGTCCAGTTCCAC
GAGTCAACCTCTTTGGGGCCTGTAATGGAAGGCTACAATCAGGAAAGAGATTGGTGCAGT
ACAGATTTGTCTCCAATGGTCCATCCAGTGTTCCAGTAAAATATACAAGTCCAGAACTCT
CATTGACACCAGCAATTTGGTCGACCAACCAATCACCTTGCGTGATAGGGCCTAAGCACT
CACCATTCTTGTCATGAAGATATAAGTGTCTAAATCCTGTCTTCTCACTGGCCCAAATAA
ACCCACCTGGATGTTTACTACTCACTCCACTGTCTAGAGGAGTGAAACAATCATGTAATG
TTATCCATATAGCATGCTCTTCTTCGAGTAAGACTTCCCTTTTACCAGTGCCAATATCAA
ACTTGAGGAGCTTAAGTTTTGTGTGAGCTCTATTGAGAACTTGAACAGCAAGAGCATTAT
GATGCATCCAGTTAACCCTAGCAAGATATTCTTCATCGCCATGTGCTCCATTTGGTTCTC
CACAAAGGAGATCCATCCAAGTTACTTCTCCTCCACTGGAAGGAACAACTCCCAGTCGCA
CTTTAACATTAGCTGCTCCAGCAAAGGGGTAAGCATGATCTTCTTGAGCATCTAAACCAA
CAGAATTTTTGCCCTGATGCATAATTCTGTATAGTGGAATTGCAGATGAATCTACTTCAG
TAAATGCAAGGTGTTTACTATCAGGAGACCACCAAAATCCCATCTTCCTTTCCATCTCTT
CCTAAATTGAGGAATGCAAAGTATTAGATAACAGTCATCAAAACAAATTTCATACTAATG
ATAATGGAACACCCTCTAGTACCTGCGCAATATATTCAGCAAGTCCATGGACCTGAAAAG
AGAAAACACATACAAATGTTAGATTTGAAGTTTTTCCACACTTACCCAGTATATACAGTT
GTAAGAATACAGTCAGCAAAAGAACAAGCATGTATAGTTACATTCATCAATGATTGATAA
TGATGAATTATTGGTGGAAGGGGGTGAACACTCTTTAGCAGCTTAAGAACGTGAATTACG
TTTGCTAGTTACCAGTTAAGTCCAAACATAAGCCAGCTGTTTGGACCTGTATTTAGCCTA
TTTTTGTGGCAGGCCAAAAGTTAAACTGGATTAAGAATGCCTTACTAACAAGAGACTGAC
ACGGAACATCTGAACCACAATACTAGCATATACAATAATACAATACCAAATCAATACCAT
TAGATTCATCATTGAATCAATTTTCACATCATATAGATATGCTATTGTAAATGTTCATAT
TGTTTTCTATAAACTTGGTCAAACTTTACAAAGTTTGACTTCAGTCAAAACTCAAAACTA
ATATGCGGGGTAAATAAGAACGGAGGGAGTAATATTTTGCTGCCTGCTAAACAAAACTGG
GCATGGTAACACACGTCAACAGCAACCATGCTCCCATTAAAATACTATTTGCAACAGAAA
AGCAAGGAACTACCTTTCCACTTTCTCTTGCACCGTAGGTCAATTGCCTAGTTTCGCCAT
CATCAAAACCGAAGTTATATATCTTGCACTGCAGTTCATCATCCCTGACATATGCAATCA
TGGTCCCATCGGGAGATAGATGTGGGTCAATAATTGGTGATGTGGAAGAACTTTGTAGCA
TGAGTACTGGTTCAGAGCCAGACAGGTCCTGAAAGTAAACCTATTGAAAAAGGAAAAGCT
GGTTATACATCTCTCGTGAAATCAACCATATCTTCAAAGTTGCAGAAGTACTTTCAGAAG
AATCAACAACATGTCTGCGCTGGTACTCAGCAAGAACCAATTTTCACCGAGCGGAGAAAA
CATATGAACATTCATTATCATTTCATCCGTGAAGTCTTGGAGAATGAGAGCATCCCTGCT
TATTTTGTCAGCAACGATGAATAGCTCACAGACAACCTAGCAAAGGCATTAGGGCAAGCT
CGCTTCCATGAGCTTAGCGTAACGATTCGAATGGTCAAGGGAACATACAGGGATGTTTTT
AGATAGACCTTCAGGGCAACAATACAAGCTACAGTTTCAGAAAATAACACTCCTGTGTGC
AGCTCCTTCTAGTCTGATTCTAACACAAAATAGCAAATAGGTAGTATATACACTACTGAA
ATATTCTTATATGCTACATACAAAAGCTACATACCCTCTGGTATGAAAGATTACTACTCC
AATGTACAAAACACATGTTGAACATCTGGTGTTTTCATGTTAGTGTGATGAATCATCGGT
GTTATTATTAAGGGTTTTTTTCCATCCTAAATATTGATCTAAAAAGGACATGAATTCTGA
TAGATGCACCTGCAAGATTAACAACATCCAATCCATTTTTTGTACAGTTGGTTAAAAACA
TATCTGCCAAGCCTGGACTGGCATCAGAAGACATGGCATGAGACAACAGGATGATCTCCA
AAGGGGAGAAGCAGGGAGTGGCAAGAAGTGGATTAGCGCCAAGTAACATATCACTATCAG
GGAAGACTGCACGCTGGACTGGCTAATATTAGACTTGCAAGTGAGATACAGTGAGGGAAT
GGCTATACAGCCAAGGCACTGCTGTGATGTGACAGATTATCAATAGAGAAAATAAAAGTG
AATTCTCTCCAATTATCTGCTTCCTCTCCAAATTCTTCTTCCACACCTCACATCATTTTT
TCTTGTTCTGTGTTCTATTCCAATCCCATCATAGGCAGGTTTTTAACAATATTGAACAAG
GCAATACAACCTTTTCCCTCATATATGCAAACAAGATGTCAGCAAGAACTACTCTATGTA
AGATAACTTGGCACAATTTCTATAGTTTTCCTCTCCTGTCAAGTGGGTCAGTTGTGATTC
TCATCTCCTAACATGCATCATACATTTATCATATCATTTTTTTAGCATATGCATAGCAAG
GCAAATCAAACTATTGACCTCCGGACCGGAAGTAGTAATACAATGCAGAGAGTTAAGCTA
CTACCAAATTCAATTCAATTCAATGCATTGAACAAATAGCGGAAGGTTGAAGGGAAATTA
CGAACCCCTGAGGGGAGAGGCACGACAATGCCCGCACGAGAAGAGGGGCCGCCAGACCGA
CGGGCACGCCACTCGTACCGAGTGACCCCAAGGCCACGCTCCCGGGAACGCTCGCGGCGT
AGCCGCTCCTCGGCGGATAGATTGCCCTCCTCGAGCCCGCCGCCGTCAGGAGGGGCGAAG
AGCAGCCCCCGGGGGGGGCGGGGGCTGGGGGGGGCGTGGGGG