morexGenes - Barley RNA-seq Database

Contig contig_156800

Source Contig contig_156800

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_156800 (2615 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_156800

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_14409	2	2406 bp	AK354028	Available	Available	None

CDS Structure of MLOC_14409

Contig Sequence (2615 bp)

>contig_156800 2615 assembly3_WGSMorex_rbca.fasta
ACCAAATTAGGACACACGTGTACGTTTAGACTACAACTAGGTTAATTACTACAGGATCGA
CCAACATAAGATTCTGGCTAAAACACAAACTACTAGTTCGACAAAAAAACCATGTGCCAA
ACATATGAGTTCCAGAGCAAGGATACATTGGTCCTCTGCCCACCGTTGGCCATTGGAAGT
GACACATACGCAAAGCATTAGTAACATGTGTTTTCAGTGACAAATATAATAACACAAAAA
TCAGGTGGCAGATCCAATACTTAACAAAGCAGCATCTATGATATTTTAATGAATAATAAC
TTTCTGTATATGAATACTGTTCAGCACATACATTACCAGTACCAGAAAGTTTAATTACAT
CGCAAACCTGAGGATAAATGTACTTACATGTGTGGTGAGGGTCCTAGGCTGACTAACAAA
TAATTTTGGAACAGAACCTTACTATATTAACACAAGAGCACTAACTTGATTGATTGAGTG
CTACTACCATGAGATGACCATAACATTCTGCAGTCCCACTCAGGAATTTTAGAGTGAGCC
ACAAGTGTATAGCACTGAAAGGGAATCTTCTAACCAAGATAGAGGGTGCGCCCTTGTTTG
TTACCACAGGTATGAAGCACCTGAAACTAATTACATGAATATTTCCCTTGTAGCCCCAAC
GGGAAACTTCAAAATAGCACGAAGTGGAAATTACTGCCAGTTCAATAATTCCCCGTCAGC
TATGATTGGACACTAGTCGGATCATTTTTTATGGGCACTGCAGAAAATTTGGAACAGGGC
ATGCCTTGAGAGGAAAGTAATGAAACCCTGTTGAACTGATCTGCTGCATGTGTCCTGTCC
TACAAATGGGCAGGCAAGTTTACAATCTGGAGCTGAAGAGGAGAATTTGCTGGCTGGAGC
AGCACGCCTGCAGGGGTATGTGCTGAAGCGACATGAGAAGGGTCAGGGGCTAATAAGAAT
CAAGCTCGACTGAAGTTCGACTGCCACTCCTGAGGATGTCGCAAGAGCACCCGTGTTTTG
CAGCCCTGATGGCTCTTTTAAGAGATGTTCATGCAGTTCGATGGAATTAGCTTAAATAAT
TTAGCTTAGTTCCAGTTAACCTAGGTTTGATAAGCCAGGAAGGCGGTAAAAACCTGAAAG
TTTTCAATCGTTCTGTTACATATTTTCTGCTTTCCTTTGGTTGTTGGACCCGTGGTTTAT
TCTGTTACGGAAAAGTACTGGAGCCCTGCTACCAAGGTTACTCTTATGAAAAAAAGGAAA
AATTCCATTACCCTTGCTTGCAAACAGTAAGGTGTTACCCTTGCTTGGAAACACTAAGGT
GTCCCTAATAGTCAGCAGGTTTGGGCACCAACAGTCCAACACATCCCAGAAAGCAAACTA
ATTTTTAGTACAATGTTGGCAATATAAATAATTAAACTCGTTTGTTTTCAAAGCTCAAAC
ACCACATTCTATTGTCACTATAAAGAATAATTCAAAGAAGCAATTGGTCAACAAGCATAT
GAACATATATAGTCATTAATTCATAGATTACCATATGTATACAAATTGATCACTCGCAAC
ACTTATACAATCAATTCACATAGTGCTATAGTAATACCTGATCCAGCAGCAGTAATGGCC
TGACGATACTTCTTATCCTGCACGTCTCCAGCAGCAAAGACCCCCTCCACACTGGTATGT
GTAGAGCCCGGCTTGGTGGCCACATACCCATCGGCATGGAGCTCAAGCTGCCCATTGAGA
AACTTGGTGGCCGGCTCATGCCCGATGGCGAAGAAAAGCCCGGACACCTGAAGGTCAGAC
ACCTCACCAGTCACCAAGTTCTTGACCTTGACCCCAGCTAATGGGCCGCCGCCTGCACCG
CCGTAAGCCTCGACGACCTCCGAGTCCCAGACAACCTGGATCTTAGGATTGGAGAGCGCC
CTAGCCTGCATAATCTTGGAGGCGCGGAAGGTGTTGCGCCGGTGGATGATGTACACTTGG
GATCCGTACTTGGTGAGGAAGTTGCCTTCCTCCATGGCGGAATCACCGCCGCCGATGACG
GCGATGGGCTTGTTCCGGAAGATGGGCGCAGCGCCGTCGCAGACGGCGCAGGCGGAGATG
CCGCGGTTCCAGTAGGTGTCGGAACCGGAGAAATGGAGGCGGCGCGCGACGGCGCCCGTG
GCGACGACGACGGTGTCGGCGAGGACGGTGGTGGAGTCGGAGGTGACGCGGAAGGGGCGG
GCGGAGAAGTCGACCTCGGTGACGGTCTCGGAGAGGATGTTGGTGCCGAAGCGGACGGAC
TGGGCGCGGCAGTTGTCCATGAGGTCGATGCCCATGATGCCGGTGGGGAATCCGGGGAAG
TTCTCGACGTCGGTGGTGGTGGTGAGCTGGCCCCCCGCGGCGATGTCGTTGGCCATCCAG
CCCTCGAAGAGCACGGGCTTGAGCTCCGCGCGGGCCGCGTAGATGGCCGCCGTGTGCGCG
GCCGGGCCGCTGCCGATGATGCACACGCGCGTGCGGAGCGGCGCCGCGGCGGATCCCTCC
ATGGCTGCTAGGCTTGGCTACGGCTGGGGCGGCGGGGGGGGGCGGGCCGGGGTGTCGGGG
GGTGTGGGAAGTGTGTGCTGTGTTGGGTGGGGGGG