morexGenes - Barley RNA-seq Database

Contig contig_1567954
Source Contig contig_1567954
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_1567954 (8968 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_1567954

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_14389	1	752 bp	MLOC_14389.1	Available	Available	None
MLOC_14390	4	3017 bp	AK361243	Available	Available	None
MLOC_14387	1	706 bp	MLOC_14387.1	Available	Available	None
MLOC_14388	1	501 bp	MLOC_14388.1	Available	Available	None
CDS Structure of MLOC_14389

CDS Structure of MLOC_14390

CDS Structure of MLOC_14387

CDS Structure of MLOC_14388

Contig Sequence (8968 bp)

>contig_1567954 8968 assembly3_WGSMorex_rbca.fasta
AACTTGTGAGGATGACCATCTACTTGTTTGTGTTAAATTTCGCATGTTATTGCATTTTGA
TAAATGTTTCACATTGCATTTTGGGCACTGCTGCAGCGGCGCGCGCTGCATTTTTACGCG
CTGTTGGAGCGGAGCGCGCGCGCTGCAAACCAGCTCTACTACTGGAGCCAGCGTTGCGCG
ACGCGCAAAACCAGTCGCCCAGCGCGCTGCAAAAAAATTTTTAGACACGGCGCGAAGCGC
GCTTGGAGATGCTCTAACAATATACCAATCATCCTCCTCGCCGGAGTACTCGGAGTAGCG
TCCAGAACCTATTCCCACAACGAGAGAGATTCACCGCGCCCGCCATTGACTTGGCTACCG
AGGGCTACTCCATAATATACTAAGGGCCAGTTCTTTTGGGGTGCAGCTTATGCATAAACT
GCGATGGGAATAAGCCTCACAGAAGCTGTCATGAAAATAAGTTCATGAGAATAAGTCATC
CAGTTCTTTTTAGACTCCTTGTTTGGCTTATTTCCTCATACTTCCGGTGAATAGTCTATA
ATACCCTTGGGCTACAATTCTGTTGTGATTAAATGATCTGAATTAGATTTACTATTTAAC
AGAACATATCTCACACAGAAAAGAAAAGTGCAAGATCACCAAGATAATTTCTGCATATCC
AAAACTTCAACGGATCTGAAGGTGGATCACTATCAGTAACAGATCAGGATTATTAGAAAG
AGAACAAAATGGCCCATCCAAATCGAAACATCTCCTAGCAAATCGGGAGGATGGGAGGAA
GGAGAGGGAGGGAGTGCAGGTTTGAGCATGAACAGGTGGGGGATAAGATGGAGGTCGCCC
TGGTCCGCAGGTGGTGCTGGATGCGGCTGCCGGAGTGTGGCATCGACCGAAGCAAACAGA
AAGGCTGGAGGCAGATGGGGAAGATCTGCTGCCTAGTGAGGCGCGAGAGGGAGGTGCAGC
AGCGGAGAGTGGCCTAACCGCCGTCCATCTTGGCGGCGCCGAAGGGACGGGCTGAATCGA
CGGAGACCGGCGGCGGCTGTCCTGGGGAGGAACCCTAGCGATGCGAGTGAGACGAGCGAG
CGAGAGAGAGGACGAGGGGATCAAGGGATCTGGCCTCGTGCTGGGTGCGGTGGCATTTTC
TCTGTAAAATGTACAAATAACAATGGCAACAAGATATACCCTTTCATCTTAAGTGGGCTT
CTGCGGGAAGGAGCTCCACCCCCAGCTTATTTTCATTGTGAAGGAGGCCACTGTGAAAAT
AAGCTAAGCCCAAGACCCCCAAACGAGTTCTTCTGGGCTTCTGGCTTATTTTCACGATAA
GCTACCAGAAGCTGCAAAAGAACTGGCCCTAAGTAGATACCAGAACATTGACACGCTGTT
CTAAGTTGACACTTCGATCATTCTCTATTACCTACATCCTCCGTTTCTAAATATTTTAAA
TATAAGTTCTTTTAGAGATTATATTAAAGACTACGTATAAAATATTTTAAATATAAGTTC
TTTTAGAGATTATATTAAAGACTACGTATAAAACAAAATGAGTAAATCTATGTTCTAAAA
TATGTCTATATACATCCGTATATAATTCATAGATAAATGAATCTACACTTTAAAATATAT
CTATATACATCCATATATCAACTAGTGAAACTTCTAAAAAGGCTTATATTTAGAAACCGA
GAGAGTAGTATATAGATGAGAATTAGCAAATCACTTTATTGGGCTCTTCAGTCCTCACTT
GCAAACGTCAATGTGCGCAGCTCATGTGATGAACACTTGGATAAAATTGGGTTAGTCCCA
CACAAGAAAAACTTGCAAATGAGTAATGCAGAACCATATTTAGAGTCAGGGTGGAGACTG
GATGCGTATGAGATTCTGAGCATCCGACGACAATGGCCAGATCATACACAAGACGTCACC
GCTTCAATAATAGAGATACCATGAAGAACCACAAATCACCATACGATGTACAGATATAGC
ATGACCCCGAGTACGCATTTTTTGTATTCTAACACAGCAGACTGCTGCATCTATCCTTAA
CAAATTTCATCCCTTAACCATGCGGCGCCACAGCTCATTCACCGCAAATTAAGCGTGTGA
CCTTGTCTCTGCAGTTCTGCACGGGGAGTGGCTATTGTGCAGCTTTCCAAGAAAAACGCA
CAATCCCCATGCAGGTGTAGCTCCATATCTGGAAAACAGAAACATTGAGAAATGGTCAGA
AGGATGTTCTGGCTCCAGTCCATTGAAGGTTAAAGAAGAATCTGCAACAGATAATGCCCA
AGCCAACCACCCGGCTGAGGTGGACATCCCTATTTCTAAGAAAGAATTCATAGCCAGATG
TTTCAAAGATGCAAAGAGTATGTAACAATCTGGCTCACAGATTTTCTAGTACAGGGCCTT
GAGCATTGTTCTATCTTACTTTGCAGGTTTTGATTTCTTTTATCTTGCCACACATAAAAC
AGGCAATGCAAAGCGATAAATTGCCATTCAACTATATATAACGGAAAAAGATGAGAGCGG
CACACCAACCTAACTTCGTTCCCTGTGCATCAGGCTTTATCCAAATTGTCTAGTTCATCA
CGCGCACTTTGCTTCCGGTAATGAAAATAAAGGAACTGAAAAATAATCTGCAGATATGGT
CAAGGATTCTTCCAATGCAACAACTGAAATCTGCTATGAATTATGATATGGCATATTATG
GTACCACCAACCAGATTCTAAAACATGGGTCTCAGCCATTTTTGGCAAGTAACGTATGTG
ATCCTAAGACAGTCATACTGGAGTATATCGTAGTAATATTTCTACTCATAGTTCCGGTGC
CTTATTTGAGATGATAGCTACAAAGGCAACTCAAGAATTATTCTAAAAGAAAGGCATCTG
AGAACAAAGTCAGTTCGGACCTCTCTTCAGCACAAAGGTTTGCACAGAAACACTATTTTG
AGTTGCAGAACAAGAATATGAGTAACAGTACGAATCAATGGTCCTCAAGGATACGAAAGA
ATCAAGCAAAACACATCCTCCAGCATCTACAAGCCACGGCAGATTTGGTCTAAGTCTTGC
CCAGTCCAAACTATTCACAAGGATACTGCATTGGAAAACAAAGGGATATGAAAGCGCGGC
CAACAAAAGCTGGTTTCAAGAAAAATGAAACATAACATGGTGTGTCCTTGTATTTTATAT
ATGGTATATTAAAAGGAACTGACAAGGGATGCGCCTGCTTGGTATGGAACATGGTAGAAC
AAGTGATTGTTGCAATGTGGGAAAATTTACAGGTTTCTAGACTACATAGCTATACTAAGA
AACATAGCACCCCAAAGGATATCCTTTACTACAGAATACATAATTAGAAGACAAATGCAT
ATAAAGTAACTGAATACTGTTGAACGGATGAAGTTAGGTACATGATTACCTCCCTACATA
TGTCGTATTCCCCACCAAAGCAAAGGTAAACATTAGCGGACTGAGCCCCTGAACAAAGTT
GCAGACAGGTCAAATAAGTTACTAGCATCAGAAAATATATTTAAAACAAAACAAAACAAC
AGAGATCGATGCAGTTAATGCGTCAACTTAATACATTAAGCAATTGAACAGAACCTACAT
ATATTTGATTTCCTACCTAAATAAAATGCTTTTGTCTAGCGAAATTTGTAAGTGTCTCTC
CTGTCAGAAAAATACGATGGGCTTAAAATATCTATGTTTGGTGAAAAATTGACATAGTAC
ATCTCTCCAGTCAGATAAATAGGATAGGAGGGTAGGGTTCTTTTATTCAAACTATAATGA
GATGCAGCAACGATGTGCAGTTTAATGACCAAAGTGATTATAAAAAGTTTAAAAGGATAA
CACCTAAACTTAACACCACATACTAATACAACCATCAAGAATTTTTATTCTTTTGACCGT
GCAACCTTCAAGAATTGAGATCGAGTTACCTCTCTTGCATAATAACCAAAAGAAACATAT
GACAATCAACAACTAGACCGCTATAATTAATTAAAATTCATAGTACGGCAAACACTTATA
AGACATCGACATCCAAGACAAAGTGAGCTAGTAATTCCTCTTAGGGCAAACTGCCTATTT
ATCTATTTTCATAGGGTCCATGTTGGAGACAGCAGGGCAGTCGTTACACCATTCGTGTAG
GTTGCTAGTTATGCGACAAGGAATGCAAAAAATGTTGACAAATGAGAAAAGTGGAAGTGT
CTCCTGTAGTTAAAGCCTGTAGTTAAAAGTTCAAGAAGTTATTGATGAAGATGGAGATGA
ACTTGCCTCGGCATGGCCTCTTTGCATCTGCAGAGTAATAGAGAAGTGTTAGAAATACCA
AAGAGATGACATGTTGCACTATTACGGTTGTAAAGAATTTCTTGAGGTTAACGAATGCTA
TTATTCAGCACCATCAGATGCGCATTTGCAGTAGAAACGAGTAAGAACAGCAGTGACTGA
AACTGAAAGTGTAGTAGATGTTCCCTTGTGTGTCATGCCTTTTACTGACACCTTTTTAGC
TTTCACAAATCACCTCATCCCACTATACATATATGTACCGTATCCAGCACCGAAACTATG
TAACGGAGAAGAATTTCCGGTGACCACAAGAGTGATAAGAAAAAGAACACTCAATTGTTT
ACTGTCTTACATTTAAGAAGATCTGGGGAAGTCGCCCACCCATATAGATAACTGCCATGG
CCCAACCAAGAAAGCTTCCAATTCCACTTCCACTGCCATGGCTCAGAGATGAACCTGCAT
GGTCATCCTATGGTGCAAGAAGAAACTAATCAGATATGCAAATTGAAAACATTGTTCATT
GGTCATGCAAATTGCCTGGTAAACCAAATGCTCTGCCGAAGGCCTGAGACTTGAGAGCAG
CTACAGCTTACCGCTAAAACTAAGAGCTTTCTTCCGACAGGGATGATAATTTCATTGGAC
GCATCTCTTTGTGCGGTTCCAACCAAAATATGCAACACACACATGCCCAAGACAACGGAA
ATCCATGGTACCTGAATTCAATCAATATAAGCTTTTGTAGTTCCAACCTCAATAGACAAG
TATCAACGGGGTGAAAGGTAACGTACCACCAAGAGGGAATTTTTTGTAACAGCAGCTGGT
GCAGACTGTGGAACAGACTCACCAAATAAAGATTCACCTTCGTCGTTCATTTGTGGAGGA
AATTTTGTTGTCTGGCGATTATTCCCCAACCATGTACCCGTAGGCACTGGGCTCCTCGAC
AGAGATCTTGCTGACCTGTAAAACCAACCAGAGCGTTAGATGCTCCTGAAATATTATCTG
ATAGCAAGAGTGCTCTGTCAGCAGGTGAAAATAAAACTGCAACATCCCAAAATAACCATC
AAGGGTGCAGTCACATTGCCTTATTCCATGTAATAGAGCAAACAAACAATATTCAATATT
TATCCAAAGAAGAGAAAAATAGTTTCCTTGAATGAAATAGATTTTCAAAAAAATATGTGA
AATATGATGAGACATTAACAAGCTCAAGAACATTACGCATAGTAGTAGTCTGAGTTGGGG
CTGACTGAACCATGACGTTGCCGGAATACTTCTGTGTTCACCAGGATTGGTGAGCTCGGG
ATAGGAATAGTCGGGCCTGACTGAATATTATTTTTGAATGCCTCGTCCCTATGTCCCAAA
AGCTTCTCACGTAATGAAGCATCCCCGCGTTGATGTTTCTGAGACTGAAATCATAAATTG
TAGTCCAACGGAAGTGAGAGGATAGTTTAGGAAGATGGTAGGAGTCAAAAGGTGTCTAAA
CAATTTTAAGTGAGTCTAGCTTGTGGTAACACTTGAGACTTATCAGCGATTGTATCATAA
CACCATTGGCAATGTATGAAGAACACTAAACTACTTTGCAAAGCCAAGAGCAGGCACATC
ATCAGTTCATGAATCCAGAAATAGGAGTATTGTTCATATACAGTGGTTGCTCCTCTACAA
TTGTTACCGAGGAACCACATCAAGTATCTATTTTGCTAATATTTAGCAAAATGCAACTTC
TTGCAAACATAATGATAATCTTCAATGTTACGGAGTGATCACCTTGGCAGTTGTCCCAGT
TTTCTTTACTTTAAGATGGTAGATGTGGCTATAGTATATTGTCTGTCCAGTGAGAATCAC
AGTTGTGATGGTATATAGCTGCATTGCAAAAATTAAGTTCTGAGATGACAGAAACCACAC
AGAATCGAAGTAACATGAGTAAAAAAAATGTGTCCTTACCAATGCCATGTAAAACTGTGT
TGGCAGCTGCATTAAAAACATAACAAAAAATATTAAATCGAAATGTTCAAATTATAAGGT
GCTTATTTAATCCCACGCATACTTTCTACATCACAACTAAACATGAAGAAGCTGCACACA
TTAAATGCAAGAGGGCTGTATTGGCAAGCATAATCAGGTTTATGTGCAGCAGATGTAAAT
CATTTATATAACATATCTAGATTGTTCTGAAATCTCCCATTTTGAGATACTATGCTTGGA
ACTATAATATTAATGTTCTTATTGAGTTATTCTCCGCTACAGGTAATTTTCTTCACATGA
CTGCATCCAGCATAATTATATTAGCTCTTGCTGGTTGCAGGAACAGTGCAGGCAAGCAGA
AATGATTCGGTTGCTTTTCATATTCATGAATAACACCTCATTACATTGTCCAAACAAAAC
TGCAGACGGATAGTCAATTAAATCAGAGAAAACTACTAGGGTCCTGGGATATTAACATGT
GTAACTGGTGGGTGTGCCTCGCGAAAGAAAAATGTTGTATCTGAAAGAATTTGAGTAAAG
AAAAGAAAAAAATGTTGCAGTAGTGGATCTTACAGTAGCAGGTTCCAGGAAACAGCCAGC
AAGGTTAAACAAATCCCTGCATGATTGCAGAAGAATGACATACACCATTAGATAGAGCAT
TGCGCACGATATGCATATGCAAGTACGATAAGGACGATACAGCATCAATATGCGAGGAAG
GTGGGAAATAAGAAACAACATACCCAACTATCCAGGTCATCAGAAAGGCAATAGAAAGGC
CTTCTGTTGACTTCTGTTTGTAATTTGTGATGATCTGCGGCACCTCGGCGATACCCCAAC
TGAGGACACTAGCCAGTCCAAGACCCAAGGCAACACCATCCTTTGTGCTGCACAGGCAGT
ACTTCAGATAGACTTTAGCCCATTCCGCGCAATGCGGAGCTGATGGGCAGCTCGGAGGAG
GCGTTCCACTGAAGATACCCATTTGAGTGTGCGCTCAAACCTGAGGAATAATTGCACAAA
ATATGAGCGTCATAGAAAGGATGTGCTGTCAATTTGATCTTCTCATTTGAACAAGGAAAT
ATTCTAGTGTAATTAGCAACTTCTTATTTCCGTTATGAAATAGTACCATATAGGCATATG
TGAAGAAAATGCTTTCCATTTTTTACTTGAAATGCGTGAAGCAAAATTGAATAGTTGTCT
AAATTTTAGCTCAAAATATGGGGGAGAGAAAACTGTTCCATCCCTAAAAAAAGAAACAGA
TGTGATGGAAGTTCAGAGACAACAGCTAAAAGAGAAGAATATAATAGAGAATAGTATGGA
AAGAATATTCAAAAGTAAAAGGAAGAGGTTCTAAGAAAGATCGAGGAGAAGAGAGAAGAT
CCACTTCCCGCATGTTGCAGTTTGCTTTGTGTATAAGCATTTCAACATTACTGTAGAAAG
CTGAATTAGAAAATGAACTGAATTTTGAAAAAATTATTGATAAGGACTTGAAGATACAGG
TGGTCTTCATTCTCTTCTCCTATGTCCACACGAACCACCTACGCAAACAGCCAAAAACAC
GAACAAAATCGCTGTGTCCGTTCTTTCTCTCTCCGTCTCTCAGTTTATCTATTATCCCCA
TATTCTCCGCCGCCAACCAGAAAAATGCTGCGGATCCATAGTTCAAATAATCGCATCAAG
AAACGTAAAAATTGAAAGACCCATCGGCGAGGCACGGGCACAGCCCAGTTCAATCGAGAT
ACCGTCCCCTCTCGTCTCAAAATTGCATCGATTCGCCAGCGAATCCGCGTCCCCGTTCTA
GCAGTCAAACGGCAACGCGTCTCCGCCACTAACAACCTTAAAAGCGCCGCAAGAAAGAAG
AAGAAACCTAAAGCCGGCGCGACGTACAGGCAGGAAGAGGCAGACGGCTGAATCGGGAGT
AGGGCTACTCAATCTCGTCAGACCGATGGACGCAGCCGCCAAGAAGCGAGCCCCGGCCGG
AACACGGCATTGTCGGTGGACATTCACGAGGCGGCGGCACGATTTGAAGAGAAGGCGTCG
CAAGGGAAGGAGGGGAGGTAGTTCGTACCAGAGTTGTTCGTCCTGTTGCCGAGGAAGCGA
ACGAGAGAGAGAGGGAGAGTTGGAGTTGGAGTTGGAGTTGGCGAGGCGAAGACGGGAATC
GAAACCGAGAGGAGAGAGGCCGCGAGATTTTATCGCCCGCTCGCCCTCGCCGCCGCTTCT
TGGCTGTGGTGTGGGTGGCTGGTTCTCGCGAGACCGGGATGCCTATTTTGGCGGGTTGCC
ACCGTGCCCTGCCGCGGCCGCGTGGCACCGCTCGCTCCGGCTCCGGCTCCCTGCTGGCCC
GGGACTCGCGACTCGTGAGCCGTACGTTCGCAGGTTTTTTCCTTACTCTTGTCGAAACGG
AAACGGAAACGGAAACGTGAAGTCGTCCACACGAGTTACAGCTACAACCTCGGTACCCCG
GGCGCGTACGTCTCAATCATACTGACACGATCAAAACATTTTTTTAAGAAAAAAAGTTTT
CTTAAGAAAATGATTATAATCATCTGACCGATTTTATGCCTCGCGTTAAGAGCCAATTAC
ATACGGGCACTGCTAGGCGCCGGCGTGCCGGCCCGAGGGCTCGCGCCGGTCGCACAGCAA
CCGTCAGATCAGGGGCTCCCTGACCATCAGGTCTCGTCACGCGAGCCCCCACCGCCCGCC
ATCCTCGCACGCGCCGCCGCCCCAGCAC