Contig Data
morexGenes
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Map Locations of contig_1567921 (6991 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1567921

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_14372 3 2882 bp MLOC_14372.1 Available Available LOC_Os06g29310.2, FRAME:+2, EVALUE:5e-88, 13106.m03027 protein ulp1 protease family protein, putative, expressed
MLOC_14373 1 246 bp None Available Available None
MLOC_14374 1 956 bp MLOC_14374.1 Available Available None





CDS Structure of MLOC_14372






CDS Structure of MLOC_14373






CDS Structure of MLOC_14374






Contig Sequence (6991 bp)

>contig_1567921 6991 assembly3_WGSMorex_rbca.fasta
GCTTCTGGCTTTGCTTGTGTGCTAGTTCATTTTTAGAATCAGATTCTAGGAAGCTAGATA
AGAATTTGGTGTGTTTGTTTCAGATTCTGATTTTAGAAGGCCTAGAATCTGAGAATCAGA
AGCTGCAGCCCAAACAAAGGCCACCTAATACTTCCTAACAATTTCTACAGTTGCTATGTT
CTATTCTAGTACATAACTGCCACGACTAGGTTACGTAGGGTAGGCCATGGCAGGCGTGAC
AATAACCCGTACCGTGTTTCCTAGCTGAGCACCTAGAAGGCTAGAACAACGAATATGCTT
GATGCTTCTCTTGGACAAGTGTGATATGTTGTAGAATAAGAAATAATTTTCTTATGGAAA
TGACGGACTGCTGTGCATTCAATTAAGGAAAATAATGCCTCTTATCCATACAGTGCCACA
CAAAAAAAATGCATTCTTATCCACTGCCCATTCAGGCACAGGAAAGGCTGTTATGTCTAA
GAATATGAAAATCTTTGTCTTAATTTAAGGCTTATTGAGTATTAGGTTCTTCGTTGCCCC
TTGTCCGAGTGCAGCATGTCATGAACAGAGCTTTTTGGACTGTACTGCCTGTGCAAATCT
ATAGTACAACTGTACAAGGATGAAAGCACACACATAAACCTCAGACCAAGAAGTGTAGAG
GGAGGGAGGGTAGCAGCAGCAGCAGCTGTCAAATGCACACATCAGCAGTAGCACAAAGCA
GAACACCTCGCTTCTCCTAACCGTAGAGCAGCAAGGAAACAGTCTCGGGCATCCTCTTCT
CAACCAAACAGGCAAACAGCAAAGCAGCGACATGCAAATAGCCAACATCATAGGTAGTCC
CAAGGAAACAGGAGTGCATCCAGAAAGCGTCTCAGACCAGCATGCGAACTGCAACGACCA
AAGATGTCGCTAGTTGGCAGGGGCTGATGAAAGAAGGAACTGGCGGCAGAAAGAAGCATA
TCTAATTAAACAGCCAATTGGTCTTATTATCTGAAATCAGTAAACTGCAAGCTGAAAGTT
AACAATACCATTTTATCTGACTGAACACCATCGATCAGAGACGTGGCTTGTTTGCAGTGG
CTGATGGAAACAGGAACTGGTGGTGCTAAGAAACATATCTAACTAAACAACCAGTTGGTC
CTTATTATCTAAATTAGTAAACTGCAAGCTGAAAGTTAACAATGCCATTTCATCTGACTG
GATGGTTGTGCTTAAATTTACAAGGCATGTATCCACACAGCGGAAGGTACATGAAATTTT
TACAAGGCATGTACCTACACAGCGGAAGGTACATGAAATTTTTACAAGGCATGTACCTAC
ACAGCGGAAAGTACATGAAATACAAAAGGGTTAAAAAAACTGCATTTAGGTTTTACTATT
AATCTTTTATCCGTCGGGTAACATCGATGATGTGCGTTGTTAAGTACCTTTTCGTAGTAA
ATTGAAGATTTGATGTTTATCTCAGCTGTAAACATGTGGTCGTGTCTTATATATTCAACT
CATTTTGCTTTCTTATTGTGAAGGAAGACAAGTGTTCTTATTTCTTAAACCTGAGAAGAT
GGTGGAAAGGCATAGATATATTTCAAATGCCATATATATTATTTCCTGTGCATGCAGAGT
AAGCAATTTTGTTGTCTCTTTCGCTAAGATACATTACTTTAGATTGGTATTGCTTTTACT
TGTAGGGTTATACATGTTTTATAGAACTTCACCTCATGTGTATTTTGATAAAATGCAATT
GAGTTTGAAGGTGGAAATTTACATGTTTATAGAATATTGTATATATTGTATCTTTTGAGA
TTCTTATAACTTCTACTCATGGTTTCCACGTTTTTTTTAATGTAAGGATGATTTCTACGG
ACATTTTGTTGTATCACAGCAAACGTCACTATCAGTTAGCATTTTGAAAATACGTTCCTG
GCTGGTGAATCTATGTGCATGACAAACCATGATATTGTTTCTCGAGATTCTGATTTGCCA
TGCCTAGGACAGTCATTCCGAGGCAGAGCTATAGAAGCTGATAAAATCTGGTTCCTGTAT
AACAAGCCAAATGCTGGATATGGTATATTGGCAGATTTGACAATGGGTTAATGTCAGTCT
TAGCTTATACCATAATTAGCTATTACATATCGTGCTCTGAGATTGAGCAATTCCGCAAGA
TTACTGGTGATATTTACCAAGTCATATCTTTATGAGGAAATCTGGGAACTGGCTGGTTTC
TGTTTCTAGCAAAATTGTGGGGACTGCTGGAACGCTGGTCATAACGAAGTAGATGCTATT
GTGCTTGTTTTTTAGTATATAAAAACGAGACCAACAGGGGGAGGAGCCCCTGCGGCTTTT
TAATTAAGAAAAGGGTGTGAGACATACATTCAAACTCATGGGCTTGAACCCACGCCGGCA
GTGGACCACTGCGCTCCAATCACTGGGCTAAGAGCCCATCCATGCTTTTTTTTAGTTTCA
GTTGATACTTGCAGACCTAAGAGTGGATGTTTATAGAGAATAAGGCGTGCACATATTTCA
AAATTAAACTTTGACATAGATTAGACTAATCAAATGTATATTACAAAAAATATCTCGTTG
GATTCGTATTCGAAAGAAGTTTCAGTGATATAATTTTTAAGTCACAAAATAATATATTAT
TAGTCTGCTTTATGGTCAAAGTTGGATTTTGGGATGCGTGCGTACCTTATTCATCGGAAT
GGAGGGAATATATATTTGTTGTAAATGCTAGGAGGGAGCTGTCTGTAAAAGGTAATTTGT
ATTCCTATGTTGCCTGACTGGATTCAAAACTTCACTGCAACATGACCTGATCGTTGATGC
ATATTTTGACCACATATGCTAGACTTATGCGTTACGTCAATATTCTGTTAAAAGGCTCAG
GATGTTTTGTTTTTGTTCCAAATGTTCAGTACCCATTGGAGCCTGGTGATTATATGCATG
CCAGCAAAGGAAGATCTATCAGGCCCCATTATACTTCATTTGGATTCACTGAAGTTCCAT
AGCAGCAGATTGATTTTCAGTGTTGTTGAGAGGTAAGTAAGCAGTCTCAAAAGTCAAAAG
AGTTGATGAGTTGTACTGCTTTGTTTTGGCATTAGGCTTTTATTTGTGCAACATAACGAC
ACAAATGGGATACAGCTACTTTGTTTCCTCTATTCTTTTCATACAACAGACCCGAAGTGG
TCGGACCCTTCTCCATACCCTGCGTAAGCAGGAGCTACATGCACCGGGCTGCCCTTTTTA
TTAAAGTATCATTTATTTCATACATTTTTGCATTAGAAGTATATCTTCTGGAAAGTAGAC
ACTATTATTTTGGCATGCCATTACTTTTCTTGTCTAGGGTGTCAAAATTTCGTGATATCC
TCACCTTCTCAGTTTTCTGCTGTATTATTTTCATTGTATTCTAAAATTATGTATGTTCAT
TTGTAGATTCTTAAAACAAGAATGGAATTACTTGAAGGAAAATGGTTCTTTAGCAGAATG
TCCTATACGAGAAACGGTGTGGAAGAGCCTTCCTCGTAAAATTGAGAAGAAATCAATTGC
GGTAACTTAAGATCTTTTTATGAAATGCGTGTACTGAGATGTGTGCTTTGAGGTTAGCTT
TAGCTGATAGAATGTACCTATTATAGCATCCAACAGTTTGTGCATTGCTGTGTCCATTTC
AAATCTGAATAACAAAACCATTATTAGATTCAGTCACTCAGGAAAATAGCATCGGACCAC
CTGTGATTTTCATTTGCGTATTGACAACCTCTTGGAATTTTTGTTACTGTTCATACTAGT
GAGTAATTTTTTAATAGCATGTATTGTGGCCGAGAAGGTATTATTTGGTGCCCAGGCTTA
GCTGCATCCGCGATAAACAGAACAAAAAAAAAATAATAGAAAAATTCAAAAATATCCGTT
TCTTTTTGCATGGAAGATAATTTGGTGCTTGAGGTGCGCTCCAAATTTCAGATCATTTGG
ACATTTGAGTAGCTCTCGGCAAAAAAGACAAACTTGGGGTCTGTGAAAAAGTTTACTGTT
CATGTCTTGTTTTGACCCAATTTGTCTTTTTTTTTTGCTGAGAGCTACTCATATGTCCAA
ATGATCTGAAATTTGGAGCGCACCTCACGCACCAAGTTATCTTCCATGCAAAAAAAAAGA
ACCCTGTACATTTTTGAACTTTTTAAGTTTTTTTTGTGAATTTTCTCTCCACCGGGTGCA
GATGAGATTGGGCTCAGAAATGGATACAACAACAACAACAACAACAAAGTCTTTAGTCCC
AAACAAGTTGGTGTAGGCTAGAGGTGAAACCCATAAGATCTTGCGATCAACTCATGGTTC
TCGGCTCAGAAATAGATATTTGAATAAAAGCATGCTGTAGAATTTATCTCTAGCAATTAA
TATTTGCATGCCTCTATAATTATGGGGTGATTAATATTCATAAGAAAACATGTGACTAAT
AGATGACATCTAGATACAATGAAGAAAAGCATCATAGGCATGAAAATATCATCTCTCTTT
AGATAAAAGAAGGCACACTCTTTCTTTCATTTTTCTCTCTTCCAACTCAGCATGCTGACA
TCATCCCATTGTGCGTGGCCTAAGACAACAGGTGTGATGTTGCATCAAGTTACAAGTACA
GGCTGTAAATTGCTAAATGCATGCATGCAGTGATTTATGAGTTCAGGATATTGTCAAAAT
GAAATTTTGGGTGGGCATCCAGATTTCTTATAAGTGAATGCCCATTGTTGCTTACATATG
CTGTTATAACATGTGCACTATAGATGGTGTATTTGTCTCTCCATGCTGTGATCTTATAGC
TCTTACTCTCTTCATTTTTTTCCAGGTTCCGCAGCAGGAAAATGAATTTGACTGTGGCCT
CTTTGTTCTGTACTATATGCAACGGTTCATTGAGGAGGCACCTGAAAGGCTTCGCAAGAA
AAACCTTTCTATGGTGAGCCACTATCTGTTAGTGTGTTGACCACTTTACGTTATGTGTTT
TTGACTGTAGAATACTGAACTGCACGCAGATGTTTCTTGCTCATTTCTTCTCTATTTTTT
TTTCTGTTAGTTTGGCAAAACATGGTTTCAACCTGAAGAGGCTTCTGCATTACGAAAGAA
AATGAAGACCCTGCTTCATCAGTTGTTTGAGGAAGCGAATCCCAGTAACAACAGTACATC
GGAGCAGACAGCGTGTCAGTTGCTTTTGGAAGCTAAATCTGCAAACAATGTAATGGAGCC
GGCAACGTCAGAACACCCTTTGGAAGTCGGTTCAGGTTCAGCTGAGGTGGCACCAACGTC
TGAACGCCCTTTGGAAGTCGGTTCTGCTGAGATGACACCAACGTCTGAACACCCTTTGGA
AGTCAGTTCTGCTGAGATGTCACCAACGCAAGAACATCCTTTGGTGGGCAGTTCGGCTGA
GATGACACCAGTGCAAGAACATCCTTCGGTGGGCAGTTCGTCTGAGATGACACCAGTGCA
AGAACATCCTTTGGTGGGCAGTTCGGCTGAGATGGAACCAGTGCAAGAACATCCTTTGGT
GGGCTGTTCTGGTGAGATGGCACCAGCGCAAGAACATCCTTTGGTGGGCAGTTCGGCTGA
GATGGAAACAACGCAGGAACATCCTTTGGCGGGCAGTTTGGCTGAGATGGAACCAACACA
AGAACATCATATGGTCGGCAGTTCGGCCGCGCAGAAACCTTTGGAAGGCACTTCGAACCG
ACCAACAAGTTTTGAGCACCCTTTGGAATGCAGCTGATTGATGTTACCACCTTTGGAGCG
ACTTACGTTGCCCGTAGAAACCGGCTCGGAATTGTGTATTATAACCGGGAAGGTGTTGTA
GCCTGCATCTGTAGGCAACTTTGAGGAAGGGGTGGTGTTGCATAGCTGAACGTTACAGTT
AATGTATCCACGGGAGCTTCCGTGTATATAAAATATCAGTAGGAAAACTGGTGGGTGTAT
GACGATATGAGTCGCTCAGGGTCGGCTTAATTTGTTGTTTAGTTTTTTTAGCCAGGCTGG
GAGAGCACAATCTAAGGCTCTGATTAGACCATGTTTTTCAAGCCAGTTGGCGAGTTGCCA
TGTTCCGTGTTCTTTAGTTCTGCAAACACTTATGGATTTTACGTGTTGTGCCAAAGGGCG
CAAGCAGGTGTGGAGATGAGCAGGTTTGTAGATTATAAGTACCAGATCTCGCCCTGAAGC
GTTAAGAGTTGATCTACACGGTTGTTTAGTTACACAACAACACATTCGCCTACTTGCGAC
TTAGGCCTCCTCGTCCTTCCTCAACCAGTTCGATCGGACATGACCAGGAACGCGCCGGCA
ATTTGCGGCTGCCCAGCCATCCGTGTGCCGACTGATACGGCGAGATAAGTCGAGGTTAAC
TGGATTTGGGGATTTTAATCAGTGGACACACGCACACAAATTTGTGGTTTGTAATCTGCA
GGGATATAGAAAAGCGAGGACGTTTTGAGCAGCTTCATTCATGAAAAACGAGCGTGCCTT
CAACGTCGCAGCAAAGAAGGGGACTCCAGCCTGAAGACCATGGCGTTTCAGTCTGCCGGA
GCCCACAACCAAGCATAGGGGTAGGAGGAGATCGGATCCCCCTGCCGGAGCCCACAACAT
AGGGGGAACCACTTCCTCGGGACGTCGTTAAGGAGCACAGTAGAGTGAGAGGACCGGAGA
TTTTTATCCATCCAGTCACACCACAGCGTGGGAAACCACCGCGCGAGCATGATCGTCCAC
ATACTCGCCGAGTTGATGCAGTCAAAGGCTTTGTCGAAGTTACACTTGAAGACAAGCGTG
GGGGCAGCCCGCTTAAAACATCACTACACCATTTTCGAGGCGTGGACGAAATTTTCACCA
ATGCTGTGCGCGGGGATAAACCTGGACTGGTCCTCGTCGATGGTCTCACAGATCTGCAGC
TGCAGCCGCGAGGTGAGCCTGCGCCAGAGAGTCTTGATATCCGTGTTTTGGAGAGAGACA
GGTGGAAGGAGGTGGATGTCGCCTAGAGGGG